BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf028k24 (1016 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT835114.1| Oryza sativa (indica cultivar-group) cDNA clone:... 422 e-114 gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 geno... 422 e-114 gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno... 422 e-114 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 422 e-114 ref|NM_001057980.1| Oryza sativa (japonica cultivar-group) Os03g... 404 e-109 >emb|CT835114.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA050H06, full insert sequence Length = 1008 Score = 422 bits (213), Expect = e-114 Identities = 325/363 (89%), Gaps = 12/363 (3%) Strand = Plus / Plus Query: 406 ccgccgcgtgccggcgctcctggatcccctgcctcgtgtcgctgctgtcgtcgctggcca 465 |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 324 ccgcggcgtgccggcgctcgtggatcccctgcctcgtgtcgctgctctcgtcgctggcca 383 Query: 466 tgctctgggcgctgcggtacaaggcggacacggaggccatcctggagcggctgctggcgc 525 |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 384 tgctgtgggcgctgcggtacaaggcggacacggaggcggtgctggagcggctgctggcgc 443 Query: 526 gggagcgggaggacgcagtgctgctcggcaagtgcgttgccgagctcaagcgcaaggggc 585 |||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 444 gggagcgggaggacgcgctgctgctcggcaagtgcgtcgccgagctcaagcggaaggggc 503 Query: 586 tcgagttcgacctgctcaaggaagtggacgcgctgcgacgggccaagagcctccgcgtcg 645 ||||||||||||| |||||||| |||||||||||||| || ||||||||||| ||||||| Sbjct: 504 tcgagttcgacctcctcaaggaggtggacgcgctgcgccgcgccaagagcctgcgcgtcg 563 Query: 646 aggccaagggcg---------gcgagaggcctgccaggcggtggccggccagggacctcg 696 |||||||||||| |||||||||| || ||| ||| ||||||||||||||| Sbjct: 564 aggccaagggcggcgccggcggcgagaggcc---caagcgctgggcggccagggacctcg 620 Query: 697 ccgtcttcgcgctcttcagcgccgcctgcggtgtcctcgtgctcacgaggttcttgctct 756 |||||||| |||||| ||||||||||||| |||||||||||||| |||| |||||||| Sbjct: 621 ccgtcttcctcctcttcggcgccgcctgcggcgtcctcgtgctcaccaggtacttgctct 680 Query: 757 gca 759 ||| Sbjct: 681 gca 683 Score = 303 bits (153), Expect = 7e-79 Identities = 198/213 (92%) Strand = Plus / Plus Query: 158 ggggcagccgcagccgcggcacccgctgagccagatcgccgcgagcgggacgcaccggct 217 ||||||| || || || |||||||||||||||||||||| | |||||||||||||||||| Sbjct: 94 ggggcaggcgaaggcgaggcacccgctgagccagatcgcggagagcgggacgcaccggct 153 Query: 218 gctgcttaagcagtggctcaaggaggaggacctcctcgcccgccgcatcgcgctgcggga 277 |||||| |||||||||||||||||||||||||| |||||||||||| |||| |||||||| Sbjct: 154 gctgctgaagcagtggctcaaggaggaggacctgctcgcccgccgcgtcgccctgcggga 213 Query: 278 agcgcgcctcgacggcgcccgcaaggagatcgccttcctctactgcgccttcttcgcctt 337 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 ggcccgcctcgacggcgcccgcaaggagatcgccttcctctactgcgccttcttcgcctt 273 Query: 338 ccacgccgcgtccgtcctcatcctcttcctctc 370 ||||||||| ||| ||||| ||||||||||||| Sbjct: 274 ccacgccgcctccatcctcctcctcttcctctc 306 >gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete sequence Length = 144306 Score = 422 bits (213), Expect = e-114 Identities = 325/363 (89%), Gaps = 12/363 (3%) Strand = Plus / Plus Query: 406 