BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf028j06 (1316 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001071952.1| Oryza sativa (japonica cultivar-group) Os10g... 321 4e-84 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 280 1e-71 gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 gen... 280 1e-71 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 103 2e-18 dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic D... 103 2e-18 >ref|NM_001071952.1| Oryza sativa (japonica cultivar-group) Os10g0565500 (Os10g0565500) mRNA, complete cds Length = 1089 Score = 321 bits (162), Expect = 4e-84 Identities = 421/506 (83%), Gaps = 21/506 (4%) Strand = Plus / Plus Query: 400 cgccgcagctcttctcgctgcagccgcaggctt---cgcaggggcacaaggtgataagcc 456 |||||||| | || ||||||||||||||||| ||||||||||||||||| | |||| Sbjct: 284 cgccgcagatgttgtcgctgcagccgcaggcgcaggcgcaggggcacaaggtggtgagcc 343 Query: 457 tggcgcagctccacaa------gcggccggcg---acgggcctccggctcaacttcgacg 507 |||||||||| ||||| || ||||||| ||||| ||||| ||| ||||||||| Sbjct: 344 tggcgcagctgcacaacaagcggccgccggcgtcgacggggctccgcctcgacttcgacg 403 Query: 508 agggc---tcggagcacgtgtcgtccacg------tcctcggcgtcgtctctcctctccg 558 | ||| ||||||||||||||| | ||| ||||| ||||||||||||||||||| Sbjct: 404 acggcgggtcggagcacgtgtcgacgacgaccacctcctccgcgtcgtctctcctctccg 463 Query: 559 acgagctcgccgcgcagtgcgaccagtacaaaaatgacgtggaccggctgctccaagaac 618 ||||||||||| |||||| ||||| || ||| || || ||| || || |||| || | Sbjct: 464 acgagctcgccacgcagttcgaccggtgcaagaacgagatggcgcgtatgttccaggatc 523 Query: 619 atgcggatgggctccggcgagcgttggctgaggtgaggcggcggcactatcgctcgctgc 678 || |||| |||| || || ||| ||| |||||||||||||||||||| || ||||||| Sbjct: 524 atacggagaggctgcgccgcgcgctgggcgaggtgaggcggcggcactaccggtcgctgc 583 Query: 679 tgggcgcggcagaggcggcggcagcacggcgggtaagggagaaggaggcggaggtctcaa 738 | |||||||| ||||||||||| || || ||| | ||||||||||||||||||| ||| | Sbjct: 584 tcggcgcggcggaggcggcggcggcgcgccggatgagggagaaggaggcggaggcctcga 643 Query: 739 aggcggcacggcgcggcgccgagctagaggagcagctggcgcggctgagggcggaggcgg 798 | ||||| ||||||||||||||||| ||||||| | ||||||||| |||||||||||| Sbjct: 644 atgcggcgcggcgcggcgccgagctggaggagcgcgtcgcgcggctgcgggcggaggcgg 703 Query: 799 tggcgtggcaggcgaaggcgctggccgaccagtccacggccgcggcgctccacgcgcagc 858 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 704 cggcgtggcaggcgaaggcgctcgccgaccagtccaccgccgcggcgctccacgcgcagc 763 Query: 859 tgcagcaggcggcggcggctgcggcg 884 | ||||||||||||||||| |||||| Sbjct: 764 tccagcaggcggcggcggccgcggcg 789 Score = 198 bits (100), Expect = 4e-47 Identities = 203/236 (86%), Gaps = 6/236 (2%) Strand = Plus / Plus Query: 921 gcggacgacgccgagtcgggcttcgtcgacccggacagggtggaggtggtcgcaccgccg 980 |||||||||||||||||||| ||||||||||||||||| ||||||| ||| | |||||| Sbjct: 850 gcggacgacgccgagtcggggttcgtcgacccggacagagtggaggaggtgaccccgccg 909 Query: 981 ccg--gcca----ggccgtgccggacgtgccggcgccgggcgtcgtccatcgtgctgctc 1034 ||| ||| |||||||||||||||||||| || |||| ||| |||| || ||| Sbjct: 