BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf028o03 (934 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060744.1| Oryza sativa (japonica cultivar-group) Os04g... 791 0.0 dbj|AK071792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 791 0.0 gb|AY107396.1| Zea mays PCO072559 mRNA sequence 521 e-144 emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 268 4e-68 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 268 4e-68 >ref|NM_001060744.1| Oryza sativa (japonica cultivar-group) Os04g0670000 (Os04g0670000) mRNA, complete cds Length = 1153 Score = 791 bits (399), Expect = 0.0 Identities = 540/587 (91%) Strand = Plus / Plus Query: 76 cccgccgatctctccacgccctcctcggcggcggcgcagtcgccgacgtgctgctgtggc 135 |||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 254 cccgccgatccctccacgccctcctcggcggcggcgcagtcgccgacttggtgctgtggc 313 Query: 136 ggcggaggaacgcctctgcagcggctgtggggggcgccacggcggtgtggttcctcttcg 195 |||||||||||| || || ||||| |||| ||||||||||||||||||||||||||||| Sbjct: 314 ggcggaggaacgtgtccgcggcggccgtggcgggcgccacggcggtgtggttcctcttcg 373 Query: 196 agcgcgccggctacagcttcccgtcggtcatgtccaacgccctgctcctcctcgtcgcca 255 ||||||| || |||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 374 agcgcgcggggtacagcttcccgtcagtcatggccaacgccctgctcctcctcgtcgcca 433 Query: 256 tcctcttcttctggtccaagtccgcctcgctgctcaacaggcctcttccgccacttccaa 315 |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| || | Sbjct: 434 tcctcttcttctgggccaagtccgcctcgctgctcaacaggcctcttccaccactcccta 493 Query: 316 atctagaggtctcagatgtggtcgttgagaaagctgcagatcaggctgttatatggatca 375 | |||||||||||||||||||| ||||||||||||||||||| |||| || ||||||||| Sbjct: 494 aactagaggtctcagatgtggttgttgagaaagctgcagatcgggctcttgtatggatca 553 Query: 376 acagggtgttggctgttggccatgatattgccatcaagagagataggaaagttttcatac 435 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 554 acaaggtgttggctgttggccatgatattgccatcaagagagataggagtgtttttataa 613 Query: 436 aggttatattggttttgtgggtggtttcgtacattggaatgctcttcaacttccttacac 495 ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 614 aggttatattgattttatgggtggtttcatacattggaatgctcttcaacttccttacgc 673 Query: 496 tcatttatattggcgtaatgttttctctgatggttcctccgttgtatgagaagtaccagg 555 ||||||| ||||| ||||||||||||||| | ||||| || ||||||||||||||||||| Sbjct: 674 tcatttacattggtgtaatgttttctctgttagttccaccattgtatgagaagtaccagg 733 Query: 556 atcatgttgatgaaaaggttggtatagcacacagtgtattgtcaaggcacttagatacca 615 | || || ||||||||| ||||||| || ||||||||| | ||||||||||||||||||| Sbjct: 734 accaagtcgatgaaaagattggtatggcgcacagtgtactatcaaggcacttagatacca 793 Query: 616 tcattagcaagactggacaatcaaccaagcaaaagaagtctgagtaa 662 ||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 794 tcattagcaagactggagaatcaaccaagcaaaagaagactgagtaa 840 Score = 186 bits (94), Expect = 1e-43 Identities = 170/192 (88%), Gaps = 5/192 (2%) Strand = Plus / Plus Query: 734 actctccatacctgtgaaccaccactgaaaatattcttggatatccaagatatcatgttt 793 ||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 906 actctccatacctgtgaaccaccactggaaatattcttggatatcgaagatgtcatgttt 965 Query: 794 gaatgctgatatgtggtttagatgcacgctgttcaatctgagaaatggaatgatttgtat 853 || ||||||| || ||||| |||||| ||||||||| |||||||||||||| ||||||| Sbjct: 966 gactgctgat--gtagtttacatgcactctgttcaatttgagaaatggaatgctttgtat 1023 Query: 854 atttttttcccatgaacatgaaacatgctgaggcataccatgg-cgcatatcttgtggat 912 ||||||| | | ||||||| ||||||||||| || ||||| | |||||||||||||| Sbjct: 1024 atttttt--caagtaacatgacacatgctgaggtttatcatgggcacatatcttgtggat 1081 Query: 913 aatgatatatac 924 |||||||||||| Sbjct: 1082 aatgatatatac 1093 >dbj|AK071792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112F10, full insert sequence Length = 1156 Score = 791 bits (399), Expect = 0.0 Identities = 540/587 (91%) Strand = Plus / Plus Query: 76 cccgccgatctctccacgccctcctcggcggcggcgcagtcgccgacgtgctgctgtggc 135 |||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 256 cccgccgatccctccacgccctcctcggcggcggcgcagtcgccgacttggtgctgtggc 315 Query: 136 ggcggaggaacgcctctgcagcggctgtggggggcgccacggcggtgtggttcctcttcg 195 |||||||||||| || || ||||| |||| ||||||||||||||||||||||||||||| Sbjct: 316 ggcggaggaacgtgtccgcggcggccgtggcgggcgccacggcggtgtggttcctcttcg 375 Query: 196 agcgcgccggctacagcttcccgtcggtcatgtccaacgccctgctcctcctcgtcgcca 255 ||||||| || |||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 376 agcgcgcggggtacagcttcccgtcagtcatggccaacgccctgctcctcctcgtcgcca 435 Query: 256 tcctcttcttctggtccaagtccgcctcgctgctcaacaggcctcttccgccacttccaa 315 |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| || | Sbjct: 436 tcctcttcttctgggccaagtccgcctcgctgctcaacaggcctcttccaccactcccta 495 Query: 316 atctagaggtctcagatgtggtcgttgagaaagctgcagatcaggctgttatatggatca 375 | |||||||||||||||||||| ||||||||||||||||||| |||| || ||||||||| Sbjct: 496 aactagaggtctcagatgtggttgttgagaaagctgcagatcgggctcttgtatggatca 555 Query: 376 acagggtgttggctgttggccatgatattgccatcaagagagataggaaagttttcatac 435 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 556 acaaggtgttggctgttggccatgatattgccatcaagagagataggagtgtttttataa 615 Query: 436 aggttatattggttttgtgggtggtttcgtacattggaatgctcttcaacttccttacac 495 ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 616 aggttatattgattttatgggtggtttcatacattggaatgctcttcaacttccttacgc 675 Query: 496 tcatttatattggcgtaatgttttctctgatggttcctccgttgtatgagaagtaccagg 555 ||||||| ||||| ||||||||||||||| | ||||| || ||||||||||||||||||| Sbjct: 676 tcatttacattggtgtaatgttttctctgttagttccaccattgtatgagaagtaccagg 735 Query: 556 atcatgttgatgaaaaggttggtatagcacacagtgtattgtcaaggcacttagatacca 615 | || || ||||||||| ||||||| || ||||||||| | ||||||||||||||||||| Sbjct: 736 accaagtcgatgaaaagattggtatggcgcacagtgtactatcaaggcacttagatacca 795 Query: 616 tcattagcaagactggacaatcaaccaagcaaaagaagtctgagtaa 662 ||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 796 tcattagcaagactggagaatcaaccaagcaaaagaagactgagtaa 842 Score = 186 bits (94), Expect = 1e-43 Identities = 170/192 (88%), Gaps = 5/192 (2%) Strand = Plus / Plus Query: 734 actctccatacctgtgaaccaccactgaaaatattcttggatatccaagatatcatgttt 793 ||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 908 actctccatacctgtgaaccaccactggaaatattcttggatatcgaagatgtcatgttt 967 Query: 794 gaatgctgatatgtggtttagatgcacgctgttcaatctgagaaatggaatgatttgtat 853 || ||||||| || ||||| |||||| ||||||||| |||||||||||||| ||||||| Sbjct: 