ccgccgcgtgccggcgctcctggatcccctgcctcgtgtcgctgctgtcgtcgctggcca 465 |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 95397 ccgcggcgtgccggcgctcgtggatcccctgcctcgtgtcgctgctctcgtcgctggcca 95456 Query: 466 tgctctgggcgctgcggtacaaggcggacacggaggccatcctggagcggctgctggcgc 525 |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 95457 tgctgtgggcgctgcggtacaaggcggacacggaggcggtgctggagcggctgctggcgc 95516 Query: 526 gggagcgggaggacgcagtgctgctcggcaagtgcgttgccgagctcaagcgcaaggggc 585 |||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 95517 gggagcgggaggacgcgctgctgctcggcaagtgcgtcgccgagctcaagcggaaggggc 95576 Query: 586 tcgagttcgacctgctcaaggaagtggacgcgctgcgacgggccaagagcctccgcgtcg 645 ||||||||||||| |||||||| |||||||||||||| || ||||||||||| ||||||| Sbjct: 95577 tcgagttcgacctcctcaaggaggtggacgcgctgcgccgcgccaagagcctgcgcgtcg 95636 Query: 646 aggccaagggcg---------gcgagaggcctgccaggcggtggccggccagggacctcg 696 |||||||||||| |||||||||| || ||| ||| ||||||||||||||| Sbjct: 95637 aggccaagggcggcgccggcggcgagaggcc---caagcgctgggcggccagggacctcg 95693 Query: 697 ccgtcttcgcgctcttcagcgccgcctgcggtgtcctcgtgctcacgaggttcttgctct 756 |||||||| |||||| ||||||||||||| |||||||||||||| |||| |||||||| Sbjct: 95694 ccgtcttcctcctcttcggcgccgcctgcggcgtcctcgtgctcaccaggtacttgctct 95753 Query: 757 gca 759 ||| Sbjct: 95754 gca 95756 Score = 303 bits (153), Expect = 7e-79 Identities = 198/213 (92%) Strand = Plus / Plus Query: 158 ggggcagccgcagccgcggcacccgctgagccagatcgccgcgagcgggacgcaccggct 217 ||||||| || || || |||||||||||||||||||||| | |||||||||||||||||| Sbjct: 95167 ggggcaggcgaaggcgaggcacccgctgagccagatcgcggagagcgggacgcaccggct 95226 Query: 218 gctgcttaagcagtggctcaaggaggaggacctcctcgcccgccgcatcgcgctgcggga 277 |||||| |||||||||||||||||||||||||| |||||||||||| |||| |||||||| Sbjct: 95227 gctgctgaagcagtggctcaaggaggaggacctgctcgcccgccgcgtcgccctgcggga 95286 Query: 278 agcgcgcctcgacggcgcccgcaaggagatcgccttcctctactgcgccttcttcgcctt 337 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95287 ggcccgcctcgacggcgcccgcaaggagatcgccttcctctactgcgccttcttcgcctt 95346 Query: 338 ccacgccgcgtccgtcctcatcctcttcctctc 370 ||||||||| ||| ||||| ||||||||||||| Sbjct: 95347 ccacgccgcctccatcctcctcctcttcctctc 95379 >gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 422 bits (213), Expect = e-114 Identities = 325/363 (89%), Gaps = 12/363 (3%) Strand = Plus / Plus Query: 406 ccgccgcgtgccggcgctcctggatcccctgcctcgtgtcgctgctgtcgtcgctggcca 465 |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 4570 ccgcggcgtgccggcgctcgtggatcccctgcctcgtgtcgctgctctcgtcgctggcca 4629 Query: 466 tgctctgggcgctgcggtacaaggcggacacggaggccatcctggagcggctgctggcgc 525 |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 4630 tgctgtgggcgctgcggtacaaggcggacacggaggcggtgctggagcggctgctggcgc 4689 Query: 526 gggagcgggaggacgcagtgctgctcggcaagtgcgttgccgagctcaagcgcaaggggc 585 |||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 4690 gggagcgggaggacgcgctgctgctcggcaagtgcgtcgccgagctcaagcggaaggggc 4749 Query: 586 tcgagttcgacctgctcaaggaagtggacgcgctgcgacgggccaagagcctccgcgtcg 645 ||||||||||||| |||||||| |||||||||||||| || ||||||||||| ||||||| Sbjct: 