BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf027j10 (1156 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome... 244 7e-61 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 244 7e-61 emb|CT832832.1| Oryza sativa (indica cultivar-group) cDNA clone:... 194 6e-46 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 194 6e-46 dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic D... 194 6e-46 >gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11, complete sequence Length = 169728 Score = 244 bits (123), Expect = 7e-61 Identities = 153/163 (93%) Strand = Plus / Minus Query: 451 cccgcggcggactgcgccgtctgcatcacggagctcgccgccggggaggccgcgcgcctg 510 |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || Sbjct: 75809 cccgcggcggactgcgccgtctgcatcacggagctcgccgccggggagtccgcccgcgtg 75750 Query: 511 ctgccgcggtgcggccacgggttccacgtcgagtgcgtcgacatgtggctccggtcgcac 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 75749 ctgccgcggtgcggccacgggttccacgtcgagtgcgtcgacatgtggctccggtcaaac 75690 Query: 571 tccacctgcccgctctgccggtgcccggtcgtccacgaggcgc 613 |||||||||||||||||||| ||| | ||| || ||||||||| Sbjct: 75689 tccacctgcccgctctgccgctgcgccgtcatcgacgaggcgc 75647 Score = 208 bits (105), Expect = 4e-50 Identities = 227/264 (85%), Gaps = 9/264 (3%) Strand = Plus / Minus Query: 166 ggatcgatggcggtgacggggacgtcggcggcggcggcggcgacgatgctggcggctgcg 225 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| Sbjct: 76112 ggatcgatggcggtgacggggacgtcggtggcggccgcggcgacgatgctggcggcggcg 76053 Query: 226 gcggccatcttcatcaccttcgtactctgcttctacctcttcctctgcgccaagcgctac 285 ||||| ||||||||||| ||||| | ||||||||||||||||||||||||||| | ||| Sbjct: 76052 gcggcgatcttcatcacgttcgtcgtgtgcttctacctcttcctctgcgccaagaggtac 75993 Query: 286 cgcggcgccgcgcctaccatcggcggtggcggtggcggtgaagcggagggcaggggccgg 345 |||||||||||||| || |||||| |||| |||||| | |||||| ||||| || Sbjct: 75992 cgcggcgccgcgcccacgatcggc---ggcgacagcggtg--ggggaggg-aggggacgc 75939 Query: 346 gcgcggttcgtgttcgcggggcccggggacgcgggctgc---cacgggaggggcctggac 402 |||||||||||||||| ||| |||||||||| || ||| ||||||||| || ||| Sbjct: 75938 gcgcggttcgtgttcgggggccccggggacggcgggtgcggaggcgggagggggcttgac 75879 Query: 403 gaggcggccatcgcagcgctgccg 426 |||||||||||||| ||||||||| Sbjct: 75878 gaggcggccatcgcggcgctgccg 75855 Score = 155 bits (78), Expect = 5e-34 Identities = 158/185 (85%), Gaps = 6/185 (3%) Strand = Plus / Minus Query: 757 ccgcagccggcgccgggaccgatcgccggggtcgcggccgtcgtggaggcggcaagaata 816 ||||||||| || ||||||| |||||||| ||||| ||||| ||||| ||||| || ||| Sbjct: 75473 ccgcagccgtcggcgggacccatcgccggagtcgccgccgtggtggaagcggcgaggata 75414 Query: 817 gcggccctgcggcggctgctcggctgcggcggggcga------cgcccccgccgccgccg 870 |||||||||||||||||||| ||||||||||| |||| ||||||||||| ||||| Sbjct: 75413 gcggccctgcggcggctgctgggctgcggcggcgcgactcccccgcccccgccggcgccg 75354 Query: 871 ccgcaggcggaccgtgacatggagatgggcctcgccagcggagagagcagcgcgtcgccg 930 |||||| ||||| ||| |||||||||||||| || |||| |||||||||||||||| | Sbjct: 75353 