BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf026j20 (970 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT835214.1| Oryza sativa (indica cultivar-group) cDNA clone:... 492 e-135 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 339 1e-89 gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 genom... 339 1e-89 ref|NM_001056873.1| Oryza sativa (japonica cultivar-group) Os03g... 335 2e-88 gb|AY110973.1| Zea mays CL36418_1 mRNA sequence 210 8e-51 >emb|CT835214.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA022K20, full insert sequence Length = 1001 Score = 492 bits (248), Expect = e-135 Identities = 386/432 (89%) Strand = Plus / Plus Query: 90 gcggacgagccccgcgacgcgcgggtggtgagggagctcctccggtcgatggggctcggc 149 ||||||||||||||||||||||| |||||| |||||||||| || || |||||||| || Sbjct: 172 gcggacgagccccgcgacgcgcgcgtggtgcgggagctcctgcgctccatggggctgagc 231 Query: 150 gagggcgagtacgagccgcgcgtcgtgcaccagttcctggacctggcctaccgctacgtc 209 ||||| |||||||||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 232 gagggggagtacgagccgcgggtggtgcaccagttcctcgacctggcctaccgctacgtc 291 Query: 210 ggcgacgtgctcggtgacgcgcaggtctacgccgaccatgcaggcaagacccagctcgac 269 |||||||||||||| ||||| ||||||||||||||||| || || ||| ||||||| ||| Sbjct: 292 ggcgacgtgctcggggacgcccaggtctacgccgaccacgcggggaagccccagcttgac 351 Query: 270 gccgacgacgtccgcctcgccatccaggccaaggtcaacttctcattctcccagccgccg 329 ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 352 gccgacgacgtccgcctcgccatccagtccaaggtcaacttctccttctcccagccgccg 411 Query: 330 ccccgcgaggttctccttgagttggcacgcagccgaaacaaaatcccgctgccgaagtct 389 ||||||||||||||||||||| ||||||| | ||| |||||||||||||| || ||||| Sbjct: 412 ccccgcgaggttctccttgaggtggcacggaaccggaacaaaatcccgctacccaagtcg 471 Query: 390 attgctccacctggctcgattcctctgccgcctgagcaggacacgctgttgagccaaaac 449 ||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 472 attgctccacctggctcaattcctctgccaccagagcaggacacgctgttgagccaaaat 531 Query: 450 tatcaactcttacccccgttgaagccaccgcttccagatgacgaaccagaagatgacaac 509 || || ||| || | |||||||||||||||| || ||| ||| ||||||||||||| Sbjct: 532 taccagctcctagctccgttgaagccaccgcctcagtttgaagaaacagaagatgacaat 591 Query: 510 gagggagccaac 521 | ||||||||| Sbjct: 592 gcaggagccaac 603 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 339 bits (171), Expect = 1e-89 Identities = 231/251 (92%) Strand = Plus / Plus Query: 90 gcggacgagccccgcgacgcgcgggtggtgagggagctcctccggtcgatggggctcggc 149 ||||||||||||||||||||||| |||||| |||||||||| || || |||||||| || Sbjct: 16600281 gcggacgagccccgcgacgcgcgcgtggtgcgggagctcctgcgctccatggggctgagc 16600340 Query: 150 gagggcgagtacgagccgcgcgtcgtgcaccagttcctggacctggcctaccgctacgtc 209 ||||| |||||||||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 16600341 gagggggagtacgagccgcgggtggtgcaccagttcctcgacctggcctaccgctacgtc 16600400 Query: 210 ggcgacgtgctcggtgacgcgcaggtctacgccgaccatgcaggcaagacccagctcgac 269 |||||||||||||| ||||| ||||||||||||||||| || || ||| ||||||| ||| Sbjct: 16600401 ggcgacgtgctcggggacgcccaggtctacgccgaccacgcggggaagccccagcttgac 16600460 Query: 270 gccgacgacgtccgcctcgccatccaggccaaggtcaacttctcattctcccagccgccg 329 ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 