BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf025i02 (1001 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001071524.1| Oryza sativa (japonica cultivar-group) Os10g... 642 0.0 dbj|AK099827.1| Oryza sativa (japonica cultivar-group) cDNA clon... 642 0.0 gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 gen... 345 2e-91 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 345 2e-91 ref|NM_180852.2| Arabidopsis thaliana thylakoid lumenal 17.4 kDa... 100 2e-17 >ref|NM_001071524.1| Oryza sativa (japonica cultivar-group) Os10g0502000 (Os10g0502000) mRNA, complete cds Length = 1048 Score = 642 bits (324), Expect = 0.0 Identities = 498/556 (89%) Strand = Plus / Plus Query: 272 aaggcggtgggcggcttcgcatgcggcgtgctcgcggcctgggcagtcgcctccacggcc 331 |||||||||||||| | || |||||||| |||||||||||||| ||||| ||| || || Sbjct: 274 aaggcggtgggcgggcttgcgtgcggcgtcctcgcggcctgggccgtcgcgtcctcgtcc 333 Query: 332 aaccctgtgattgccgcgagccagaggttgcctccactctcaacagatccaaacagatgc 391 | ||| ||||||||||| |||||||||||||||||||| || ||||| |||||||||||| Sbjct: 334 agccccgtgattgccgccagccagaggttgcctccactgtccacagagccaaacagatgc 393 Query: 392 gagcgtgcatttgtggggaacacaattggtcaggcaaatggtgtgtatgacaaggcactt 451 |||||||| ||||| |||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 394 gagcgtgcttttgtcgggaacacaattggtcaggcaaatggggtgtatgacaagccactc 453 Query: 452 gatctccggttctgcgattacacaaacgagaaaaccaatctgaaaggcaagtctctatct 511 ||||||||||| ||||||||||||||||||||||| ||||||||||| || |||||| || Sbjct: 454 gatctccggttttgcgattacacaaacgagaaaactaatctgaaaggaaaatctctagct 513 Query: 512 gcggctttgatgtccgattcaaagtttgatggcgctgacatgtcagaagttgtcatgtcc 571 || || |||||||||||||||||||||||||| || |||||||| |||||||| |||||| Sbjct: 514 gcagccttgatgtccgattcaaagtttgatggggccgacatgtctgaagttgtgatgtcc 573 Query: 572 aaagcttatgctgtgggggcaagcttcaaaggaaccgacttcacgaatgcggtgatagac 631 ||||||||||||||||||||||||||||||||||| || ||||| ||||| || |||||| Sbjct: 574 aaagcttatgctgtgggggcaagcttcaaaggaacggatttcacaaatgcagtaatagac 633 Query: 632 cgtgtcaattttgagaaggccgatctccaaggggcaatcttcaagaacaccatcttgtca 691 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 634 cgtgtcaattttgagaaggccgatctccaaggggcaatcttcaggaacaccgtcttgtca 693 Query: 692 ggatcaacctttgatgatgctaagttggaagatgtcgtgtttgaggacacaattattggc 751 ||||||||||| ||||| ||||| || | || ||||||||||||||||| || || ||| Sbjct: 694 ggatcaaccttcgatgacgctaaaatgcaggacgtcgtgtttgaggacacgataatcggc 753 Query: 752 tacattgaccttcagaagctatgcagaaacacctccatcagcgcagaagggagagtagag 811 ||||||||||||||||||||||||| ||||| |||||||||||||| ||| ||||| Sbjct: 754 tacattgaccttcagaagctatgcaccaacacttccatcagcgcagactcaagattagag 813 Query: 812 cttggttgcagatgat 827 || || |||||||||| Sbjct: 814 ctgggctgcagatgat 829 >dbj|AK099827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013103I15, full insert sequence Length = 1050 Score = 642 bits (324), Expect = 0.0 Identities = 498/556 (89%) Strand = Plus / Plus Query: 272 aaggcggtgggcggcttcgcatgcggcgtgctcgcggcctgggcagtcgcctccacggcc 331 |||||||||||||| | || |||||||| |||||||||||||| ||||| ||| || || Sbjct: 275 aaggcggtgggcgggcttgcgtgcggcgtcctcgcggcctgggccgtcgcgtcctcgtcc 334 Query: 332 aaccctgtgattgccgcgagccagaggttgcctccactctcaacagatccaaacagatgc 391 | ||| ||||||||||| |||||||||||||||||||| || ||||| |||||||||||| Sbjct: 335 agccccgtgattgccgccagccagaggttgcctccactgtccacagagccaaacagatgc 394 Query: 392 