BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf028o12 (1684 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056248.1| Oryza sativa (japonica cultivar-group) Os03g... 367 1e-97 dbj|AK066437.1| Oryza sativa (japonica cultivar-group) cDNA clon... 367 1e-97 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 192 3e-45 gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 192 3e-45 gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare str... 192 3e-45 >ref|NM_001056248.1| Oryza sativa (japonica cultivar-group) Os03g0276600 (Os03g0276600) mRNA, complete cds Length = 1303 Score = 367 bits (185), Expect = 1e-97 Identities = 341/393 (86%) Strand = Plus / Plus Query: 1079 ttcatgtgtctacattgattcctctgggagcagccataatattgagttggataattttga 1138 ||||||||||||||| ||||| ||||||||||||||| |||| |||||||| ||||| Sbjct: 772 ttcatgtgtctacatagattcgcttgggagcagccataaagttgatttggataactttga 831 Query: 1139 accaccaaaggcagatctgctattgccattctcagcaaaaattgttgatggtatcaaccg 1198 ||||||||| ||||||||| ||||||||||||| || | ||| ||||||| |||||||| Sbjct: 832 accaccaaaagcagatctgttattgccattctctgcgaggattattgatggcatcaaccg 891 Query: 1199 gagtgacccaagacggagagcacttatacttttctgttttgagtattttaatgtgaccgc 1258 ||||||||||||||||||||||||||| ||||||| || |||||||||||||| || || Sbjct: 892 gagtgacccaagacggagagcacttatctttttctgcttcgagtattttaatgtcactgc 951 Query: 1259 aagagacgcactcttgctctctattgatcaccatggatttgatgttgtcgccaaggtccc 1318 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 952 aacggacgcactcttgctctctattgatcaccatggatttgatgtgctcgccaaggtccc 1011 Query: 1319 tgaaagagtaacccctcttgatgtccctcaacagtaccattggaaagagttcaggttcac 1378 ||||| || | | ||||||||||| | ||||||| |||| |||||||||||| | Sbjct: 1012 tgaaaaagcagtgctccttgatgtcccacgacagtacgtctggagagagttcaggttttc 1071 Query: 1379 attcaaggaagcagccaaggatgtcaaggacttctgccgcatgctggttgagttagaaga 1438 |||||| ||||| ||||||||| | ||||||||||||||||| |||||||||||||||| Sbjct: 1072 attcaaagaagctgccaaggatattgaggacttctgccgcatgttggttgagttagaaga 1131 Query: 1439 agaagctctacagagcgtaaagagctacagcgg 1471 ||||||||| ||||| | |||||||| ||||| Sbjct: 1132 agaagctctccagagtatgaagagctatagcgg 1164 Score = 192 bits (97), Expect = 3e-45 Identities = 313/385 (81%), Gaps = 5/385 (1%) Strand = Plus / Plus Query: 685 catttcgtcgagcagttggtgcgcgcgccgagcgggagcgggggccatggccatggcgaa 744 ||||||||||||||||||||||| |||| ||| || | ||||||||| |||||||| Sbjct: 198 catttcgtcgagcagttggtgcgggcgctgag-----gcagaggccatggcgatggcgaa 252 Query: 745 ggccaaatccgtcgctctctccgtcaccgacaagtgcaggaacatcttggccgccagttg 804 |||||||| | | || || || ||||||||||| |||| ||| || || | ||| Sbjct: 253 ggccaaattgatttccctatctttcgccgacaagtgccggaatatcctgtgtgcaaattg 312 Query: 805 ggaaacccacctcaacaccatcaaagccgacgccaagggaagcaaaggggagatttacac 864 |||| | ||||||||||| |||||||| ||| |||||||||||| |||||||||||||| Sbjct: 313 ggaagcgcacctcaacactatcaaagctgacatcaagggaagcaagggggagatttacac 372 Query: 865 gtcgagggtgcactacatggtccaaaagggcactccctacttgatcgtccctgagaatca 924 || |||||||||||||||||| | | |||||| |||||||||| || || || | | Sbjct: 373 atcaagggtgcactacatggtcgagaggggcacgacctacttgattgttcccgaagacga 432 Query: 925 