gcgcagggcgaccgcgacgtggagatgggcctccccggcggcgagagcagcgcgtcgcgg 75294 Query: 931 ccggc 935 ||||| Sbjct: 75293 ccggc 75289 Score = 109 bits (55), Expect = 3e-20 Identities = 91/103 (88%) Strand = Plus / Minus Query: 611 cgccggccgtgcagccgccggaggccgacccggagtcccccaacttcccgaccaacgtgc 670 |||| ||||||| ||||||||||| ||| ||||||| ||||||||||| |||||||||| Sbjct: 75637 cgcccgccgtgcgcccgccggaggctgacgcggagtcgcccaacttccccaccaacgtgc 75578 Query: 671 tcttcttcggctcccaggatgccgtgagaaccggcggtgccgc 713 ||||||||||||||||||| ||||| || || ||||| ||||| Sbjct: 75577 tcttcttcggctcccaggacgccgtcaggacaggcggcgccgc 75535 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 244 bits (123), Expect = 7e-61 Identities = 153/163 (93%) Strand = Plus / Plus Query: 451 cccgcggcggactgcgccgtctgcatcacggagctcgccgccggggaggccgcgcgcctg 510 |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || Sbjct: 15969142 cccgcggcggactgcgccgtctgcatcacggagctcgccgccggggagtccgcccgcgtg 15969201 Query: 511 ctgccgcggtgcggccacgggttccacgtcgagtgcgtcgacatgtggctccggtcgcac 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 15969202 ctgccgcggtgcggccacgggttccacgtcgagtgcgtcgacatgtggctccggtcaaac 15969261 Query: 571 tccacctgcccgctctgccggtgcccggtcgtccacgaggcgc 613 |||||||||||||||||||| ||| | ||| || ||||||||| Sbjct: 15969262 tccacctgcccgctctgccgctgcgccgtcatcgacgaggcgc 15969304 Score = 208 bits (105), Expect = 4e-50 Identities = 227/264 (85%), Gaps = 9/264 (3%) Strand = Plus / Plus Query: 166 ggatcgatggcggtgacggggacgtcggcggcggcggcggcgacgatgctggcggctgcg 225 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| Sbjct: 15968839 ggatcgatggcggtgacggggacgtcggtggcggccgcggcgacgatgctggcggcggcg 15968898 Query: 226 gcggccatcttcatcaccttcgtactctgcttctacctcttcctctgcgccaagcgctac 285 ||||| ||||||||||| ||||| | ||||||||||||||||||||||||||| | ||| Sbjct: 15968899 gcggcgatcttcatcacgttcgtcgtgtgcttctacctcttcctctgcgccaagaggtac 15968958 Query: 286 cgcggcgccgcgcctaccatcggcggtggcggtggcggtgaagcggagggcaggggccgg 345 |||||||||||||| || |||||| |||| |||||| | |||||| ||||| || Sbjct: 15968959 cgcggcgccgcgcccacgatcggc---ggcgacagcggtg--ggggaggg-aggggacgc 15969012 Query: 346 gcgcggttcgtgttcgcggggcccggggacgcgggctgc---cacgggaggggcctggac 402 |||||||||||||||| ||| |||||||||| || ||| ||||||||| || ||| Sbjct: 15969013 gcgcggttcgtgttcgggggccccggggacggcgggtgcggaggcgggagggggcttgac 15969072 Query: 403 gaggcggccatcgcagcgctgccg 426 |||||||||||||| ||||||||| Sbjct: 15969073 gaggcggccatcgcggcgctgccg 15969096 Score = 155 bits (78), Expect = 5e-34 Identities = 158/185 (85%), Gaps = 6/185 (3%) Strand = Plus / Plus Query: 757 ccgcagccggcgccgggaccgatcgccggggtcgcggccgtcgtggaggcggcaagaata 816 ||||||||| || ||||||| |||||||| ||||| ||||| ||||| ||||| || ||| Sbjct: 15969478 ccgcagccgtcggcgggacccatcgccggagtcgccgccgtggtggaagcggcgaggata 15969537 Query: 817 gcggccctgcggcggctgctcggctgcggcggggcga------cgcccccgccgccgccg 870 |||||||||||||||||||| ||||||||||| |||| ||||||||||| ||||| Sbjct: 15969538 gcggccctgcggcggctgctgggctgcggcggcgcgactcccccgcccccgccggcgccg 