BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf024i13 (1001 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001057121.1| Oryza sativa (japonica cultivar-group) Os03g... 1168 0.0 dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clon... 1160 0.0 gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding prot... 1160 0.0 emb|CT829716.1| Oryza sativa (indica cultivar-group) cDNA clone:... 1152 0.0 dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRN... 1134 0.0 >ref|NM_001057121.1| Oryza sativa (japonica cultivar-group) Os03g0592500 (Os03g0592500) mRNA, complete cds Length = 1105 Score = 1168 bits (589), Expect = 0.0 Identities = 742/793 (93%) Strand = Plus / Plus Query: 60 atggccgcgtcggcgctgcaccagaccaccagcttcctcggcgctgccccccgccgggat 119 |||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| Sbjct: 51 atggccgcgtcggcgctgcaccagaccaccagcttcctcggcaccgcccctcgccgggat 110 Query: 120 gagctcgtgcgccgcgtcggcgacttcggcggccgcatcaccatgcgccgcaccgtcaag 179 |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 111 gagctcgtccgccgcgtcggcgactccggtggccgcatcaccatgcgccgcaccgtcaag 170 Query: 180 agcgccccccagagcatctggtacggccctgaccgtcccaagtacctcggcccgttctcg 239 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 171 agcgcgccccagagcatctggtatggacctgaccgtcccaagtacctgggcccgttctcg 230 Query: 240 gagcagacgccgtcgtacctgaccggcgagttcgccggcgactacgggtgggacacggcg 299 ||||||||||| |||||||||||||| |||||| | || ||||||||||||||||||||| Sbjct: 231 gagcagacgccatcgtacctgaccggagagttcccgggagactacgggtgggacacggcg 290 Query: 300 gggctatcggccgacccggaaaccttcgcgcggaaccgggagctggaggtgatccactcg 359 |||||||||||||||||||| || |||||| ||||| ||||||||||||||||||||||| Sbjct: 291 gggctatcggccgacccggagacgttcgcgaggaacagggagctggaggtgatccactcg 350 Query: 360 cggtgggcgatgctcggcgcgctggggtgcgtgtttccggagatcctgtccaagaacggc 419 |||||||||||||| || |||||||| ||||| || ||||||||||||||||||||||| Sbjct: 351 cggtgggcgatgctgggggcgctgggctgcgtcttcccggagatcctgtccaagaacggg 410 Query: 420 gtgaagttcggcgaggcggtgtggttcaaggccggcgcgcagatcttctccgagggcggg 479 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 411 gtgaagttcggggaggcggtgtggttcaaggccggcgcgcagatcttctccgaggggggg 470 Query: 480 ctggactacctgggcaaccccaacctggtacacgcgcagagcatccttgccatctgggcg 539 || ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 471 ctcgactacctggggaaccccaacctggtgcacgcgcagagcatcctcgccatctgggcg 530 Query: 540 agccaggtcgtgctcatgggcttcgtcgagggctaccgcgtcggcggcggcccgctcggg 599 |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 531 gtccaggtggtgctcatgggattcgtcgagggctaccgcgtcggcggcggcccgctcggc 590 Query: 600 gaggggctcgacaaggtctaccccggcggcgccttcgacccgctcggcctcgccgacgac 659 ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 591 gagggcctcgacaaggtgtacccaggcggcgccttcgacccgctcggcctcgccgacgac 650 Query: 660 ccggacaccttcgccgagctcaaggtcaaggagctcaagaacggccgcctcgctatgttc 719 || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 651 cctgacaccttcgccgagctcaaggtgaaggagctcaagaacggccgcctcgccatgttc 710 Query: 720 tccatgttcggattcttcgtgcaggccatcgtcaccggcaagggccccatcgagaacctc 779 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 711 tccatgttcggcttcttcgtccaggccatcgtcaccggcaagggccccatcgagaacctc 770 Query: 780 tttgaccacgtcgccgaccccgtcaacaacaacgcatgggcctacgccaccaacttcgtc 839 || ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| Sbjct: 771 ttcgaccacgtcgccgaccccgtcgccaacaacgcctgggcatacgccaccaacttcgtc 830 Query: 840 ccagggaagtgag 852 || || ||||||| Sbjct: 831 