BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf025g18 (1204 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060438.1| Oryza sativa (japonica cultivar-group) Os04g... 605 e-169 gb|BT009585.1| Triticum aestivum clone wre1n.pk0046.h1:fis, full... 272 3e-69 emb|CR855160.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 240 1e-59 emb|AJ243961.1| Oryza sativa chromosome 4 BAC l1332 genomic sequ... 240 1e-59 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 232 3e-57 >ref|NM_001060438.1| Oryza sativa (japonica cultivar-group) Os04g0619900 (Os04g0619900) mRNA, complete cds Length = 819 Score = 605 bits (305), Expect = e-169 Identities = 551/633 (87%) Strand = Plus / Plus Query: 353 ccgccgaggccgccgccgccggagatcagggtgcgggtcaagtacggcggcgcgaggcac 412 ||||||||||| |||||||||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 187 ccgccgaggcctccgccgccggagatcaaggtgcgggtcaagtacggcgccgcgcggcac 246 Query: 413 gaggtcgccgtctcctccattgccacgttcggtgagctgaagaagctgcttgcggtgagg 472 |||||||||||||||||||||||| | ||||| ||||||||||||||||| |||| |||| Sbjct: 247 gaggtcgccgtctcctccattgcctccttcggcgagctgaagaagctgctggcggcgagg 306 Query: 473 accgggctgcaaccggcggaccagagtctgacgtacaaaggcagggaacggagcaactcg 532 |||||||||| ||||||||||| | |||||||||| |||| ||| ||| ||||| | Sbjct: 307 accgggctgccggcggcggaccagcggctgacgtacaggggcaaggagcggggcaacgcc 366 Query: 533 gactacctcgatgtctgcggcgtcaagaacaagtccaagctcgtcctggctgaggatccg 592 ||||||||||| ||||||||||||||||||| |||||||||| ||| || ||||| ||| Sbjct: 367 gactacctcgacgtctgcggcgtcaagaacaggtccaagctctacctcgccgaggacccg 426 Query: 593 accagcctggagaggagatacatcgagcggcagaagaacgccaagatcgagagcaccaac 652 |||||| | ||| || | ||||||||||| ||||||| |||||||||||||| | ||||| Sbjct: 427 accagcgtcgagcggcgctacatcgagcgccagaagagcgccaagatcgagaccgccaac 486 Query: 653 cgcgccatcggcgctattgcgttggaggttgacaagctcgccgatcaggtaacaagcata 712 |||||||| ||||| || || |||||||| |||||||||||||||||||||| ||||| Sbjct: 487 cgcgccattggcgccatcgccttggaggtcgacaagctcgccgatcaggtaaggagcatc 546 Query: 713 gagaaatcgatctctggtgggaacaaagtggccgaggtgcagatcacgacgctgatcgag 772 ||||| |||||| | |||||| ||| || |||||||||||||||||||||||||||||| Sbjct: 547 gagaagtcgatcacccgtgggagcaaggtcgccgaggtgcagatcacgacgctgatcgag 606 Query: 773 ctgctgatgcggatggcggtgaagctggagagcatacctgctgaaggggactcatcttcg 832 |||||||||||| | || ||||||||||| ||||||| |||||||||||||| ||||| Sbjct: 607 ctgctgatgcggcttgctgtgaagctggacagcatacacgctgaaggggactcgtcttcc 666 Query: 833 cataagaacattcaggcaaagagggtgcagaaatgcgtggagacgctagacgtgctcaag 892 || |||||||||||||| ||||||||||||||||||||||||||||| || ||||||||| Sbjct: 667 cagaagaacattcaggcgaagagggtgcagaaatgcgtggagacgctggatgtgctcaag 726 Query: 893 