15969597 Query: 871 ccgcaggcggaccgtgacatggagatgggcctcgccagcggagagagcagcgcgtcgccg 930 |||||| ||||| ||| |||||||||||||| || |||| |||||||||||||||| | Sbjct: 15969598 gcgcagggcgaccgcgacgtggagatgggcctccccggcggcgagagcagcgcgtcgcgg 15969657 Query: 931 ccggc 935 ||||| Sbjct: 15969658 ccggc 15969662 Score = 109 bits (55), Expect = 3e-20 Identities = 91/103 (88%) Strand = Plus / Plus Query: 611 cgccggccgtgcagccgccggaggccgacccggagtcccccaacttcccgaccaacgtgc 670 |||| ||||||| ||||||||||| ||| ||||||| ||||||||||| |||||||||| Sbjct: 15969314 cgcccgccgtgcgcccgccggaggctgacgcggagtcgcccaacttccccaccaacgtgc 15969373 Query: 671 tcttcttcggctcccaggatgccgtgagaaccggcggtgccgc 713 ||||||||||||||||||| ||||| || || ||||| ||||| Sbjct: 15969374 tcttcttcggctcccaggacgccgtcaggacaggcggcgccgc 15969416 Score = 81.8 bits (41), Expect = 6e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 518 ggtgcggccacgggttccacgtcgagtgcgtcgacatgtggctccggtcgcactccacct 577 ||||||| ||| | ||||||| |||||||||||||| |||| ||||||||||| |||| | Sbjct: 12624524 ggtgcgggcaccgcttccacgccgagtgcgtcgacaagtggttccggtcgcacgccacat 12624583 Query: 578 gcccgctctgccg 590 ||||||||||||| Sbjct: 12624584 gcccgctctgccg 12624596 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 853 acgcccccgccgccgccgccgcaggcggaccgtgacatggagatgggcctcgccagcgga 912 |||||||||||| ||||| ||||||| ||||| ||| |||||||||||||| | |||| Sbjct: 23437852 acgcccccgccggcgccgacgcaggccgaccgcgacgtggagatgggcctcctcggcggc 23437911 Query: 913 gagagcagcgcgtcgc 928 |||||||||||||||| Sbjct: 23437912 gagagcagcgcgtcgc 23437927 >emb|CT832832.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN039C10, full insert sequence Length = 1456 Score = 194 bits (98), Expect = 6e-46 Identities = 146/162 (90%) Strand = Plus / Plus Query: 454 gcggcggactgcgccgtctgcatcacggagctcgccgccggggaggccgcgcgcctgctg 513 |||| ||||||||| || |||||||||||||||||||| |||||| | |||||| ||||| Sbjct: 537 gcggtggactgcgcggtgtgcatcacggagctcgccgcgggggagacggcgcgcgtgctg 596 Query: 514 ccgcggtgcggccacgggttccacgtcgagtgcgtcgacatgtggctccggtcgcactcc 573 |||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| Sbjct: 597 ccgcggtgcggccacgggttccacgtcgcgtgcgtcgacatgtggctcaagtcccactcc 656 Query: 574 acctgcccgctctgccggtgcccggtcgtccacgaggcgccg 615 ||||||||||||||||| ||||| | |||| ||||| ||||| Sbjct: 657 acctgcccgctctgccgctgccccgccgtcgacgagccgccg 698 Score = 111 bits (56), Expect = 6e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 624 gccgccggaggccgacccggagtcccccaacttcccgaccaacgtgctcttcttcggctc 683 |||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 725 gccgcccgaggccgacccggagtcccccaacttccccaccaacgtcctcttcttcggctc 784 Query: 684 ccaggatgccgtgagaaccggcgg 707 |||||| | ||||| |||||||| Sbjct: 785 ccaggacgaggtgagcaccggcgg 808 Score = 81.8 bits (41), Expect = 6e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 171 gatggcggtgacggggacgtcggcggcggcggcggcgacgatgctggcggctgcggcggc 230 |||||||||||||| |||| ||| |||||||||| |||||||| ||||||| | |||||| Sbjct: 