910 ccgccgccgtcgcggccgtgccggacgtgccgggcgaggccgtcctccgtcgtcctcctc 969 Query: 1035 ccgtgccgccacctctgcgtgtgcgacgcgtgcgagcccgccgtctccaccaccgccacc 1094 || ||||||||||||||||||||||| |||||||||||||||||||||||| || | || Sbjct: 970 ccctgccgccacctctgcgtgtgcgaggcgtgcgagcccgccgtctccaccgccatcgcc 1029 Query: 1095 gcagcctgccccatgtgccgctgcgcggtcaccggcaccgtgcaagtcttcttctc 1150 || |||||||||| ||||||| |||||||||||||||||||||| |||||| |||| Sbjct: 1030 gccgcctgccccacgtgccgcggcgcggtcaccggcaccgtgcaggtcttcatctc 1085 Score = 87.7 bits (44), Expect = 1e-13 Identities = 71/80 (88%) Strand = Plus / Plus Query: 315 cctcccctgttcttggacttctcccatggagatggagatggcggcagcggaaggaagcgg 374 |||||||| |||||||||||||| ||||||||||||||||| |||| | ||||||||| Sbjct: 181 cctcccctcttcttggacttctcgcatggagatggagatgggggcaactcgaggaagcgg 240 Query: 375 ccgcgcgaggcggaggcggc 394 ||||| |||||||| ||||| Sbjct: 241 ccgcgagaggcggatgcggc 260 >dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 280 bits (141), Expect = 1e-71 Identities = 213/237 (89%) Strand = Plus / Minus Query: 648 gaggtgaggcggcggcactatcgctcgctgctgggcgcggcagaggcggcggcagcacgg 707 |||||||||||||||||||| || |||||||| |||||||| ||||||||||| || || Sbjct: 21854422 gaggtgaggcggcggcactaccggtcgctgctcggcgcggcggaggcggcggcggcgcgc 21854363 Query: 708 cgggtaagggagaaggaggcggaggtctcaaaggcggcacggcgcggcgccgagctagag 767 ||| | ||||||||||||||||||| ||| || ||||| ||||||||||||||||| ||| Sbjct: 21854362 cggatgagggagaaggaggcggaggcctcgaatgcggcgcggcgcggcgccgagctggag 21854303 Query: 768 gagcagctggcgcggctgagggcggaggcggtggcgtggcaggcgaaggcgctggccgac 827 |||| | ||||||||| |||||||||||| ||||||||||||||||||||| |||||| Sbjct: 21854302 gagcgcgtcgcgcggctgcgggcggaggcggcggcgtggcaggcgaaggcgctcgccgac 21854243 Query: 828 cagtccacggccgcggcgctccacgcgcagctgcagcaggcggcggcggctgcggcg 884 |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 21854242 cagtccaccgccgcggcgctccacgcgcagctccagcaggcggcggcggccgcggcg 21854186 Score = 198 bits (100), Expect = 4e-47 Identities = 203/236 (86%), Gaps = 6/236 (2%) Strand = Plus / Minus Query: 921 gcggacgacgccgagtcgggcttcgtcgacccggacagggtggaggtggtcgcaccgccg 980 |||||||||||||||||||| ||||||||||||||||| ||||||| ||| | |||||| Sbjct: 21854125 gcggacgacgccgagtcggggttcgtcgacccggacagagtggaggaggtgaccccgccg 21854066 Query: 981 ccg--gcca----ggccgtgccggacgtgccggcgccgggcgtcgtccatcgtgctgctc 1034 ||| ||| |||||||||||||||||||| || |||| ||| |||| || ||| Sbjct: 21854065 ccgccgccgtcgcggccgtgccggacgtgccgggcgaggccgtcctccgtcgtcctcctc 21854006 Query: 1035 ccgtgccgccacctctgcgtgtgcgacgcgtgcgagcccgccgtctccaccaccgccacc 1094 || ||||||||||||||||||||||| |||||||||||||||||||||||| || | || Sbjct: 21854005 ccctgccgccacctctgcgtgtgcgaggcgtgcgagcccgccgtctccaccgccatcgcc 21853946 Query: 1095 gcagcctgccccatgtgccgctgcgcggtcaccggcaccgtgcaagtcttcttctc 1150 || |||||||||| ||||||| |||||||||||||||||||||| |||||| |||| Sbjct: 21853945 gccgcctgccccacgtgccgcggcgcggtcaccggcaccgtgcaggtcttcatctc 21853890 >gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 280 bits (141), Expect = 1e-71 Identities = 213/237 (89%) Strand = Plus / Plus Query: 648 gaggtgaggcggcggcactatcgctcgctgctgggcgcggcagaggcggcggcagcacgg 707 |||||||||||||||||||| || |||||||| |||||||| ||||||||||| || || Sbjct: 153899 gaggtgaggcggcggcactaccggtcgctgctcggcgcggcggaggcggcggcggcgcgc 153958 Query: 708 cgggtaagggagaaggaggcggaggtctcaaaggcggcacggcgcggcgccgagctagag 767 ||| | ||||||||||||||||||| ||| || ||||| ||||||||||||||||| ||| Sbjct: 153959 cggatgagggagaaggaggcggaggcctcgaatgcggcgcggcgcggcgccgagctggag 154018 Query: 768 gagcagctggcgcggctgagggcggaggcggtggcgtggcaggcgaaggcgctggccgac 827 |||| | ||||||||| |||||||||||| ||||||||||||||||||||| |||||| Sbjct: 154019 gagcgcgtcgcgcggctgcgggcggaggcggcggcgtggcaggcgaaggcgctcgccgac 154078 Query: 828 cagtccacggccgcggcgctccacgcgcagctgcagcaggcggcggcggctgcggcg 884 |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 154079 cagtccaccgccgcggcgctccacgcgcagctccagcaggcggcggcggccgcggcg 154135 Score = 198 bits (100), Expect = 4e-47 Identities = 203/236 (86%), Gaps = 6/236 (2%) Strand = Plus / Plus Query: 921 gcggacgacgccgagtcgggcttcgtcgacccggacagggtggaggtggtcgcaccgccg 980 |||||||||||||||||||| ||||||||||||||||| ||||||| ||| | |||||| Sbjct: 154196 gcggacgacgccgagtcggggttcgtcgacccggacagagtggaggaggtgaccccgccg 154255 Query: 981 ccg--gcca----ggccgtgccggacgtgccggcgccgggcgtcgtccatcgtgctgctc 1034 ||| ||| |||||||||||||||||||| || |||| ||| |||| || ||| Sbjct: 154256 ccgccgccgtcgcggccgtgccggacgtgccgggcgaggccgtcctccgtcgtcctcctc 154315 Query: 1035 ccgtgccgccacctctgcgtgtgcgacgcgtgcgagcccgccgtctccaccaccgccacc 1094 || ||||||||||||||||||||||| |||||||||||||||||||||||| || | || Sbjct: 154316 ccctgccgccacctctgcgtgtgcgaggcgtgcgagcccgccgtctccaccgccatcgcc 154375 Query: 1095 gcagcctgccccatgtgccgctgcgcggtcaccggcaccgtgcaagtcttcttctc 1150 || |||||||||| ||||||| |||||||||||||||||||||| |||||| |||| Sbjct: 154376 gccgcctgccccacgtgccgcggcgcggtcaccggcaccgtgcaggtcttcatctc 154431 >dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 103 bits (52), Expect = 2e-18 Identities = 79/88 (89%) Strand = Plus / Minus Query: 786 agggcggaggcggtggcgtggcaggcgaaggcgctggccgaccagtccacggccgcggcg 845 ||||||||||||||||||||||||||||||||||| |||||||||||||| | | |||| Sbjct: 1906941 agggcggaggcggtggcgtggcaggcgaaggcgcttgccgaccagtccaccgtggtggcg 1906882 Query: 846 ctccacgcgcagctgcagcaggcggcgg 873 |||||||| |||| ||||| ||||||| Sbjct: 1906881 ctccacgcatagctccagcatgcggcgg 1906854 >dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 103 bits (52), Expect = 2e-18 Identities = 79/88 (89%) Strand = Plus / Minus Query: 786 agggcggaggcggtggcgtggcaggcgaaggcgctggccgaccagtccacggccgcggcg 845 ||||||||||||||||||||||||||||||||||| |||||||||||||| | | |||| Sbjct: 32139 agggcggaggcggtggcgtggcaggcgaaggcgcttgccgaccagtccaccgtggtggcg 32080 Query: 846 ctccacgcgcagctgcagcaggcggcgg 873 |||||||| |||| ||||| ||||||| Sbjct: 32079 ctccacgcatagctccagcatgcggcgg 32052