atctcgaacgcgcggttgcaagcggtcatcgtcacgacgaaatgggagacgttcgacaca 952 ||||| |||||||||||||| || || || ||||| ||||||||||||||||| | Sbjct: 727 atctccaacgcgcggttgcagaatgtgatagtgacgaccaaatgggagacgttcgatgct 786 Query: 953 ccagccacaacccaatgggaactgttcgactga 985 || || || || || ||||| |||||||||||| Sbjct: 787 cctgcaacgacgcagtgggagctgttcgactga 819 Score = 174 bits (88), Expect = 5e-40 Identities = 135/150 (90%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 173 atggcgtcggtgatgcaccggtcgagctcggacggcgggtcgagcagcgggtggtcggag 232 |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 atggcggcggtgatgcaccggtcgagctcggatggcgggtcgagcagcgggtggtcggag 60 Query: 233 gcggcgggggcgggggcgggggcgggggaggagagggccgggtgggaggtccggccgagc 292 ||||| ||||| | ||| ||| ||||| |||||||||||||||||||| || |||||| Sbjct: 61 gcggc---ggcggcgtcggcggccggggacgagagggccgggtgggaggtgcgcccgagc 117 Query: 293 gggatggtcgtgcaggccagggaggagggc 322 ||||||||||||||||| | ||||||||| Sbjct: 118 gggatggtcgtgcaggcgcgcgaggagggc 147 >gb|BT009585.1| Triticum aestivum clone wre1n.pk0046.h1:fis, full insert mRNA sequence Length = 842 Score = 272 bits (137), Expect = 3e-69 Identities = 335/401 (83%) Strand = Plus / Plus Query: 550 cggcgtcaagaacaagtccaagctcgtcctggctgaggatccgaccagcctggagaggag 609 |||||||||||||||||||||||| || | | ||||||||| | ||||||||| || | Sbjct: 36 cggcgtcaagaacaagtccaagctggtggtctccgaggatccggcgagcctggagcggcg 95 Query: 610 atacatcgagcggcagaagaacgccaagatcgagagcaccaaccgcgccatcggcgctat 669 ||||||||||||||| |||||||| |||| ||| | ||||||||||||||||||| || Sbjct: 96 ctacatcgagcggcagcggaacgccaggatccagaacgccaaccgcgccatcggcgccat 155 Query: 670 tgcgttggaggttgacaagctcgccgatcaggtaacaagcatagagaaatcgatctctgg 729 || | ||| | |||||||||||||||||||| || ||||| ||||| ||| | || || Sbjct: 156 cgccctcgagctcgacaagctcgccgatcaggtgacgagcatcgagaagtcggtgtccgg 215 Query: 730 tgggaacaaagtggccgaggtgcagatcacgacgctgatcgagctgctgatgcggatggc 789 |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 216 cgggagcaaggtggcggaggtgcagatcacgacgctgatcgagctgctgatgcggcacgc 275 Query: 790 ggtgaagctggagagcatacctgctgaaggggactcatcttcgcataagaacattcaggc 849 |||||||||||||||||||||||| || | ||| | || ||||| |||||| | ||||| Sbjct: 276 ggtgaagctggagagcatacctgccgacgccgacacctcctcgcagaagaacctccaggc 335 Query: 850 aaagagggtgcagaaatgcgtggagacgctagacgtgctcaagatctcgaacgcgcggtt 909 ||| |||||||||| ||||||||| |||| |||||||||||| | || ||||||||| | Sbjct: 336 gaagcgggtgcagaagtgcgtggaggcgctggacgtgctcaaggtgtccaacgcgcggct 395 Query: 910 gcaagcggtcatcgtcacgacgaaatgggagacgttcgaca 950 ||| |||| | || || || || |||||||||||||||| Sbjct: 396 gcagacggtggtggtgaccaccaagtgggagacgttcgaca 436 >emb|CR855160.