968 gactgctgat--gtagtttacatgcactctgttcaatttgagaaatggaatgctttgtat 1025 Query: 854 atttttttcccatgaacatgaaacatgctgaggcataccatgg-cgcatatcttgtggat 912 ||||||| | | ||||||| ||||||||||| || ||||| | |||||||||||||| Sbjct: 1026 atttttt--caagtaacatgacacatgctgaggtttatcatgggcacatatcttgtggat 1083 Query: 913 aatgatatatac 924 |||||||||||| Sbjct: 1084 aatgatatatac 1095 >gb|AY107396.1| Zea mays PCO072559 mRNA sequence Length = 879 Score = 521 bits (263), Expect = e-144 Identities = 506/587 (86%) Strand = Plus / Plus Query: 81 cgatctctccacgccctcctcggcggcggcgcagtcgccgacgtgctgctgtggcggcgg 140 |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 86 cgatctctccacgccctcctcggcggcggcgcagtcgccgacttgctgctgtgtaggcgg 145 Query: 141 aggaacgcctctgcagcggctgtggggggcgccacggcggtgtggttcctcttcgagcgc 200 ||||||||||| || ||||| |||| ||||||||| ||||| |||||| ||||||||||| Sbjct: 146 aggaacgcctcggcggcggccgtggtgggcgccaccgcggtctggttcgtcttcgagcgc 205 Query: 201 gccggctacagcttcccgtcggtcatgtccaacgccctgctcctcctcgtcgccatcctc 260 || |||||||||||||| || ||| ||||||||||||||||||||||||||||||||||| Sbjct: 206 gcgggctacagcttcccttccgtcctgtccaacgccctgctcctcctcgtcgccatcctc 265 Query: 261 ttcttctggtccaagtccgcctcgctgctcaacaggcctcttccgccacttccaaatcta 320 ||||||||| |||||||||| | |||||| |||||||||||||| || ||||| || || Sbjct: 266 ttcttctgggccaagtccgctttgctgcttaacaggcctcttccacctcttcctaacctt 325 Query: 321 gaggtctcagatgtggtcgttgagaaagctgcagatcaggctgttatatggatcaacagg 380 ||||| ||||||| || ||||| || ||||||||| | ||| || |||||||||| ||| Sbjct: 326 gaggtttcagatgcagttgttgaaaaggctgcagattatgctcttgtatggatcaatagg 385 Query: 381 gtgttggctgttggccatgatattgccatcaagagagataggaaagttttcatacaggtt 440 || ||||||| || ||||| || |||||||||||| ||||||||||||| ||| |||| Sbjct: 386 ctgctggctgtcggtcatgacatcgccatcaagagaaataggaaagtttttataaaggtg 445 Query: 441 atattggttttgtgggtggtttcgtacattggaatgctcttcaacttccttacactcatt 500 |||||| |||||||| ||||||| | ||||||||||||||||||| |||||||||||| Sbjct: 446 atattgattttgtggctggtttcatttgttggaatgctcttcaactttcttacactcatt 505 Query: 501 tatattggcgtaatgttttctctgatggttcctccgttgtatgagaagtaccaggatcat 560 || ||||| |||||| |||||||| ||||||| || | ||||||||||| |||||||| Sbjct: 506 tacattggtgtaatgctttctctgttggttccaccactctatgagaagtatcaggatcag 565 Query: 561 gttgatgaaaaggttggtatagcacacagtgtattgtcaaggcacttagataccatcatt 620 ||||||||||||||||| |||| |||||| || | || |||||| || ||||||| || Sbjct: 566 gttgatgaaaaggttggcgtagcgcacagtataatatcgaggcacataaataccattgtt 625 Query: 621 agcaagactggacaatcaaccaagcaaaagaagtctgagtaaaagaa 667 | || | |||| |||||| ||||| | |||||| |||| |||||||| Sbjct: 626 atcagggctgggcaatcagccaaggagaagaagactgaataaaagaa 672 >emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818H01, complete sequence Length = 101125 Score = 268 bits (135), Expect = 4e-68 Identities = 174/187 (93%) Strand = Plus / Plus Query: 110 cgcagtcgccgacgtgctgctgtggcggcggaggaacgcctctgcagcggctgtgggggg 169 ||||||||||||| || ||||||||||||||||||||| || || ||||| |||| ||| Sbjct: 51352 cgcagtcgccgacttggtgctgtggcggcggaggaacgtgtccgcggcggccgtggcggg 51411 Query: 170 cgccacggcggtgtggttcctcttcgagcgcgccggctacagcttcccgtcggtcatgtc 229 ||||||||||||||||||||||||||||||||| || |||||||||||||| |||||| | Sbjct: 51412 cgccacggcggtgtggttcctcttcgagcgcgcggggtacagcttcccgtcagtcatggc 51471 Query: 230 caacgccctgctcctcctcgtcgccatcctcttcttctggtccaagtccgcctcgctgct 289 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 51472 caacgccctgctcctcctcgtcgccatcctcttcttctgggccaagtccgcctcgctgct 51531 Query: 290 caacagg 296 ||||||| Sbjct: 51532 caacagg 51538 Score = 192 bits (97), Expect = 2e-45 Identities = 139/153 (90%) Strand = Plus / Plus Query: 510 gtaatgttttctctgatggttcctccgttgtatgagaagtaccaggatcatgttgatgaa 569 ||||||||||||||| | ||||| || |||||||||||||||||||| || || |||||| Sbjct: 52830 gtaatgttttctctgttagttccaccattgtatgagaagtaccaggaccaagtcgatgaa 52889 Query: 570 aaggttggtatagcacacagtgtattgtcaaggcacttagataccatcattagcaagact 629 ||| ||||||| || ||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 52890 aagattggtatggcgcacagtgtactatcaaggcacttagataccatcattagcaagact 52949 Query: 630 ggacaatcaaccaagcaaaagaagtctgagtaa 662 ||| |||||||||||||||||||| |||||||| Sbjct: 52950 ggagaatcaaccaagcaaaagaagactgagtaa 52982 Score = 188 bits (95), Expect = 3e-44 Identities = 122/131 (93%) Strand = Plus / Plus Query: 293 caggcctcttccgccacttccaaatctagaggtctcagatgtggtcgttgagaaagctgc 352 |||||||||||| ||||| || || |||||||||||||||||||| |||||||||||||| Sbjct: 52378 caggcctcttccaccactccctaaactagaggtctcagatgtggttgttgagaaagctgc 52437 Query: 353 agatcaggctgttatatggatcaacagggtgttggctgttggccatgatattgccatcaa 412 ||||| |||| || |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 52438 agatcgggctcttgtatggatcaacaaggtgttggctgttggccatgatattgccatcaa 52497 Query: 413 gagagatagga 423 ||||||||||| Sbjct: 52498 gagagatagga 52508 Score = 186 bits (94), Expect = 1e-43 Identities = 170/192 (88%), Gaps = 5/192 (2%) Strand = Plus / Plus Query: 734 actctccatacctgtgaaccaccactgaaaatattcttggatatccaagatatcatgttt 793 ||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 53645 actctccatacctgtgaaccaccactggaaatattcttggatatcgaagatgtcatgttt 53704 Query: 794 gaatgctgatatgtggtttagatgcacgctgttcaatctgagaaatggaatgatttgtat 853 || ||||||| || ||||| |||||| ||||||||| |||||||||||||| ||||||| Sbjct: 53705 gactgctgat--gtagtttacatgcactctgttcaatttgagaaatggaatgctttgtat 53762 Query: 854 atttttttcccatgaacatgaaacatgctgaggcataccatgg-cgcatatcttgtggat 912 ||||||| | | ||||||| ||||||||||| || ||||| | |||||||||||||| Sbjct: 53763 atttttt--caagtaacatgacacatgctgaggtttatcatgggcacatatcttgtggat 53820 Query: 913 aatgatatatac 924 |||||||||||| Sbjct: 53821 aatgatatatac 53832 Score = 109 bits (55), Expect = 2e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 430 tcatacaggttatattggttttgtgggtggtttcgtacattggaatgctcttcaacttcc 489 ||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 52635 tcatataggttatattgattttatgggtggtttcatacattggaatgctcttcaacttcc 52694 Query: 490 ttacactcatttatattgg 508 |||| |||||||| ||||| Sbjct: 52695 ttacgctcatttacattgg 52713 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 268 bits (135), Expect = 4e-68 Identities = 174/187 (93%) Strand = Plus / Plus Query: 110 cgcagtcgccgacgtgctgctgtggcggcggaggaacgcctctgcagcggctgtgggggg 169 ||||||||||||| || ||||||||||||||||||||| || || ||||| |||| ||| Sbjct: 