4750 tcgagttcgacctcctcaaggaggtggacgcgctgcgccgcgccaagagcctgcgcgtcg 4809 Query: 646 aggccaagggcg---------gcgagaggcctgccaggcggtggccggccagggacctcg 696 |||||||||||| |||||||||| || ||| ||| ||||||||||||||| Sbjct: 4810 aggccaagggcggcgccggcggcgagaggcc---caagcgctgggcggccagggacctcg 4866 Query: 697 ccgtcttcgcgctcttcagcgccgcctgcggtgtcctcgtgctcacgaggttcttgctct 756 |||||||| |||||| ||||||||||||| |||||||||||||| |||| |||||||| Sbjct: 4867 ccgtcttcctcctcttcggcgccgcctgcggcgtcctcgtgctcaccaggtacttgctct 4926 Query: 757 gca 759 ||| Sbjct: 4927 gca 4929 Score = 303 bits (153), Expect = 7e-79 Identities = 198/213 (92%) Strand = Plus / Plus Query: 158 ggggcagccgcagccgcggcacccgctgagccagatcgccgcgagcgggacgcaccggct 217 ||||||| || || || |||||||||||||||||||||| | |||||||||||||||||| Sbjct: 4340 ggggcaggcgaaggcgaggcacccgctgagccagatcgcggagagcgggacgcaccggct 4399 Query: 218 gctgcttaagcagtggctcaaggaggaggacctcctcgcccgccgcatcgcgctgcggga 277 |||||| |||||||||||||||||||||||||| |||||||||||| |||| |||||||| Sbjct: 4400 gctgctgaagcagtggctcaaggaggaggacctgctcgcccgccgcgtcgccctgcggga 4459 Query: 278 agcgcgcctcgacggcgcccgcaaggagatcgccttcctctactgcgccttcttcgcctt 337 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4460 ggcccgcctcgacggcgcccgcaaggagatcgccttcctctactgcgccttcttcgcctt 4519 Query: 338 ccacgccgcgtccgtcctcatcctcttcctctc 370 ||||||||| ||| ||||| ||||||||||||| Sbjct: 4520 ccacgccgcctccatcctcctcctcttcctctc 4552 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 422 bits (213), Expect = e-114 Identities = 325/363 (89%), Gaps = 12/363 (3%) Strand = Plus / Plus Query: 406 ccgccgcgtgccggcgctcctggatcccctgcctcgtgtcgctgctgtcgtcgctggcca 465 |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 32093957 ccgcggcgtgccggcgctcgtggatcccctgcctcgtgtcgctgctctcgtcgctggcca 32094016 Query: 466 tgctctgggcgctgcggtacaaggcggacacggaggccatcctggagcggctgctggcgc 525 |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 32094017 tgctgtgggcgctgcggtacaaggcggacacggaggcggtgctggagcggctgctggcgc 32094076 Query: 526 gggagcgggaggacgcagtgctgctcggcaagtgcgttgccgagctcaagcgcaaggggc 585 |||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 32094077 gggagcgggaggacgcgctgctgctcggcaagtgcgtcgccgagctcaagcggaaggggc 32094136 Query: 586 tcgagttcgacctgctcaaggaagtggacgcgctgcgacgggccaagagcctccgcgtcg 645 ||||||||||||| |||||||| |||||||||||||| || ||||||||||| ||||||| Sbjct: 32094137 tcgagttcgacctcctcaaggaggtggacgcgctgcgccgcgccaagagcctgcgcgtcg 32094196 Query: 646 aggccaagggcg---------gcgagaggcctgccaggcggtggccggccagggacctcg 696 |||||||||||| |||||||||| || ||| ||| ||||||||||||||| Sbjct: 32094197 aggccaagggcggcgccggcggcgagaggcc---caagcgctgggcggccagggacctcg 32094253 Query: 697 ccgtcttcgcgctcttcagcgccgcctgcggtgtcctcgtgctcacgaggttcttgctct 756 |||||||| |||||| ||||||||||||| |||||||||||||| |||| |||||||| Sbjct: 32094254 ccgtcttcctcctcttcggcgccgcctgcggcgtcctcgtgctcaccaggtacttgctct 32094313 Query: 757 gca 759 ||| Sbjct: 32094314 gca 32094316 Score = 303 bits (153), Expect = 7e-79 Identities = 198/213 (92%) Strand = Plus / Plus Query: 158 