242 gatggcggtgacggcgacgacggtggcggcggcgacgacgatgatggcggcggtggcggc 301 Query: 231 catcttcatcaccttcgtactctgcttctacctcttcctctgcgccaag 279 | | ||| | | ||||| |||||||||||| | ||| ||||||||||| Sbjct: 302 cgtgttcctggcgttcgtgctctgcttctacatattcgtctgcgccaag 350 >dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 194 bits (98), Expect = 6e-46 Identities = 146/162 (90%) Strand = Plus / Minus Query: 454 gcggcggactgcgccgtctgcatcacggagctcgccgccggggaggccgcgcgcctgctg 513 |||| ||||||||| || |||||||||||||||||||| |||||| | |||||| ||||| Sbjct: 25451467 gcggtggactgcgcggtgtgcatcacggagctcgccgcgggggagacggcgcgcgtgctg 25451408 Query: 514 ccgcggtgcggccacgggttccacgtcgagtgcgtcgacatgtggctccggtcgcactcc 573 |||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| Sbjct: 25451407 ccgcggtgcggccacgggttccacgtcgcgtgcgtcgacatgtggctcaagtcccactcc 25451348 Query: 574 acctgcccgctctgccggtgcccggtcgtccacgaggcgccg 615 ||||||||||||||||| ||||| | |||| ||||| ||||| Sbjct: 25451347 acctgcccgctctgccgctgccccgccgtcgacgagccgccg 25451306 Score = 111 bits (56), Expect = 6e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 624 gccgccggaggccgacccggagtcccccaacttcccgaccaacgtgctcttcttcggctc 683 |||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 25451279 gccgcccgaggccgacccggagtcccccaacttccccaccaacgtcctcttcttcggctc 25451220 Query: 684 ccaggatgccgtgagaaccggcgg 707 |||||| | ||||| |||||||| Sbjct: 25451219 ccaggacgaggtgagcaccggcgg 25451196 Score = 85.7 bits (43), Expect = 4e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 517 cggtgcggccacgggttccacgtcgagtgcgtcgacatgtggctccggtcgcactccacc 576 |||||||||||||| ||||||| ||| ||||||||||||||| || | || ||||||||| Sbjct: 2391951 cggtgcggccacggcttccacgccgaatgcgtcgacatgtgggtcggctcccactccacc 2392010 Query: 577 tgcccgctctg 587 ||||||||||| Sbjct: 2392011 tgcccgctctg 2392021 >dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 194 bits (98), Expect = 6e-46 Identities = 146/162 (90%) Strand = Plus / Minus Query: 454 gcggcggactgcgccgtctgcatcacggagctcgccgccggggaggccgcgcgcctgctg 513 |||| ||||||||| || |||||||||||||||||||| |||||| | |||||| ||||| Sbjct: 144557 gcggtggactgcgcggtgtgcatcacggagctcgccgcgggggagacggcgcgcgtgctg 144498 Query: 514 ccgcggtgcggccacgggttccacgtcgagtgcgtcgacatgtggctccggtcgcactcc 573 |||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| Sbjct: 144497 ccgcggtgcggccacgggttccacgtcgcgtgcgtcgacatgtggctcaagtcccactcc 144438 Query: 574 acctgcccgctctgccggtgcccggtcgtccacgaggcgccg 615 ||||||||||||||||| ||||| | |||| ||||| ||||| Sbjct: 144437 acctgcccgctctgccgctgccccgccgtcgacgagccgccg 144396 Score = 111 bits (56), Expect = 6e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 624 gccgccggaggccgacccggagtcccccaacttcccgaccaacgtgctcttcttcggctc 683 |||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 144369 gccgcccgaggccgacccggagtcccccaacttccccaccaacgtcctcttcttcggctc 144310 Query: 684 ccaggatgccgtgagaaccggcgg 707 |||||| | ||||| |||||||| Sbjct: 144309 ccaggacgaggtgagcaccggcgg 144286