cccggcaagtgag 843 >dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 1160 bits (585), Expect = 0.0 Identities = 741/793 (93%) Strand = Plus / Plus Query: 60 atggccgcgtcggcgctgcaccagaccaccagcttcctcggcgctgccccccgccgggat 119 |||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| Sbjct: 52 atggccgcgtcggcgctgcaccagaccaccagcttcctcggcaccgcccctcgccgggat 111 Query: 120 gagctcgtgcgccgcgtcggcgacttcggcggccgcatcaccatgcgccgcaccgtcaag 179 |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 112 gagctcgtccgccgcgtcggcgactccggtggccgcatcaccatgcgccgcaccgtcaag 171 Query: 180 agcgccccccagagcatctggtacggccctgaccgtcccaagtacctcggcccgttctcg 239 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 172 agcgcgccccagagcatctggtatggacctgaccgtcccaagtacctgggcccgttctcg 231 Query: 240 gagcagacgccgtcgtacctgaccggcgagttcgccggcgactacgggtgggacacggcg 299 ||||||||||| |||||||||||||| |||||| | || |||||| |||||||||||||| Sbjct: 232 gagcagacgccatcgtacctgaccggagagttcccgggagactacaggtgggacacggcg 291 Query: 300 gggctatcggccgacccggaaaccttcgcgcggaaccgggagctggaggtgatccactcg 359 |||||||||||||||||||| || |||||| ||||| ||||||||||||||||||||||| Sbjct: 292 gggctatcggccgacccggagacgttcgcgaggaacagggagctggaggtgatccactcg 351 Query: 360 cggtgggcgatgctcggcgcgctggggtgcgtgtttccggagatcctgtccaagaacggc 419 |||||||||||||| || |||||||| ||||| || ||||||||||||||||||||||| Sbjct: 352 cggtgggcgatgctgggggcgctgggctgcgtcttcccggagatcctgtccaagaacggg 411 Query: 420 gtgaagttcggcgaggcggtgtggttcaaggccggcgcgcagatcttctccgagggcggg 479 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 412 gtgaagttcggggaggcggtgtggttcaaggccggcgcgcagatcttctccgaggggggg 471 Query: 480 ctggactacctgggcaaccccaacctggtacacgcgcagagcatccttgccatctgggcg 539 || ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 472 ctcgactacctggggaaccccaacctggtgcacgcgcagagcatcctcgccatctgggcg 531 Query: 540 agccaggtcgtgctcatgggcttcgtcgagggctaccgcgtcggcggcggcccgctcggg 599 |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 532 gtccaggtggtgctcatgggattcgtcgagggctaccgcgtcggcggcggcccgctcggc 591 Query: 600 gaggggctcgacaaggtctaccccggcggcgccttcgacccgctcggcctcgccgacgac 659 ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 592 gagggcctcgacaaggtgtacccaggcggcgccttcgacccgctcggcctcgccgacgac 651 Query: 660 ccggacaccttcgccgagctcaaggtcaaggagctcaagaacggccgcctcgctatgttc 719 || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 652 cctgacaccttcgccgagctcaaggtgaaggagctcaagaacggccgcctcgccatgttc 711 Query: 720 tccatgttcggattcttcgtgcaggccatcgtcaccggcaagggccccatcgagaacctc 779 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 712 tccatgttcggcttcttcgtccaggccatcgtcaccggcaagggccccatcgagaacctc 771 Query: 780 tttgaccacgtcgccgaccccgtcaacaacaacgcatgggcctacgccaccaacttcgtc 839 || ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| Sbjct: 772 ttcgaccacgtcgccgaccccgtcgccaacaacgcctgggcatacgccaccaacttcgtc 831 Query: 840 ccagggaagtgag 852 || || ||||||| Sbjct: 832 cccggcaagtgag 844 >gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 1160 bits (585), Expect = 0.0 Identities = 741/793 (93%) Strand = Plus / Plus Query: 60 atggccgcgtcggcgctgcaccagaccaccagcttcctcggcgctgccccccgccgggat 119 |||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| Sbjct: 41 atggccgcgtcggcgctgcaccagaccaccagcttcctcggcaccgcccctcgccgggat 100 Query: 120 gagctcgtgcgccgcgtcggcgacttcggcggccgcatcaccatgcgccgcaccgtcaag 179 |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 101 gagctcgtccgccgcgtcggcgactccggtggccgcatcaccatgcgccgcaccgtcaag 