ggggcagccgcagccgcggcacccgctgagccagatcgccgcgagcgggacgcaccggct 217 ||||||| || || || |||||||||||||||||||||| | |||||||||||||||||| Sbjct: 32093727 ggggcaggcgaaggcgaggcacccgctgagccagatcgcggagagcgggacgcaccggct 32093786 Query: 218 gctgcttaagcagtggctcaaggaggaggacctcctcgcccgccgcatcgcgctgcggga 277 |||||| |||||||||||||||||||||||||| |||||||||||| |||| |||||||| Sbjct: 32093787 gctgctgaagcagtggctcaaggaggaggacctgctcgcccgccgcgtcgccctgcggga 32093846 Query: 278 agcgcgcctcgacggcgcccgcaaggagatcgccttcctctactgcgccttcttcgcctt 337 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32093847 ggcccgcctcgacggcgcccgcaaggagatcgccttcctctactgcgccttcttcgcctt 32093906 Query: 338 ccacgccgcgtccgtcctcatcctcttcctctc 370 ||||||||| ||| ||||| ||||||||||||| Sbjct: 32093907 ccacgccgcctccatcctcctcctcttcctctc 32093939 >ref|NM_001057980.1| Oryza sativa (japonica cultivar-group) Os03g0778400 (Os03g0778400) mRNA, complete cds Length = 609 Score = 404 bits (204), Expect = e-109 Identities = 310/346 (89%), Gaps = 12/346 (3%) Strand = Plus / Plus Query: 406 ccgccgcgtgccggcgctcctggatcccctgcctcgtgtcgctgctgtcgtcgctggcca 465 |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 257 ccgcggcgtgccggcgctcgtggatcccctgcctcgtgtcgctgctctcgtcgctggcca 316 Query: 466 tgctctgggcgctgcggtacaaggcggacacggaggccatcctggagcggctgctggcgc 525 |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 317 tgctgtgggcgctgcggtacaaggcggacacggaggcggtgctggagcggctgctggcgc 376 Query: 526 gggagcgggaggacgcagtgctgctcggcaagtgcgttgccgagctcaagcgcaaggggc 585 |||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 377 gggagcgggaggacgcgctgctgctcggcaagtgcgtcgccgagctcaagcggaaggggc 436 Query: 586 tcgagttcgacctgctcaaggaagtggacgcgctgcgacgggccaagagcctccgcgtcg 645 ||||||||||||| |||||||| |||||||||||||| || ||||||||||| ||||||| Sbjct: 437 tcgagttcgacctcctcaaggaggtggacgcgctgcgccgcgccaagagcctgcgcgtcg 496 Query: 646 aggccaagggcg---------gcgagaggcctgccaggcggtggccggccagggacctcg 696 |||||||||||| |||||||||| || ||| ||| ||||||||||||||| Sbjct: 497 aggccaagggcggcgccggcggcgagaggcc---caagcgctgggcggccagggacctcg 553 Query: 697 ccgtcttcgcgctcttcagcgccgcctgcggtgtcctcgtgctcac 742 |||||||| |||||| ||||||||||||| |||||||||||||| Sbjct: 554 ccgtcttcctcctcttcggcgccgcctgcggcgtcctcgtgctcac 599 Score = 303 bits (153), Expect = 7e-79 Identities = 198/213 (92%) Strand = Plus / Plus Query: 158 ggggcagccgcagccgcggcacccgctgagccagatcgccgcgagcgggacgcaccggct 217 ||||||| || || || |||||||||||||||||||||| | |||||||||||||||||| Sbjct: 27 ggggcaggcgaaggcgaggcacccgctgagccagatcgcggagagcgggacgcaccggct 86 Query: 218 gctgcttaagcagtggctcaaggaggaggacctcctcgcccgccgcatcgcgctgcggga 277 |||||| |||||||||||||||||||||||||| |||||||||||| |||| |||||||| Sbjct: 87 gctgctgaagcagtggctcaaggaggaggacctgctcgcccgccgcgtcgccctgcggga 146 Query: 278 agcgcgcctcgacggcgcccgcaaggagatcgccttcctctactgcgccttcttcgcctt 337 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 ggcccgcctcgacggcgcccgcaaggagatcgccttcctctactgcgccttcttcgcctt 206 Query: 338 ccacgccgcgtccgtcctcatcctcttcctctc 370 ||||||||| ||| ||||| ||||||||||||| Sbjct: 207 ccacgccgcctccatcctcctcctcttcctctc 239