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0714H04, complete sequence Length = 106506 Score = 240 bits (121), Expect = 1e-59 Identities = 223/257 (86%) Strand = Plus / Plus Query: 446 gagctgaagaagctgcttgcggtgaggaccgggctgcaaccggcggaccagagtctgacg 505 ||||||||||||||||| |||| |||||||||||||| ||||||||||| | |||||| Sbjct: 25994 gagctgaagaagctgctggcggcgaggaccgggctgccggcggcggaccagcggctgacg 26053 Query: 506 tacaaaggcagggaacggagcaactcggactacctcgatgtctgcggcgtcaagaacaag 565 |||| |||| ||| ||| ||||| | ||||||||||| ||||||||||||||||||||| Sbjct: 26054 tacaggggcaaggagcggggcaacgccgactacctcgacgtctgcggcgtcaagaacaag 26113 Query: 566 tccaagctcgtcctggctgaggatccgaccagcctggagaggagatacatcgagcggcag 625 ||||||||| ||| || ||||| ||||||||| | ||| || | ||||||||||| ||| Sbjct: 26114 tccaagctctacctcgccgaggacccgaccagcgtcgagcggcgctacatcgagcgccag 26173 Query: 626 aagaacgccaagatcgagagcaccaaccgcgccatcggcgctattgcgttggaggttgac 685 |||| |||||||||||||| | ||||||||||||| ||||| || || |||||||| ||| Sbjct: 26174 aagagcgccaagatcgagaccgccaaccgcgccattggcgccatcgccttggaggtcgac 26233 Query: 686 aagctcgccgatcaggt 702 ||||||||||||||||| Sbjct: 26234 aagctcgccgatcaggt 26250 Score = 180 bits (91), Expect = 9e-42 Identities = 138/153 (90%), Gaps = 3/153 (1%) Strand = Plus / Plus Query: 170 tccatggcgtcggtgatgcaccggtcgagctcggacggcgggtcgagcagcgggtggtcg 229 ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 23662 tccatggcggcggtgatgcaccggtcgagctcggatggcgggtcgagcagcgggtggtcg 23721 Query: 230 gaggcggcgggggcgggggcgggggcgggggaggagagggccgggtgggaggtccggccg 289 |||||||| ||||| | ||| ||| ||||| |||||||||||||||||||| || ||| Sbjct: 23722 gaggcggc---ggcggcgtcggcggccggggacgagagggccgggtgggaggtgcgcccg 23778 Query: 290 agcgggatggtcgtgcaggccagggaggagggc 322 |||||||||||||||||||| | ||||||||| Sbjct: 23779 agcgggatggtcgtgcaggcgcgcgaggagggc 23811 Score = 151 bits (76), Expect = 8e-33 Identities = 91/96 (94%) Strand = Plus / Plus Query: 353 ccgccgaggccgccgccgccggagatcagggtgcgggtcaagtacggcggcgcgaggcac 412 |||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 23851 ccgccgaggccgccgccgccggagatcaaggtgcgggtcaagtacggcgccgcgcggcac 23910 Query: 413 gaggtcgccgtctcctccattgccacgttcggtgag 448 |||||||||||||||||||||||| | ||||||||| Sbjct: 23911 gaggtcgccgtctcctccattgcctccttcggtgag 23946 Score = 149 bits (75), Expect = 3e-32 Identities = 132/151 (87%) Strand = Plus / Plus Query: 698 caggtaacaagcatagagaaatcgatctctggtgggaacaaagtggccgaggtgcagatc 757 ||||||| ||||| ||||| |||||| | |||||| ||| || ||||||||||||||| Sbjct: 26924 caggtaaggagcatcgagaagtcgatcacccgtgggagcaaggtcgccgaggtgcagatc 26983 Query: 758 acgacgctgatcgagctgctgatgcggatggcggtgaagctggagagcatacctgctgaa 817 ||||||||||||||||||||||||||| | || ||||||||||| ||||||| |||||| Sbjct: 