34200672 cgcagtcgccgacttggtgctgtggcggcggaggaacgtgtccgcggcggccgtggcggg 34200731 Query: 170 cgccacggcggtgtggttcctcttcgagcgcgccggctacagcttcccgtcggtcatgtc 229 ||||||||||||||||||||||||||||||||| || |||||||||||||| |||||| | Sbjct: 34200732 cgccacggcggtgtggttcctcttcgagcgcgcggggtacagcttcccgtcagtcatggc 34200791 Query: 230 caacgccctgctcctcctcgtcgccatcctcttcttctggtccaagtccgcctcgctgct 289 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 34200792 caacgccctgctcctcctcgtcgccatcctcttcttctgggccaagtccgcctcgctgct 34200851 Query: 290 caacagg 296 ||||||| Sbjct: 34200852 caacagg 34200858 Score = 192 bits (97), Expect = 2e-45 Identities = 139/153 (90%) Strand = Plus / Plus Query: 510 gtaatgttttctctgatggttcctccgttgtatgagaagtaccaggatcatgttgatgaa 569 ||||||||||||||| | ||||| || |||||||||||||||||||| || || |||||| Sbjct: 34202150 gtaatgttttctctgttagttccaccattgtatgagaagtaccaggaccaagtcgatgaa 34202209 Query: 570 aaggttggtatagcacacagtgtattgtcaaggcacttagataccatcattagcaagact 629 ||| ||||||| || ||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 34202210 aagattggtatggcgcacagtgtactatcaaggcacttagataccatcattagcaagact 34202269 Query: 630 ggacaatcaaccaagcaaaagaagtctgagtaa 662 ||| |||||||||||||||||||| |||||||| Sbjct: 34202270 ggagaatcaaccaagcaaaagaagactgagtaa 34202302 Score = 188 bits (95), Expect = 3e-44 Identities = 122/131 (93%) Strand = Plus / Plus Query: 293 caggcctcttccgccacttccaaatctagaggtctcagatgtggtcgttgagaaagctgc 352 |||||||||||| ||||| || || |||||||||||||||||||| |||||||||||||| Sbjct: 34201698 caggcctcttccaccactccctaaactagaggtctcagatgtggttgttgagaaagctgc 34201757 Query: 353 agatcaggctgttatatggatcaacagggtgttggctgttggccatgatattgccatcaa 412 ||||| |||| || |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 34201758 agatcgggctcttgtatggatcaacaaggtgttggctgttggccatgatattgccatcaa 34201817 Query: 413 gagagatagga 423 ||||||||||| Sbjct: 34201818 gagagatagga 34201828 Score = 186 bits (94), Expect = 1e-43 Identities = 170/192 (88%), Gaps = 5/192 (2%) Strand = Plus / Plus Query: 734 actctccatacctgtgaaccaccactgaaaatattcttggatatccaagatatcatgttt 793 ||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 34202965 actctccatacctgtgaaccaccactggaaatattcttggatatcgaagatgtcatgttt 34203024 Query: 794 gaatgctgatatgtggtttagatgcacgctgttcaatctgagaaatggaatgatttgtat 853 || ||||||| || ||||| |||||| ||||||||| |||||||||||||| ||||||| Sbjct: 34203025 gactgctgat--gtagtttacatgcactctgttcaatttgagaaatggaatgctttgtat 34203082 Query: 854 atttttttcccatgaacatgaaacatgctgaggcataccatgg-cgcatatcttgtggat 912 ||||||| | | ||||||| ||||||||||| || ||||| | |||||||||||||| Sbjct: 34203083 atttttt--caagtaacatgacacatgctgaggtttatcatgggcacatatcttgtggat 34203140 Query: 913 aatgatatatac 924 |||||||||||| Sbjct: 34203141 aatgatatatac 34203152 Score = 109 bits (55), Expect = 2e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 430 tcatacaggttatattggttttgtgggtggtttcgtacattggaatgctcttcaacttcc 489 ||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 34201955 tcatataggttatattgattttatgggtggtttcatacattggaatgctcttcaacttcc 34202014 Query: 490 ttacactcatttatattgg 508 |||| |||||||| ||||| Sbjct: 34202015 ttacgctcatttacattgg 34202033