catgcacaacattaacattataatcgatgagcgggggtctctctcagtgtgcagcccaat 984 || ||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 433 caggcacaccattaacattgtaatcgacgagcggggatctctctcggtctgcagcccaat 492 Query: 985 cccaggtcgcctcacaagcttgctcaagtcactcaacaagttgcctcctcgggttgctat 1044 |||||| ||||| || | |||||||| |||||| |||||||||||||| | ||||| Sbjct: 493 cccaggccgccttactaccttgctcagatcactcgggaagttgcctcctcgaatcgctat 552 Query: 1045 gaccggtgatgtcctgcgcatgaaa 1069 ||| |||||||| ||| ||||||| Sbjct: 553 gactggtgatgtgctgttcatgaaa 577 >dbj|AK066437.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067M23, full insert sequence Length = 1304 Score = 367 bits (185), Expect = 1e-97 Identities = 341/393 (86%) Strand = Plus / Plus Query: 1079 ttcatgtgtctacattgattcctctgggagcagccataatattgagttggataattttga 1138 ||||||||||||||| ||||| ||||||||||||||| |||| |||||||| ||||| Sbjct: 773 ttcatgtgtctacatagattcgcttgggagcagccataaagttgatttggataactttga 832 Query: 1139 accaccaaaggcagatctgctattgccattctcagcaaaaattgttgatggtatcaaccg 1198 ||||||||| ||||||||| ||||||||||||| || | ||| ||||||| |||||||| Sbjct: 833 accaccaaaagcagatctgttattgccattctctgcgaggattattgatggcatcaaccg 892 Query: 1199 gagtgacccaagacggagagcacttatacttttctgttttgagtattttaatgtgaccgc 1258 ||||||||||||||||||||||||||| ||||||| || |||||||||||||| || || Sbjct: 893 gagtgacccaagacggagagcacttatctttttctgcttcgagtattttaatgtcactgc 952 Query: 1259 aagagacgcactcttgctctctattgatcaccatggatttgatgttgtcgccaaggtccc 1318 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 953 aacggacgcactcttgctctctattgatcaccatggatttgatgtgctcgccaaggtccc 1012 Query: 1319 tgaaagagtaacccctcttgatgtccctcaacagtaccattggaaagagttcaggttcac 1378 ||||| || | | ||||||||||| | ||||||| |||| |||||||||||| | Sbjct: 1013 tgaaaaagcagtgctccttgatgtcccacgacagtacgtctggagagagttcaggttttc 1072 Query: 1379 attcaaggaagcagccaaggatgtcaaggacttctgccgcatgctggttgagttagaaga 1438 |||||| ||||| ||||||||| | ||||||||||||||||| |||||||||||||||| Sbjct: 1073 attcaaagaagctgccaaggatattgaggacttctgccgcatgttggttgagttagaaga 1132 Query: 1439 agaagctctacagagcgtaaagagctacagcgg 1471 ||||||||| ||||| | |||||||| ||||| Sbjct: 1133 agaagctctccagagtatgaagagctatagcgg 1165 Score = 192 bits (97), Expect = 3e-45 Identities = 313/385 (81%), Gaps = 5/385 (1%) Strand = Plus / Plus Query: 685 catttcgtcgagcagttggtgcgcgcgccgagcgggagcgggggccatggccatggcgaa 744 ||||||||||||||||||||||| |||| ||| || | ||||||||| |||||||| Sbjct: 199 catttcgtcgagcagttggtgcgggcgctgag-----gcagaggccatggcgatggcgaa 253 Query: 745 ggccaaatccgtcgctctctccgtcaccgacaagtgcaggaacatcttggccgccagttg 804 |||||||| | | || || || ||||||||||| |||| ||| || || | ||| Sbjct: 254 ggccaaattgatttccctatctttcgccgacaagtgccggaatatcctgtgtgcaaattg 313 Query: 805 ggaaacccacctcaacaccatcaaagccgacgccaagggaagcaaaggggagatttacac 864 |||| | ||||||||||| |||||||| ||| |||||||||||| |||||||||||||| Sbjct: 314 ggaagcgcacctcaacactatcaaagctgacatcaagggaagcaagggggagatttacac 373 Query: 865 gtcgagggtgcactacatggtccaaaagggcactccctacttgatcgtccctgagaatca 924 || |||||||||||||||||| | | |||||| |||||||||| || || || | | Sbjct: 374 atcaagggtgcactacatggtcgagaggggcacgacctacttgattgttcccgaagacga 