26984 acgacgctgatcgagctgctgatgcggcttgctgtgaagctggacagcatacacgctgaa 27043 Query: 818 ggggactcatcttcgcataagaacattcagg 848 |||||||| ||||| || ||||||||||||| Sbjct: 27044 ggggactcgtcttcccagaagaacattcagg 27074 Score = 117 bits (59), Expect = 1e-22 Identities = 122/143 (85%) Strand = Plus / Plus Query: 845 caggcaaagagggtgcagaaatgcgtggagacgctagacgtgctcaagatctcgaacgcg 904 ||||| ||||||||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 28226 caggcgaagagggtgcagaaatgcgtggagacgctggatgtgctcaagatctccaacgcg 28285 Query: 905 cggttgcaagcggtcatcgtcacgacgaaatgggagacgttcgacacaccagccacaacc 964 |||||||| || || || ||||| ||||||||||||||||| | || || || || Sbjct: 28286 cggttgcagaatgtgatagtgacgaccaaatgggagacgttcgatgctcctgcaacgacg 28345 Query: 965 caatgggaactgttcgactgaag 987 || ||||| |||||||||||||| Sbjct: 28346 cagtgggagctgttcgactgaag 28368 >emb|AJ243961.1| Oryza sativa chromosome 4 BAC l1332 genomic sequences Length = 74658 Score = 240 bits (121), Expect = 1e-59 Identities = 223/257 (86%) Strand = Plus / Minus Query: 446 gagctgaagaagctgcttgcggtgaggaccgggctgcaaccggcggaccagagtctgacg 505 ||||||||||||||||| |||| |||||||||||||| ||||||||||| | |||||| Sbjct: 3439 gagctgaagaagctgctggcggcgaggaccgggctgccggcggcggaccagcggctgacg 3380 Query: 506 tacaaaggcagggaacggagcaactcggactacctcgatgtctgcggcgtcaagaacaag 565 |||| |||| ||| ||| ||||| | ||||||||||| ||||||||||||||||||||| Sbjct: 3379 tacaggggcaaggagcggggcaacgccgactacctcgacgtctgcggcgtcaagaacaag 3320 Query: 566 tccaagctcgtcctggctgaggatccgaccagcctggagaggagatacatcgagcggcag 625 ||||||||| ||| || ||||| ||||||||| | ||| || | ||||||||||| ||| Sbjct: 3319 tccaagctctacctcgccgaggacccgaccagcgtcgagcggcgctacatcgagcgccag 3260 Query: 626 aagaacgccaagatcgagagcaccaaccgcgccatcggcgctattgcgttggaggttgac 685 |||| |||||||||||||| | ||||||||||||| ||||| || || |||||||| ||| Sbjct: 3259 aagagcgccaagatcgagaccgccaaccgcgccattggcgccatcgccttggaggtcgac 3200 Query: 686 aagctcgccgatcaggt 702 ||||||||||||||||| Sbjct: 3199 aagctcgccgatcaggt 3183 Score = 180 bits (91), Expect = 9e-42 Identities = 138/153 (90%), Gaps = 3/153 (1%) Strand = Plus / Minus Query: 170 tccatggcgtcggtgatgcaccggtcgagctcggacggcgggtcgagcagcgggtggtcg 229 ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 5772 tccatggcggcggtgatgcaccggtcgagctcggatggcgggtcgagcagcgggtggtcg 5713 Query: 230 gaggcggcgggggcgggggcgggggcgggggaggagagggccgggtgggaggtccggccg 289 |||||||| ||||| | ||| ||| ||||| |||||||||||||||||||| || ||| Sbjct: 5712 gaggcggc---ggcggcgtcggcggccggggacgagagggccgggtgggaggtgcgcccg 5656 Query: 290 agcgggatggtcgtgcaggccagggaggagggc 322 |||||||||||||||||||| | ||||||||| Sbjct: 5655 agcgggatggtcgtgcaggcgcgcgaggagggc 5623 Score = 151 