BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf027p07 (1024 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001054805.1| Oryza sativa (japonica cultivar-group) Os02g... 264 6e-67 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 264 6e-67 dbj|AP004853.3| Oryza sativa (japonica cultivar-group) genomic D... 264 6e-67 dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic D... 264 6e-67 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 170 7e-39 >ref|NM_001054805.1| Oryza sativa (japonica cultivar-group) Os02g0773600 (Os02g0773600) mRNA, complete cds Length = 2139 Score = 264 bits (133), Expect = 6e-67 Identities = 199/221 (90%) Strand = Plus / Plus Query: 531 acggcggcagcggtggtggcgtcaagaagcggcgcagcgcggcggtgctgatggaagggt 590 |||||||| |||| || || | |||||||||||| || |||||||||||||||| |||| Sbjct: 1841 acggcggcggcggcggcggagccaagaagcggcgtggcccggcggtgctgatggaggggt 1900 Query: 591 cgcggtgcagccgcatgaatgggcgcgggtggcgctgcagccagccgacgctggtcgggt 650 | || ||||||||| |||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 1901 cacgttgcagccgcgtgaacgggcgcgggtggcgctgcagccagccgacgctggtcggct 1960 Query: 651 actccctctgcgagcaccacctcggcaagggccggatgcggagcgtgagcggtgggcgcg 710 |||||||||||||||||||||||||||||||||||||||||||||| | ||| || |||| Sbjct: 1961 actccctctgcgagcaccacctcggcaagggccggatgcggagcgtcaccggcggccgcg 2020 Query: 711 gcggcgccaaccagctcggccgcaccgagcacaggaagaac 751 |||||||| |||||||||||||||||||| ||||||||| Sbjct: 2021 gcggcgccggccagctcggccgcaccgagccgaggaagaac 2061 Score = 91.7 bits (46), Expect = 5e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 224 gaggaggagaacaagtcggaggagttgcacttgcacccaaatgtggatcttgcggacgac 283 ||||||||||| ||||||||| |||||||||||||||||||| ||||||||| |||||| Sbjct: 1528 gaggaggagaagaagtcggagcggttgcacttgcacccaaatgcggatcttgccgacgac 1587 Query: 284 gaatcctcggtggtgaggcgcgcggc 309 || || |||| || || ||||||||| Sbjct: 1588 gactcgtcggcggcgatgcgcgcggc 1613 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 264 bits (133), Expect = 6e-67 Identities = 199/221 (90%) Strand = Plus / Minus Query: 531 acggcggcagcggtggtggcgtcaagaagcggcgcagcgcggcggtgctgatggaagggt 590 |||||||| |||| || || | |||||||||||| || |||||||||||||||| |||| Sbjct: 32685134 acggcggcggcggcggcggagccaagaagcggcgtggcccggcggtgctgatggaggggt 32685075 Query: 591 cgcggtgcagccgcatgaatgggcgcgggtggcgctgcagccagccgacgctggtcgggt 650 | || ||||||||| |||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 32685074 cacgttgcagccgcgtgaacgggcgcgggtggcgctgcagccagccgacgctggtcggct 32685015 Query: 651 actccctctgcgagcaccacctcggcaagggccggatgcggagcgtgagcggtgggcgcg 710 |||||||||||||||||||||||||||||||||||||||||||||| | ||| || |||| Sbjct: 32685014 actccctctgcgagcaccacctcggcaagggccggatgcggagcgtcaccggcggccgcg 32684955 Query: 711 gcggcgccaaccagctcggccgcaccgagcacaggaagaac 751 |||||||| |||||||||||||||||||| ||||||||| Sbjct: 32684954 gcggcgccggccagctcggccgcaccgagccgaggaagaac 32684914 Score = 99.6 bits (50), Expect = 2e-17 Identities = 50/50 (100%) Strand = Plus / Minus Query: 5 cccaaagcccccctcctttaatttgcaccctccccaaatctccattgctc 54 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32686540 cccaaagcccccctcctttaatttgcaccctccccaaatctccattgctc 32686491 Score = 95.6 bits (48), Expect = 