gagcgtgcatttgtggggaacacaattggtcaggcaaatggtgtgtatgacaaggcactt 451 |||||||| ||||| |||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 395 gagcgtgcttttgtcgggaacacaattggtcaggcaaatggggtgtatgacaagccactc 454 Query: 452 gatctccggttctgcgattacacaaacgagaaaaccaatctgaaaggcaagtctctatct 511 ||||||||||| ||||||||||||||||||||||| ||||||||||| || |||||| || Sbjct: 455 gatctccggttttgcgattacacaaacgagaaaactaatctgaaaggaaaatctctagct 514 Query: 512 gcggctttgatgtccgattcaaagtttgatggcgctgacatgtcagaagttgtcatgtcc 571 || || |||||||||||||||||||||||||| || |||||||| |||||||| |||||| Sbjct: 515 gcagccttgatgtccgattcaaagtttgatggggccgacatgtctgaagttgtgatgtcc 574 Query: 572 aaagcttatgctgtgggggcaagcttcaaaggaaccgacttcacgaatgcggtgatagac 631 ||||||||||||||||||||||||||||||||||| || ||||| ||||| || |||||| Sbjct: 575 aaagcttatgctgtgggggcaagcttcaaaggaacggatttcacaaatgcagtaatagac 634 Query: 632 cgtgtcaattttgagaaggccgatctccaaggggcaatcttcaagaacaccatcttgtca 691 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 635 cgtgtcaattttgagaaggccgatctccaaggggcaatcttcaggaacaccgtcttgtca 694 Query: 692 ggatcaacctttgatgatgctaagttggaagatgtcgtgtttgaggacacaattattggc 751 ||||||||||| ||||| ||||| || | || ||||||||||||||||| || || ||| Sbjct: 695 ggatcaaccttcgatgacgctaaaatgcaggacgtcgtgtttgaggacacgataatcggc 754 Query: 752 tacattgaccttcagaagctatgcagaaacacctccatcagcgcagaagggagagtagag 811 ||||||||||||||||||||||||| ||||| |||||||||||||| ||| ||||| Sbjct: 755 tacattgaccttcagaagctatgcaccaacacttccatcagcgcagactcaagattagag 814 Query: 812 cttggttgcagatgat 827 || || |||||||||| Sbjct: 815 ctgggctgcagatgat 830 >gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete sequence Length = 146664 Score = 345 bits (174), Expect = 2e-91 Identities = 231/250 (92%) Strand = Plus / Minus Query: 354 agaggttgcctccactctcaacagatccaaacagatgcgagcgtgcatttgtggggaaca 413 |||||||||||||||| || ||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 136067 agaggttgcctccactgtccacagagccaaacagatgcgagcgtgcttttgtcgggaaca 136008 Query: 414 caattggtcaggcaaatggtgtgtatgacaaggcacttgatctccggttctgcgattaca 473 ||||||||||||||||||| |||||||||||| |||| ||||||||||| |||||||||| Sbjct: 136007 caattggtcaggcaaatggggtgtatgacaagccactcgatctccggttttgcgattaca 135948 Query: 474 caaacgagaaaaccaatctgaaaggcaagtctctatctgcggctttgatgtccgattcaa 533 ||||||||||||| ||||||||||| || |||||| |||| || |||||||||||||||| Sbjct: 135947 caaacgagaaaactaatctgaaaggaaaatctctagctgcagccttgatgtccgattcaa 135888 Query: 534 agtttgatggcgctgacatgtcagaagttgtcatgtccaaagcttatgctgtgggggcaa 593 |||||||||| || |||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 135887 agtttgatggggccgacatgtctgaagttgtgatgtccaaagcttatgctgtgggggcaa 135828 Query: 594 gcttcaaagg 603 |||||||||| Sbjct: 135827 gcttcaaagg 135818 Score = 236 bits (119), Expect = 1e-58 Identities = 200/227 (88%) Strand = Plus / Minus Query: 601 aggaaccgacttcacgaatgcggtgatagaccgtgtcaattttgagaaggccgatctcca 660 |||||| || ||||| ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 135706 aggaacggatttcacaaatgcagtaatagaccgtgtcaattttgagaaggccgatctcca 135647 Query: 661 aggggcaatcttcaagaacaccatcttgtcaggatcaacctttgatgatgctaagttgga 720 |||||||||||||| ||||||| ||||||||||||||||||| ||||| ||||| || | Sbjct: 135646 aggggcaatcttcaggaacaccgtcttgtcaggatcaaccttcgatgacgctaaaatgca 135587 Query: 721 agatgtcgtgtttgaggacacaattattggctacattgaccttcagaagctatgcagaaa 780 || ||||||||||||||||| || || |||||||||||||||||||||||||||| || Sbjct: 135586 ggacgtcgtgtttgaggacacgataatcggctacattgaccttcagaagctatgcaccaa 135527 Query: 781 cacctccatcagcgcagaagggagagtagagcttggttgcagatgat 827 ||| |||||||||||||| ||| ||||||| || |||||||||| Sbjct: 135526 cacttccatcagcgcagactcaagattagagctgggctgcagatgat 135480 >dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 345 bits (174), Expect = 2e-91 Identities = 231/250 (92%) Strand = Plus / Minus Query: 354 agaggttgcctccactctcaacagatccaaacagatgcgagcgtgcatttgtggggaaca 413 |||||||||||||||| || ||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 18632256 agaggttgcctccactgtccacagagccaaacagatgcgagcgtgcttttgtcgggaaca 18632197 Query: 414 caattggtcaggcaaatggtgtgtatgacaaggcacttgatctccggttctgcgattaca 473 ||||||||||||||||||| |||||||||||| |||| ||||||||||| |||||||||| Sbjct: 18632196 caattggtcaggcaaatggggtgtatgacaagccactcgatctccggttttgcgattaca 18632137 Query: 474 caaacgagaaaaccaatctgaaaggcaagtctctatctgcggctttgatgtccgattcaa 533 ||||||||||||| ||||||||||| || |||||| |||| || |||||||||||||||| Sbjct: 18632136 caaacgagaaaactaatctgaaaggaaaatctctagctgcagccttgatgtccgattcaa 18632077 Query: 534 agtttgatggcgctgacatgtcagaagttgtcatgtccaaagcttatgctgtgggggcaa 593 |||||||||| || |||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 18632076 agtttgatggggccgacatgtctgaagttgtgatgtccaaagcttatgctgtgggggcaa 18632017 Query: 594 gcttcaaagg 603 |||||||||| Sbjct: 18632016 gcttcaaagg 18632007 Score = 236 bits (119), Expect = 1e-58 Identities = 200/227 (88%) Strand = Plus / Minus Query: 601 aggaaccgacttcacgaatgcggtgatagaccgtgtcaattttgagaaggccgatctcca 660 |||||| || ||||| ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 18631895 aggaacggatttcacaaatgcagtaatagaccgtgtcaattttgagaaggccgatctcca 18631836 Query: 661 aggggcaatcttcaagaacaccatcttgtcaggatcaacctttgatgatgctaagttgga 720 |||||||||||||| ||||||| ||||||||||||||||||| ||||| ||||| || | Sbjct: 18631835 aggggcaatcttcaggaacaccgtcttgtcaggatcaaccttcgatgacgctaaaatgca 18631776 Query: 721 agatgtcgtgtttgaggacacaattattggctacattgaccttcagaagctatgcagaaa 780 || ||||||||||||||||| || || |||||||||||||||||||||||||||| || Sbjct: 18631775 ggacgtcgtgtttgaggacacgataatcggctacattgaccttcagaagctatgcaccaa 18631716 Query: 781 cacctccatcagcgcagaagggagagtagagcttggttgcagatgat 827 ||| |||||||||||||| ||| ||||||| || |||||||||| Sbjct: 18631715 cacttccatcagcgcagactcaagattagagctgggctgcagatgat 18631669 >ref|NM_180852.2| Arabidopsis thaliana thylakoid lumenal 17.4 kDa protein, chloroplast (AT5G53490) mRNA, complete cds Length = 913 Score = 99.6 bits (50), Expect = 2e-17 Identities = 167/206 (81%) Strand = Plus / Plus Query: 398 gcatttgtggggaacacaattggtcaggcaaatggtgtgtatgacaaggcacttgatctc 457 |||||||| || ||||| || ||||| ||||||||||| |||||||| |||| ||||| Sbjct: 304 gcatttgttggtaacacgataggtcaagcaaatggtgtctatgacaaaccactggatctt 363 Query: 458 cggttctgcgattacacaaacgagaaaaccaatctgaaaggcaagtctctatctgcggct 517 ||||||| ||||||||||| || |||| ||||| ||||||||| |||| ||||| || Sbjct: 364 aggttctgtgattacacaaatgatcaaactaatctcaaaggcaagactctctctgcagcc 423 Query: 518 ttgatgtccgattcaaagtttgatggcgctgacatgtcagaagttgtcatgtccaaagct 577 |||||| | | ||||||||||| || || ||| | |||||||| ||||| |||||| Sbjct: 424 ttgatggttggggctaagtttgatggtgcagatatgactgaagttgttatgtcaaaagct 483 Query: 578 tatgctgtgggggcaagcttcaaagg 603 |||||||| | |||||||| ||||| Sbjct: 484 tatgctgtagaagcaagctttaaagg 509