bits (76), Expect = 8e-33 Identities = 91/96 (94%) Strand = Plus / Minus Query: 353 ccgccgaggccgccgccgccggagatcagggtgcgggtcaagtacggcggcgcgaggcac 412 |||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 5583 ccgccgaggccgccgccgccggagatcaaggtgcgggtcaagtacggcgccgcgcggcac 5524 Query: 413 gaggtcgccgtctcctccattgccacgttcggtgag 448 |||||||||||||||||||||||| | ||||||||| Sbjct: 5523 gaggtcgccgtctcctccattgcctccttcggtgag 5488 Score = 149 bits (75), Expect = 3e-32 Identities = 132/151 (87%) Strand = Plus / Minus Query: 698 caggtaacaagcatagagaaatcgatctctggtgggaacaaagtggccgaggtgcagatc 757 ||||||| ||||| ||||| |||||| | |||||| ||| || ||||||||||||||| Sbjct: 2509 caggtaaggagcatcgagaagtcgatcacccgtgggagcaaggtcgccgaggtgcagatc 2450 Query: 758 acgacgctgatcgagctgctgatgcggatggcggtgaagctggagagcatacctgctgaa 817 ||||||||||||||||||||||||||| | || ||||||||||| ||||||| |||||| Sbjct: 2449 acgacgctgatcgagctgctgatgcggcttgctgtgaagctggacagcatacacgctgaa 2390 Query: 818 ggggactcatcttcgcataagaacattcagg 848 |||||||| ||||| || ||||||||||||| Sbjct: 2389 ggggactcgtcttcccagaagaacattcagg 2359 Score = 117 bits (59), Expect = 1e-22 Identities = 122/143 (85%) Strand = Plus / Minus Query: 845 caggcaaagagggtgcagaaatgcgtggagacgctagacgtgctcaagatctcgaacgcg 904 ||||| ||||||||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 1207 caggcgaagagggtgcagaaatgcgtggagacgctggatgtgctcaagatctccaacgcg 1148 Query: 905 cggttgcaagcggtcatcgtcacgacgaaatgggagacgttcgacacaccagccacaacc 964 |||||||| || || || ||||| ||||||||||||||||| | || || || || Sbjct: 1147 cggttgcagaatgtgatagtgacgaccaaatgggagacgttcgatgctcctgcaacgacg 1088 Query: 965 caatgggaactgttcgactgaag 987 || ||||| |||||||||||||| Sbjct: 1087 cagtgggagctgttcgactgaag 1065 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 232 bits (117), Expect = 3e-57 Identities = 222/257 (86%) Strand = Plus / Plus Query: 446 gagctgaagaagctgcttgcggtgaggaccgggctgcaaccggcggaccagagtctgacg 505 ||||||||||||||||| |||| |||||||||||||| ||||||||||| | |||||| Sbjct: 31533743 gagctgaagaagctgctggcggcgaggaccgggctgccggcggcggaccagcggctgacg 31533802 Query: 506 tacaaaggcagggaacggagcaactcggactacctcgatgtctgcggcgtcaagaacaag 565 |||| |||| ||| ||| ||||| | ||||||||||| ||||||||||||||||||| | Sbjct: 31533803 tacaggggcaaggagcggggcaacgccgactacctcgacgtctgcggcgtcaagaacagg 31533862 Query: 566 tccaagctcgtcctggctgaggatccgaccagcctggagaggagatacatcgagcggcag 625 ||||||||| ||| || ||||| ||||||||| | ||| || | ||||||||||| ||| Sbjct: 31533863 tccaagctctacctcgccgaggacccgaccagcgtcgagcggcgctacatcgagcgccag 31533922 Query: 626 aagaacgccaagatcgagagcaccaaccgcgccatcggcgctattgcgttggaggttgac 685 |||| |||||||||||||| | ||||||||||||| ||||| || || |||||||| ||| Sbjct: 