16600461 gccgacgacgtccgcctcgccatccagtccaaggtcaacttctccttctcccagccgccg 16600520 Query: 330 ccccgcgaggt 340 ||||||||||| Sbjct: 16600521 ccccgcgaggt 16600531 Score = 161 bits (81), Expect = 6e-36 Identities = 159/185 (85%) Strand = Plus / Plus Query: 337 aggttctccttgagttggcacgcagccgaaacaaaatcccgctgccgaagtctattgctc 396 |||||||||||||| ||||||| | ||| |||||||||||||| || ||||| ||||||| Sbjct: 16604511 aggttctccttgaggtggcacggaaccggaacaaaatcccgctacccaagtcgattgctc 16604570 Query: 397 cacctggctcgattcctctgccgcctgagcaggacacgctgttgagccaaaactatcaac 456 |||||||||| ||||||||||| || |||||||||||||||||||||||||| || || | Sbjct: 16604571 cacctggctcaattcctctgccaccagagcaggacacgctgttgagccaaaattaccagc 16604630 Query: 457 tcttacccccgttgaagccaccgcttccagatgacgaaccagaagatgacaacgagggag 516 || || | |||||||||||||||| || ||| ||| ||||||||||||| | |||| Sbjct: 16604631 tcctagctccgttgaagccaccgcctcagtttgaagaaacagaagatgacaatgcaggag 16604690 Query: 517 ccaac 521 ||||| Sbjct: 16604691 ccaac 16604695 >gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 genomic sequence, complete sequence Length = 133843 Score = 339 bits (171), Expect = 1e-89 Identities = 231/251 (92%) Strand = Plus / Minus Query: 90 gcggacgagccccgcgacgcgcgggtggtgagggagctcctccggtcgatggggctcggc 149 ||||||||||||||||||||||| |||||| |||||||||| || || |||||||| || Sbjct: 47395 gcggacgagccccgcgacgcgcgcgtggtgcgggagctcctgcgctccatggggctgagc 47336 Query: 150 gagggcgagtacgagccgcgcgtcgtgcaccagttcctggacctggcctaccgctacgtc 209 ||||| |||||||||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 47335 gagggggagtacgagccgcgggtggtgcaccagttcctcgacctggcctaccgctacgtc 47276 Query: 210 ggcgacgtgctcggtgacgcgcaggtctacgccgaccatgcaggcaagacccagctcgac 269 |||||||||||||| ||||| ||||||||||||||||| || || ||| ||||||| ||| Sbjct: 47275 ggcgacgtgctcggggacgcccaggtctacgccgaccacgcggggaagccccagcttgac 47216 Query: 270 gccgacgacgtccgcctcgccatccaggccaaggtcaacttctcattctcccagccgccg 329 ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 47215 gccgacgacgtccgcctcgccatccagtccaaggtcaacttctccttctcccagccgccg 47156 Query: 330 ccccgcgaggt 340 ||||||||||| Sbjct: 47155 ccccgcgaggt 47145 Score = 161 bits (81), Expect = 6e-36 Identities = 159/185 (85%) Strand = Plus / Minus Query: 337 aggttctccttgagttggcacgcagccgaaacaaaatcccgctgccgaagtctattgctc 396 |||||||||||||| ||||||| | ||| |||||||||||||| || ||||| ||||||| Sbjct: 43165 aggttctccttgaggtggcacggaaccggaacaaaatcccgctacccaagtcgattgctc 43106 Query: 397 cacctggctcgattcctctgccgcctgagcaggacacgctgttgagccaaaactatcaac 456 |||||||||| ||||||||||| || |||||||||||||||||||||||||| || || | Sbjct: 43105 cacctggctcaattcctctgccaccagagcaggacacgctgttgagccaaaattaccagc 43046 Query: 457 tcttacccccgttgaagccaccgcttccagatgacgaaccagaagatgacaacgagggag 516 || || | |||||||||||||||| || ||| ||| ||||||||||||| | |||| Sbjct: 43045 tcctagctccgttgaagccaccgcctcagtttgaagaaacagaagatgacaatgcaggag 42986 Query: 517 ccaac 521 ||||| Sbjct: 42985 ccaac 42981 >ref|NM_001056873.1| Oryza sativa (japonica cultivar-group) Os03g0408500 (Os03g0408500) mRNA, complete cds Length = 753 Score = 335 bits (169), Expect = 2e-88 Identities = 229/249 (91%) Strand = Plus / Plus Query: 90 gcggacgagccccgcgacgcgcgggtggtgagggagctcctccggtcgatggggctcggc 149 ||||||||||||||||||||||| |||||| |||||||||| || || |||||||| || Sbjct: 91 gcggacgagccccgcgacgcgcgcgtggtgcgggagctcctgcgctccatggggctgagc 150 Query: 150 gagggcgagtacgagccgcgcgtcgtgcaccagttcctggacctggcctaccgctacgtc 209 ||||| |||||||||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 151 gagggggagtacgagccgcgggtggtgcaccagttcctcgacctggcctaccgctacgtc 210 Query: 210 ggcgacgtgctcggtgacgcgcaggtctacgccgaccatgcaggcaagacccagctcgac 269 |||||||||||||| ||||| ||||||||||||||||| || || ||| ||||||| ||| Sbjct: 211 ggcgacgtgctcggggacgcccaggtctacgccgaccacgcggggaagccccagcttgac 270 Query: 270 gccgacgacgtccgcctcgccatccaggccaaggtcaacttctcattctcccagccgccg 329 ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 271 gccgacgacgtccgcctcgccatccagtccaaggtcaacttctccttctcccagccgccg 330 Query: 330 ccccgcgag 338 ||||||||| Sbjct: 331 ccccgcgag 339 Score = 159 bits (80), Expect = 3e-35 Identities = 158/184 (85%) Strand = Plus / Plus Query: 338 ggttctccttgagttggcacgcagccgaaacaaaatcccgctgccgaagtctattgctcc 397 ||||||||||||| ||||||| | ||| |||||||||||||| || ||||| |||||||| Sbjct: 417 ggttctccttgaggtggcacggaaccggaacaaaatcccgctacccaagtcgattgctcc 476 Query: 398 acctggctcgattcctctgccgcctgagcaggacacgctgttgagccaaaactatcaact 457 ||||||||| ||||||||||| || |||||||||||||||||||||||||| || || || Sbjct: 477 acctggctcaattcctctgccaccagagcaggacacgctgttgagccaaaattaccagct 536 Query: 458 cttacccccgttgaagccaccgcttccagatgacgaaccagaagatgacaacgagggagc 517 | || | |||||||||||||||| || ||| ||| ||||||||||||| | ||||| Sbjct: 537 cctagctccgttgaagccaccgcctcagtttgaagaaacagaagatgacaatgcaggagc 596 Query: 518 caac 521 |||| Sbjct: 597 caac 600 >gb|AY110973.1| Zea mays CL36418_1 mRNA sequence Length = 1132 Score = 210 bits (106), Expect = 8e-51 Identities = 175/198 (88%) Strand = Plus / Plus Query: 278 cgtccgcctcgccatccaggccaaggtcaacttctcattctcccagccgccgccccgcga 337 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || || Sbjct: 476 cgtccgcctcgccatccaggccaaggtcaatttctccttctcccagccgccgccgcgtga 535 Query: 338 ggttctccttgagttggcacgcagccgaaacaaaatcccgctgccgaagtctattgctcc 397 ||||||||||||| |||| ||||||||||||| ||| |||||||| || || |||||||| Sbjct: 536 ggttctccttgagctggcccgcagccgaaacagaatgccgctgcccaaatcaattgctcc 595 Query: 398 acctggctcgattcctctgccgcctgagcaggacacgctgttgagccaaaactatcaact 457 |||||||| ||||| || ||||||||||||||||| |||||| ||| ||||| ||||| Sbjct: 596 tcctggctcaattcccctcccgcctgagcaggacactctgttggcccagaactaccaact 655 Query: 458 cttacccccgttgaagcc 475 | | || ||||||||||| Sbjct: 656 cctgcctccgttgaagcc 673 Score = 157 bits (79), Expect = 1e-34 Identities = 112/123 (91%) Strand = Plus / Plus Query: 125 gctcctccggtcgatggggctcggcgagggcgagtacgagccgcgcgtcgtgcaccagtt 184 |||||| || |||||||| ||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 323 gctcctgcgctcgatgggtctcggtgagggcgagtacgagccccgcgtcgtgcaccagtt 382 Query: 185 cctggacctggcctaccgctacgtcggcgacgtgctcggtgacgcgcaggtctacgccga 244 |||||||||||||||||| |||||||| |||||||| || ||||| || ||||||||||| Sbjct: 383 cctggacctggcctaccgatacgtcggagacgtgctaggggacgcccaagtctacgccga 442 Query: 245 cca 247 ||| Sbjct: 443 cca 445