BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf027g08 (1092 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001051425.1| Oryza sativa (japonica cultivar-group) Os01g... 535 e-148 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 535 e-148 dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic D... 535 e-148 ref|NM_001062205.1| Oryza sativa (japonica cultivar-group) Os05g... 194 5e-46 gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome... 194 5e-46 >ref|NM_001051425.1| Oryza sativa (japonica cultivar-group) Os01g0863800 (Os01g0863800) mRNA, complete cds Length = 735 Score = 535 bits (270), Expect = e-148 Identities = 423/474 (89%), Gaps = 15/474 (3%) Strand = Plus / Plus Query: 259 gaccatcgcctccatcttcattgactccgccgagtcctccttaacgacttcctccgcgcg 318 |||||| |||||||||||| | |||||||||||||||||||| ||||| ||||||||||| Sbjct: 177 gaccattgcctccatcttcctcgactccgccgagtcctccttcacgacctcctccgcgcg 236 Query: 319 gcacgactgctccgacagcctctccacggtgtccgaagcgtcggcgggg---------gg 369 ||||||||||||||||||||||||||||| |||||| |||||||||||| | Sbjct: 237 gcacgactgctccgacagcctctccacggcgtccgaggcgtcggcgggggccgaggccgc 296 Query: 370 cgacacggcggacgacgccattgtgcggggcctccgctcctccgaccggctcctcttcga 429 ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 297 cgacacggccgacgacgccatcgtgcgcggcctccgctcctccgaccggctcctcttcga 356 Query: 430 ccctggcgcgtcggccacgagctccatactcgaggagaaatcatcgggcgccg---gaga 486 ||| || |||||||| |||||||||||||| |||||||| || |||| ||||| | || Sbjct: 357 cccgggagcgtcggcaacgagctccatactggaggagaagtcgtcggacgccgccggcga 416 Query: 487 ggcct---tcgtcggcggcgtggcggtggcgttcgagtcggcggacccgtacgtggactt 543 ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 417 ggcctccttcatcggcggcgtggcggtggcgttcgagtcggaggacccgtacgtggactt 476 Query: 544 ccgggcgtccatggatgagatggtggccgcgcacggggtcggggactggggttggctcga 603 ||||| ||||||||| |||||||||| ||||||||||||||| ||||||| ||||| || Sbjct: 477 ccgggtgtccatggaggagatggtggtcgcgcacggggtcggcaactggggctggctgga 536 Query: 604 gaagatgctggggtggtacctgcgcgccaacggcaaggacacgcacggcgccatcgtggc 663 | |||||||||| ||||||||||| |||||||||||||||||||||| |||||| |||| Sbjct: 537 ggagatgctgggatggtacctgcgagccaacggcaaggacacgcacgccgccatattggc 596 Query: 664 ggcgttcgtcgacgtcatcgtcgccatcgccgacccggcccgcgcgtcctgctc 717 ||||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 597 ggcgttcatcgacgtcatcgtcgccatcgccgacccggccctcgcgtcctgctc 650 Score = 101 bits (51), Expect = 6e-18 Identities = 124/147 (84%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 96 atggtcatccggaagctggccctgagttctttcttccataccaaggccaagcacacctcg 155 ||||||||| | | ||||||| |||| || |||||||| | |||||||| | |||||||| Sbjct: 1 atggtcatcggaaggctggccttgagctccttcttccacaacaaggccagggacacctcg 60 Query: 156 ccgtcaccgcctctctctccggccaccgcgcctgcgtggg-ctggccgtcattcaagcac 214 ||||| ||||||| | | ||||| ||||| ||| |||||| |||||||| | |||| || Sbjct: 61 ccgtccccgcctcccgccccggcaaccgcacctccgtgggtgtggccgtcctgcaagaac 120 Query: 215 ccaagaacgcagtccttccgcgccgcg 241 ||||| ||||||||||||||||||||| Sbjct: 121 ccaaggacgcagtccttccgcgccgcg 147 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 535 bits (270), Expect = e-148 Identities = 423/474 (89%), Gaps = 15/474 (3%) Strand = Plus / Plus Query: 259 gaccatcgcctccatcttcattgactccgccgagtcctccttaacgacttcctccgcgcg 318 |||||| |||||||||||| | |||||||||||||||||||| ||||| ||||||||||| Sbjct: 