433 Query: 925 catgcacaacattaacattataatcgatgagcgggggtctctctcagtgtgcagcccaat 984 || ||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 434 caggcacaccattaacattgtaatcgacgagcggggatctctctcggtctgcagcccaat 493 Query: 985 cccaggtcgcctcacaagcttgctcaagtcactcaacaagttgcctcctcgggttgctat 1044 |||||| ||||| || | |||||||| |||||| |||||||||||||| | ||||| Sbjct: 494 cccaggccgccttactaccttgctcagatcactcgggaagttgcctcctcgaatcgctat 553 Query: 1045 gaccggtgatgtcctgcgcatgaaa 1069 ||| |||||||| ||| ||||||| Sbjct: 554 gactggtgatgtgctgttcatgaaa 578 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 192 bits (97), Expect = 3e-45 Identities = 181/209 (86%) Strand = Plus / Minus Query: 1263 gacgcactcttgctctctattgatcaccatggatttgatgttgtcgccaaggtccctgaa 1322 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9343833 gacgcactcttgctctctattgatcaccatggatttgatgtgctcgccaaggtccctgaa 9343774 Query: 1323 agagtaacccctcttgatgtccctcaacagtaccattggaaagagttcaggttcacattc 1382 | || | | ||||||||||| | ||||||| |||| |||||||||||| ||||| Sbjct: 9343773 aaagcagtgctccttgatgtcccacgacagtacgtctggagagagttcaggttttcattc 9343714 Query: 1383 aaggaagcagccaaggatgtcaaggacttctgccgcatgctggttgagttagaagaagaa 1442 || ||||| ||||||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 9343713 aaagaagctgccaaggatattgaggacttctgccgcatgttggttgagttagaagaagaa 9343654 Query: 1443 gctctacagagcgtaaagagctacagcgg 1471 ||||| ||||| | |||||||| ||||| Sbjct: 9343653 gctctccagagtatgaagagctatagcgg 9343625 Score = 107 bits (54), Expect = 1e-19 Identities = 63/66 (95%) Strand = Plus / Minus Query: 7 ctcatcgccgccttctcccgcgccgccctcccccgcctcgccttcccgctcctccgccac 66 |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 15851346 ctcatctccgccttctcccgcgcctccctcccccgcctcgccctcccgctcctccgccac 15851287 Query: 67 ctcctc 72 |||||| Sbjct: 15851286 ctcctc 15851281 Score = 101 bits (51), Expect = 9e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 1162 tgccattctcagcaaaaattgttgatggtatcaaccggagtgacccaagacggagagcac 1221 |||||||||| || | ||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 9344108 tgccattctctgcgaggattattgatggcatcaaccggagtgacccaagacggagagcac 9344049 Query: 1222 ttatacttttctgttttgagtattttaatgt 1252 |||| ||||||| || |||||||||||||| Sbjct: 9344048 ttatctttttctgcttcgagtattttaatgt 9344018 Score = 85.7 bits (43), Expect = 5e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 1079 ttcatgtgtctacattgattcctctgggagcagccataatattgagttggataattttga 1138 ||||||||||||||| ||||| ||||||||||||||| |||| |||||||| ||||| Sbjct: 9344325 ttcatgtgtctacatagattcgcttgggagcagccataaagttgatttggataactttga 9344266 Query: 1139 accaccaaaggcagatctg 1157 ||||||||| ||||||||| Sbjct: 9344265 accaccaaaagcagatctg 9344247 >gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 192 bits (97), Expect = 3e-45 Identities = 181/209 (86%) Strand = Plus / Minus Query: 1263 gacgcactcttgctctctattgatcaccatggatttgatgttgtcgccaaggtccctgaa 1322 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 43112 gacgcactcttgctctctattgatcaccatggatttgatgtgctcgccaaggtccctgaa 43053 Query: 1323 agagtaacccctcttgatgtccctcaacagtaccattggaaagagttcaggttcacattc 