31533923 aagagcgccaagatcgagaccgccaaccgcgccattggcgccatcgccttggaggtcgac 31533982 Query: 686 aagctcgccgatcaggt 702 ||||||||||||||||| Sbjct: 31533983 aagctcgccgatcaggt 31533999 Score = 180 bits (91), Expect = 9e-42 Identities = 138/153 (90%), Gaps = 3/153 (1%) Strand = Plus / Plus Query: 170 tccatggcgtcggtgatgcaccggtcgagctcggacggcgggtcgagcagcgggtggtcg 229 ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 31531423 tccatggcggcggtgatgcaccggtcgagctcggatggcgggtcgagcagcgggtggtcg 31531482 Query: 230 gaggcggcgggggcgggggcgggggcgggggaggagagggccgggtgggaggtccggccg 289 |||||||| ||||| | ||| ||| ||||| |||||||||||||||||||| || ||| Sbjct: 31531483 gaggcggc---ggcggcgtcggcggccggggacgagagggccgggtgggaggtgcgcccg 31531539 Query: 290 agcgggatggtcgtgcaggccagggaggagggc 322 |||||||||||||||||||| | ||||||||| Sbjct: 31531540 agcgggatggtcgtgcaggcgcgcgaggagggc 31531572 Score = 149 bits (75), Expect = 3e-32 Identities = 132/151 (87%) Strand = Plus / Plus Query: 698 caggtaacaagcatagagaaatcgatctctggtgggaacaaagtggccgaggtgcagatc 757 ||||||| ||||| ||||| |||||| | |||||| ||| || ||||||||||||||| Sbjct: 31534669 caggtaaggagcatcgagaagtcgatcacccgtgggagcaaggtcgccgaggtgcagatc 31534728 Query: 758 acgacgctgatcgagctgctgatgcggatggcggtgaagctggagagcatacctgctgaa 817 ||||||||||||||||||||||||||| | || ||||||||||| ||||||| |||||| Sbjct: 31534729 acgacgctgatcgagctgctgatgcggcttgctgtgaagctggacagcatacacgctgaa 31534788 Query: 818 ggggactcatcttcgcataagaacattcagg 848 |||||||| ||||| || ||||||||||||| Sbjct: 31534789 ggggactcgtcttcccagaagaacattcagg 31534819 Score = 143 bits (72), Expect = 2e-30 Identities = 90/96 (93%) Strand = Plus / Plus Query: 353 ccgccgaggccgccgccgccggagatcagggtgcgggtcaagtacggcggcgcgaggcac 412 ||||||||||| |||||||||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 31531612 ccgccgaggcctccgccgccggagatcaaggtgcgggtcaagtacggcgccgcgcggcac 31531671 Query: 413 gaggtcgccgtctcctccattgccacgttcggtgag 448 |||||||||||||||||||||||| | ||||||||| Sbjct: 31531672 gaggtcgccgtctcctccattgcctccttcggtgag 31531707 Score = 117 bits (59), Expect = 1e-22 Identities = 122/143 (85%) Strand = Plus / Plus Query: 845 caggcaaagagggtgcagaaatgcgtggagacgctagacgtgctcaagatctcgaacgcg 904 ||||| ||||||||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 31535971 caggcgaagagggtgcagaaatgcgtggagacgctggatgtgctcaagatctccaacgcg 31536030 Query: 905 cggttgcaagcggtcatcgtcacgacgaaatgggagacgttcgacacaccagccacaacc 964 |||||||| || || || ||||| ||||||||||||||||| | || || || || Sbjct: 31536031 cggttgcagaatgtgatagtgacgaccaaatgggagacgttcgatgctcctgcaacgacg 31536090 Query: 965 caatgggaactgttcgactgaag 987 || ||||| |||||||||||||| Sbjct: 31536091 cagtgggagctgttcgactgaag 31536113