37374915 gaccattgcctccatcttcctcgactccgccgagtcctccttcacgacctcctccgcgcg 37374974 Query: 319 gcacgactgctccgacagcctctccacggtgtccgaagcgtcggcgggg---------gg 369 ||||||||||||||||||||||||||||| |||||| |||||||||||| | Sbjct: 37374975 gcacgactgctccgacagcctctccacggcgtccgaggcgtcggcgggggccgaggccgc 37375034 Query: 370 cgacacggcggacgacgccattgtgcggggcctccgctcctccgaccggctcctcttcga 429 ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 37375035 cgacacggccgacgacgccatcgtgcgcggcctccgctcctccgaccggctcctcttcga 37375094 Query: 430 ccctggcgcgtcggccacgagctccatactcgaggagaaatcatcgggcgccg---gaga 486 ||| || |||||||| |||||||||||||| |||||||| || |||| ||||| | || Sbjct: 37375095 cccgggagcgtcggcaacgagctccatactggaggagaagtcgtcggacgccgccggcga 37375154 Query: 487 ggcct---tcgtcggcggcgtggcggtggcgttcgagtcggcggacccgtacgtggactt 543 ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 37375155 ggcctccttcatcggcggcgtggcggtggcgttcgagtcggaggacccgtacgtggactt 37375214 Query: 544 ccgggcgtccatggatgagatggtggccgcgcacggggtcggggactggggttggctcga 603 ||||| ||||||||| |||||||||| ||||||||||||||| ||||||| ||||| || Sbjct: 37375215 ccgggtgtccatggaggagatggtggtcgcgcacggggtcggcaactggggctggctgga 37375274 Query: 604 gaagatgctggggtggtacctgcgcgccaacggcaaggacacgcacggcgccatcgtggc 663 | |||||||||| ||||||||||| |||||||||||||||||||||| |||||| |||| Sbjct: 37375275 ggagatgctgggatggtacctgcgagccaacggcaaggacacgcacgccgccatattggc 37375334 Query: 664 ggcgttcgtcgacgtcatcgtcgccatcgccgacccggcccgcgcgtcctgctc 717 ||||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 37375335 ggcgttcatcgacgtcatcgtcgccatcgccgacccggccctcgcgtcctgctc 37375388 Score = 109 bits (55), Expect = 2e-20 Identities = 128/151 (84%), Gaps = 1/151 (0%) Strand = Plus / Plus Query: 92 accaatggtcatccggaagctggccctgagttctttcttccataccaaggccaagcacac 151 ||||||||||||| | | ||||||| |||| || |||||||| | |||||||| | |||| Sbjct: 37374735 accaatggtcatcggaaggctggccttgagctccttcttccacaacaaggccagggacac 37374794 Query: 152 ctcgccgtcaccgcctctctctccggccaccgcgcctgcgtggg-ctggccgtcattcaa 210 ||||||||| ||||||| | | ||||| ||||| ||| |||||| |||||||| | ||| Sbjct: 37374795 ctcgccgtccccgcctcccgccccggcaaccgcacctccgtgggtgtggccgtcctgcaa 37374854 Query: 211 gcacccaagaacgcagtccttccgcgccgcg 241 | ||||||| ||||||||||||||||||||| Sbjct: 37374855 gaacccaaggacgcagtccttccgcgccgcg 37374885 >dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08 Length = 151490 Score = 535 bits (270), Expect = e-148 Identities = 423/474 (89%), Gaps = 15/474 (3%) Strand = Plus / Plus Query: 259 gaccatcgcctccatcttcattgactccgccgagtcctccttaacgacttcctccgcgcg 318 |||||| |||||||||||| | |||||||||||||||||||| ||||| ||||||||||| Sbjct: 86949 gaccattgcctccatcttcctcgactccgccgagtcctccttcacgacctcctccgcgcg 87008 Query: 319 gcacgactgctccgacagcctctccacggtgtccgaagcgtcggcgggg---------gg 369 ||||||||||||||||||||||||||||| |||||| |||||||||||| | Sbjct: 87009 gcacgactgctccgacagcctctccacggcgtccgaggcgtcggcgggggccgaggccgc 87068 Query: 370 cgacacggcggacgacgccattgtgcggggcctccgctcctccgaccggctcctcttcga 429 ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 87069 cgacacggccgacgacgccatcgtgcgcggcctccgctcctccgaccggctcctcttcga 87128 Query: 430 ccctggcgcgtcggccacgagctccatactcgaggagaaatcatcgggcgccg---gaga 486 ||| || |||||||| |||||||||||||| |||||||| || |||| ||||| | || Sbjct: 87129 cccgggagcgtcggcaacgagctccatactggaggagaagtcgtcggacgccgccggcga 