1382 | || | | ||||||||||| | ||||||| |||| |||||||||||| ||||| Sbjct: 43052 aaagcagtgctccttgatgtcccacgacagtacgtctggagagagttcaggttttcattc 42993 Query: 1383 aaggaagcagccaaggatgtcaaggacttctgccgcatgctggttgagttagaagaagaa 1442 || ||||| ||||||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 42992 aaagaagctgccaaggatattgaggacttctgccgcatgttggttgagttagaagaagaa 42933 Query: 1443 gctctacagagcgtaaagagctacagcgg 1471 ||||| ||||| | |||||||| ||||| Sbjct: 42932 gctctccagagtatgaagagctatagcgg 42904 Score = 101 bits (51), Expect = 9e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 1162 tgccattctcagcaaaaattgttgatggtatcaaccggagtgacccaagacggagagcac 1221 |||||||||| || | ||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 43387 tgccattctctgcgaggattattgatggcatcaaccggagtgacccaagacggagagcac 43328 Query: 1222 ttatacttttctgttttgagtattttaatgt 1252 |||| ||||||| || |||||||||||||| Sbjct: 43327 ttatctttttctgcttcgagtattttaatgt 43297 Score = 85.7 bits (43), Expect = 5e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 1079 ttcatgtgtctacattgattcctctgggagcagccataatattgagttggataattttga 1138 ||||||||||||||| ||||| ||||||||||||||| |||| |||||||| ||||| Sbjct: 43604 ttcatgtgtctacatagattcgcttgggagcagccataaagttgatttggataactttga 43545 Query: 1139 accaccaaaggcagatctg 1157 ||||||||| ||||||||| Sbjct: 43544 accaccaaaagcagatctg 43526 >gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 192 bits (97), Expect = 3e-45 Identities = 181/209 (86%) Strand = Plus / Plus Query: 1263 gacgcactcttgctctctattgatcaccatggatttgatgttgtcgccaaggtccctgaa 1322 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10253 gacgcactcttgctctctattgatcaccatggatttgatgtgctcgccaaggtccctgaa 10312 Query: 1323 agagtaacccctcttgatgtccctcaacagtaccattggaaagagttcaggttcacattc 1382 | || | | ||||||||||| | ||||||| |||| |||||||||||| ||||| Sbjct: 10313 aaagcagtgctccttgatgtcccacgacagtacgtctggagagagttcaggttttcattc 10372 Query: 1383 aaggaagcagccaaggatgtcaaggacttctgccgcatgctggttgagttagaagaagaa 1442 || ||||| ||||||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 10373 aaagaagctgccaaggatattgaggacttctgccgcatgttggttgagttagaagaagaa 10432 Query: 1443 gctctacagagcgtaaagagctacagcgg 1471 ||||| ||||| | |||||||| ||||| Sbjct: 10433 gctctccagagtatgaagagctatagcgg 10461 Score = 101 bits (51), Expect = 9e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 1162 tgccattctcagcaaaaattgttgatggtatcaaccggagtgacccaagacggagagcac 1221 |||||||||| || | ||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 9978 tgccattctctgcgaggattattgatggcatcaaccggagtgacccaagacggagagcac 10037 Query: 1222 ttatacttttctgttttgagtattttaatgt 1252 |||| ||||||| || |||||||||||||| Sbjct: 10038 ttatctttttctgcttcgagtattttaatgt 10068 Score = 85.7 bits (43), Expect = 5e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 1079 ttcatgtgtctacattgattcctctgggagcagccataatattgagttggataattttga 1138 ||||||||||||||| ||||| ||||||||||||||| |||| |||||||| ||||| Sbjct: 9761 ttcatgtgtctacatagattcgcttgggagcagccataaagttgatttggataactttga 9820 Query: 1139 accaccaaaggcagatctg 1157 ||||||||| ||||||||| Sbjct: 9821 accaccaaaagcagatctg 9839