3e-16 Identities = 106/124 (85%), Gaps = 6/124 (4%) Strand = Plus / Minus Query: 54 ctccttctcaccctccctctccttctctttctcatccgtccatgaggatcaggaggaggc 113 ||||||||| || || ||||| | ||| |||||||| |||||||||||||||||| ||| Sbjct: 32686462 ctccttctccccttctctctctctttctctctcatccatccatgaggatcaggaggcggc 32686403 Query: 114 ctcaggcc---caggctctctcctccctgcagc---cctcagatccatccactgcacccc 167 ||||| || |||||||||||||||||||| | ||||||||||||||||||| |||| Sbjct: 32686402 ctcagtccctgcaggctctctcctccctgcatccctcctcagatccatccactgctcccc 32686343 Query: 168 agcc 171 |||| Sbjct: 32686342 agcc 32686339 Score = 91.7 bits (46), Expect = 5e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 224 gaggaggagaacaagtcggaggagttgcacttgcacccaaatgtggatcttgcggacgac 283 ||||||||||| ||||||||| |||||||||||||||||||| ||||||||| |||||| Sbjct: 32686289 gaggaggagaagaagtcggagcggttgcacttgcacccaaatgcggatcttgccgacgac 32686230 Query: 284 gaatcctcggtggtgaggcgcgcggc 309 || || |||| || || ||||||||| Sbjct: 32686229 gactcgtcggcggcgatgcgcgcggc 32686204 >dbj|AP004853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1448_G06 Length = 136823 Score = 264 bits (133), Expect = 6e-67 Identities = 199/221 (90%) Strand = Plus / Minus Query: 531 acggcggcagcggtggtggcgtcaagaagcggcgcagcgcggcggtgctgatggaagggt 590 |||||||| |||| || || | |||||||||||| || |||||||||||||||| |||| Sbjct: 13369 acggcggcggcggcggcggagccaagaagcggcgtggcccggcggtgctgatggaggggt 13310 Query: 591 cgcggtgcagccgcatgaatgggcgcgggtggcgctgcagccagccgacgctggtcgggt 650 | || ||||||||| |||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 13309 cacgttgcagccgcgtgaacgggcgcgggtggcgctgcagccagccgacgctggtcggct 13250 Query: 651 actccctctgcgagcaccacctcggcaagggccggatgcggagcgtgagcggtgggcgcg 710 |||||||||||||||||||||||||||||||||||||||||||||| | ||| || |||| Sbjct: 13249 actccctctgcgagcaccacctcggcaagggccggatgcggagcgtcaccggcggccgcg 13190 Query: 711 gcggcgccaaccagctcggccgcaccgagcacaggaagaac 751 |||||||| |||||||||||||||||||| ||||||||| Sbjct: 13189 gcggcgccggccagctcggccgcaccgagccgaggaagaac 13149 Score = 99.6 bits (50), Expect = 2e-17 Identities = 50/50 (100%) Strand = Plus / Minus Query: 5 cccaaagcccccctcctttaatttgcaccctccccaaatctccattgctc 54 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14775 cccaaagcccccctcctttaatttgcaccctccccaaatctccattgctc 14726 Score = 95.6 bits (48), Expect = 3e-16 Identities = 106/124 (85%), Gaps = 6/124 (4%) Strand = Plus / Minus Query: 54 ctccttctcaccctccctctccttctctttctcatccgtccatgaggatcaggaggaggc 113 ||||||||| || || ||||| | ||| |||||||| |||||||||||||||||| ||| Sbjct: 14697 ctccttctccccttctctctctctttctctctcatccatccatgaggatcaggaggcggc 14638 Query: 114 ctcaggcc---caggctctctcctccctgcagc---cctcagatccatccactgcacccc 167 ||||| || |||||||||||||||||||| | ||||||||||||||||||| |||| Sbjct: 14637 ctcagtccctgcaggctctctcctccctgcatccctcctcagatccatccactgctcccc 14578 Query: 168 agcc 171 |||| Sbjct: 14577 agcc 14574 Score = 91.7 bits (46), Expect = 5e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 224 gaggaggagaacaagtcggaggagttgcacttgcacccaaatgtggatcttgcggacgac 283 ||||||||||| ||||||||| |||||||||||||||||||| ||||||||| |||||| Sbjct: 14524 gaggaggagaagaagtcggagcggttgcacttgcacccaaatgcggatcttgccgacgac 14465 Query: 284 gaatcctcggtggtgaggcgcgcggc 