87188 Query: 487 ggcct---tcgtcggcggcgtggcggtggcgttcgagtcggcggacccgtacgtggactt 543 ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 87189 ggcctccttcatcggcggcgtggcggtggcgttcgagtcggaggacccgtacgtggactt 87248 Query: 544 ccgggcgtccatggatgagatggtggccgcgcacggggtcggggactggggttggctcga 603 ||||| ||||||||| |||||||||| ||||||||||||||| ||||||| ||||| || Sbjct: 87249 ccgggtgtccatggaggagatggtggtcgcgcacggggtcggcaactggggctggctgga 87308 Query: 604 gaagatgctggggtggtacctgcgcgccaacggcaaggacacgcacggcgccatcgtggc 663 | |||||||||| ||||||||||| |||||||||||||||||||||| |||||| |||| Sbjct: 87309 ggagatgctgggatggtacctgcgagccaacggcaaggacacgcacgccgccatattggc 87368 Query: 664 ggcgttcgtcgacgtcatcgtcgccatcgccgacccggcccgcgcgtcctgctc 717 ||||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 87369 ggcgttcatcgacgtcatcgtcgccatcgccgacccggccctcgcgtcctgctc 87422 Score = 109 bits (55), Expect = 2e-20 Identities = 128/151 (84%), Gaps = 1/151 (0%) Strand = Plus / Plus Query: 92 accaatggtcatccggaagctggccctgagttctttcttccataccaaggccaagcacac 151 ||||||||||||| | | ||||||| |||| || |||||||| | |||||||| | |||| Sbjct: 86769 accaatggtcatcggaaggctggccttgagctccttcttccacaacaaggccagggacac 86828 Query: 152 ctcgccgtcaccgcctctctctccggccaccgcgcctgcgtggg-ctggccgtcattcaa 210 ||||||||| ||||||| | | ||||| ||||| ||| |||||| |||||||| | ||| Sbjct: 86829 ctcgccgtccccgcctcccgccccggcaaccgcacctccgtgggtgtggccgtcctgcaa 86888 Query: 211 gcacccaagaacgcagtccttccgcgccgcg 241 | ||||||| ||||||||||||||||||||| Sbjct: 86889 gaacccaaggacgcagtccttccgcgccgcg 86919 >ref|NM_001062205.1| Oryza sativa (japonica cultivar-group) Os05g0441400 (Os05g0441400) mRNA, complete cds Length = 1120 Score = 194 bits (98), Expect = 5e-46 Identities = 164/186 (88%) Strand = Plus / Plus Query: 491 ttcgtcggcggcgtggcggtggcgttcgagtcggcggacccgtacgtggacttccgggcg 550 |||| ||||||||| |||||||||||||| |||| ||| ||||||| ||||||||||||| Sbjct: 544 ttcggcggcggcgtcgcggtggcgttcgactcggaggatccgtacgaggacttccgggcg 603 Query: 551 tccatggatgagatggtggccgcgcacggggtcggggactggggttggctcgagaagatg 610 ||||||| |||||| ||||||||||||| || || |||||||| ||||| ||| ||| Sbjct: 604 tccatggcggagatgctggccgcgcacggcgtgggcgactggggctggctggaggccatg 663 Query: 611 ctggggtggtacctgcgcgccaacggcaaggacacgcacggcgccatcgtggcggcgttc 670 || ||||||||||| ||||||||||||||||| ||||||| ||||||||| ||||||||| Sbjct: 664 ctagggtggtacctccgcgccaacggcaaggagacgcacgccgccatcgtcgcggcgttc 723 Query: 671 gtcgac 676 |||||| Sbjct: 724 gtcgac 729 >gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0020H14, complete sequence Length = 185623 Score = 194 bits (98), Expect = 5e-46 Identities = 164/186 (88%) Strand = Plus / Minus Query: 491 ttcgtcggcggcgtggcggtggcgttcgagtcggcggacccgtacgtggacttccgggcg 550 |||| ||||||||| |||||||||||||| |||| ||| ||||||| ||||||||||||| Sbjct: 19679 ttcggcggcggcgtcgcggtggcgttcgactcggaggatccgtacgaggacttccgggcg 19620 Query: 551 tccatggatgagatggtggccgcgcacggggtcggggactggggttggctcgagaagatg 610 ||||||| |||||| ||||||||||||| || || |||||||| ||||| ||| ||| Sbjct: 19619 tccatggcggagatgctggccgcgcacggcgtgggcgactggggctggctggaggccatg 19560 Query: 611 ctggggtggtacctgcgcgccaacggcaaggacacgcacggcgccatcgtggcggcgttc 670 || ||||||||||| ||||||||||||||||| ||||||| ||||||||| ||||||||| Sbjct: 19559 ctagggtggtacctccgcgccaacggcaaggagacgcacgccgccatcgtcgcggcgttc 19500 Query: 671 gtcgac 676 |||||| Sbjct: 19499 gtcgac 19494