309 || || |||| || || ||||||||| Sbjct: 14464 gactcgtcggcggcgatgcgcgcggc 14439 >dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 264 bits (133), Expect = 6e-67 Identities = 199/221 (90%) Strand = Plus / Minus Query: 531 acggcggcagcggtggtggcgtcaagaagcggcgcagcgcggcggtgctgatggaagggt 590 |||||||| |||| || || | |||||||||||| || |||||||||||||||| |||| Sbjct: 112505 acggcggcggcggcggcggagccaagaagcggcgtggcccggcggtgctgatggaggggt 112446 Query: 591 cgcggtgcagccgcatgaatgggcgcgggtggcgctgcagccagccgacgctggtcgggt 650 | || ||||||||| |||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 112445 cacgttgcagccgcgtgaacgggcgcgggtggcgctgcagccagccgacgctggtcggct 112386 Query: 651 actccctctgcgagcaccacctcggcaagggccggatgcggagcgtgagcggtgggcgcg 710 |||||||||||||||||||||||||||||||||||||||||||||| | ||| || |||| Sbjct: 112385 actccctctgcgagcaccacctcggcaagggccggatgcggagcgtcaccggcggccgcg 112326 Query: 711 gcggcgccaaccagctcggccgcaccgagcacaggaagaac 751 |||||||| |||||||||||||||||||| ||||||||| Sbjct: 112325 gcggcgccggccagctcggccgcaccgagccgaggaagaac 112285 Score = 99.6 bits (50), Expect = 2e-17 Identities = 50/50 (100%) Strand = Plus / Minus Query: 5 cccaaagcccccctcctttaatttgcaccctccccaaatctccattgctc 54 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113911 cccaaagcccccctcctttaatttgcaccctccccaaatctccattgctc 113862 Score = 95.6 bits (48), Expect = 3e-16 Identities = 106/124 (85%), Gaps = 6/124 (4%) Strand = Plus / Minus Query: 54 ctccttctcaccctccctctccttctctttctcatccgtccatgaggatcaggaggaggc 113 ||||||||| || || ||||| | ||| |||||||| |||||||||||||||||| ||| Sbjct: 113833 ctccttctccccttctctctctctttctctctcatccatccatgaggatcaggaggcggc 113774 Query: 114 ctcaggcc---caggctctctcctccctgcagc---cctcagatccatccactgcacccc 167 ||||| || |||||||||||||||||||| | ||||||||||||||||||| |||| Sbjct: 113773 ctcagtccctgcaggctctctcctccctgcatccctcctcagatccatccactgctcccc 113714 Query: 168 agcc 171 |||| Sbjct: 113713 agcc 113710 Score = 91.7 bits (46), Expect = 5e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 224 gaggaggagaacaagtcggaggagttgcacttgcacccaaatgtggatcttgcggacgac 283 ||||||||||| ||||||||| |||||||||||||||||||| ||||||||| |||||| Sbjct: 113660 gaggaggagaagaagtcggagcggttgcacttgcacccaaatgcggatcttgccgacgac 113601 Query: 284 gaatcctcggtggtgaggcgcgcggc 309 || || |||| || || ||||||||| Sbjct: 113600 gactcgtcggcggcgatgcgcgcggc 113575 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 170 bits (86), Expect = 7e-39 Identities = 157/182 (86%), Gaps = 9/182 (4%) Strand = Plus / Plus Query: 570 cggcggtgctgatggaagggtcgcggtgcagccgcatgaatgggcgcgggtggcgctgca 629 |||||||||||||||| ||||| |||||||||||| |||| ||||| |||||||| |||| Sbjct: 5469809 cggcggtgctgatggaggggtcacggtgcagccgcgtgaacgggcgagggtggcggtgca 5469868 Query: 630 gccagccgacgctggtcgggtactccctctgcgagcaccacctcggcaagggccggatgc 689 ||||||||||||| ||||| ||| | |||||||||||||||||||||||||| |||||| Sbjct: 5469869 gccagccgacgctcgtcggctacgcgctctgcgagcaccacctcggcaagggaaggatgc 5469928 Query: 690 ggagcgtga---------gcggtgggcgcggcggcgccaaccagctcggccgcaccgagc 740 ||||||| | |||| || ||||||||||||| |||||||||||||||||||| Sbjct: 5469929 ggagcgtcaccggcggcggcgggggacgcggcggcgccagccagctcggccgcaccgagc 5469988 Query: 741 ac 742 || Sbjct: 5469989 ac 5469990