160 Query: 180 agcgccccccagagcatctggtacggccctgaccgtcccaagtacctcggcccgttctcg 239 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 161 agcgcgccccagagcatctggtatggacctgaccgtcccaagtacctgggcccgttctcg 220 Query: 240 gagcagacgccgtcgtacctgaccggcgagttcgccggcgactacgggtgggacacggcg 299 ||||||||||| |||||||||||||| |||||| | || ||||||||||||||||||||| Sbjct: 221 gagcagacgccatcgtacctgaccggagagttcccgggagactacgggtgggacacggcg 280 Query: 300 gggctatcggccgacccggaaaccttcgcgcggaaccgggagctggaggtgatccactcg 359 |||||||||||||||||||| || |||||| ||||| ||||||||||||||||||||||| Sbjct: 281 gggctatcggccgacccggagacgttcgcgaggaacagggagctggaggtgatccactcg 340 Query: 360 cggtgggcgatgctcggcgcgctggggtgcgtgtttccggagatcctgtccaagaacggc 419 |||||||||||||| || |||||||| ||||| || ||||||||||||||||||||||| Sbjct: 341 cggtgggcgatgctgggggcgctgggctgcgtcttcccggagatcctgtccaagaacggg 400 Query: 420 gtgaagttcggcgaggcggtgtggttcaaggccggcgcgcagatcttctccgagggcggg 479 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 401 gtgaagttcggggaggcggtgtggttcaaggccggcgcgcagatcttctccgaggggggg 460 Query: 480 ctggactacctgggcaaccccaacctggtacacgcgcagagcatccttgccatctgggcg 539 || ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 461 ctcgactacctggggaaccccaacctggtgcacgcgcagagcatcctcgccatctgggcg 520 Query: 540 agccaggtcgtgctcatgggcttcgtcgagggctaccgcgtcggcggcggcccgctcggg 599 |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 521 gtccaggtggtgctcatgggattcgtcgagggctaccgcgtcggcggcggcccgctcggc 580 Query: 600 gaggggctcgacaaggtctaccccggcggcgccttcgacccgctcggcctcgccgacgac 659 ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 581 gagggcctcgacaaggtgtacccaagcggcgccttcgacccgctcggcctcgccgacgac 640 Query: 660 ccggacaccttcgccgagctcaaggtcaaggagctcaagaacggccgcctcgctatgttc 719 || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 641 cctgacaccttcgccgagctcaaggtgaaggagctcaagaacggccgcctcgccatgttc 700 Query: 720 tccatgttcggattcttcgtgcaggccatcgtcaccggcaagggccccatcgagaacctc 779 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 701 tccatgttcggcttcttcgtccaggccatcgtcaccggcaagggccccatcgagaacctc 760 Query: 780 tttgaccacgtcgccgaccccgtcaacaacaacgcatgggcctacgccaccaacttcgtc 839 || ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| Sbjct: 761 ttcgaccacgtcgccgaccccgtcgccaacaacgcctgggcatacgccaccaacttcgtc 820 Query: 840 ccagggaagtgag 852 || || ||||||| Sbjct: 821 cccggcaagtgag 833 >emb|CT829716.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA055A12, full insert sequence Length = 1049 Score = 1152 bits (581), Expect = 0.0 Identities = 740/793 (93%) Strand = Plus / Plus Query: 60 atggccgcgtcggcgctgcaccagaccaccagcttcctcggcgctgccccccgccgggat 119 |||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| Sbjct: 54 atggccgcgtcggcgctgcaccagaccaccagcttcctcggcaccgcccctcgccgggat 113 Query: 120 gagctcgtgcgccgcgtcggcgacttcggcggccgcatcaccatgcgccgcaccgtcaag 179 |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 114 gagctcgtccgccgcgtcggcgactccggtggccgcatcaccatgcgccgcaccgtcaag 173 Query: 180 agcgccccccagagcatctggtacggccctgaccgtcccaagtacctcggcccgttctcg 239 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 174 agcgcgccccagagcatctggtatggacctgaccgtcccaagtacctgggcccgttctcg 233 Query: 240 gagcagacgccgtcgtacctgaccggcgagttcgccggcgactacgggtgggacacggcg 299 ||||||||||| |||||||||||||| |||||| | || ||||||||||||||||||||| Sbjct: 234 gagcagacgccatcgtacctgaccggagagttcccgggagactacgggtgggacacggcg 293 Query: 300 gggctatcggccgacccggaaaccttcgcgcggaaccgggagctggaggtgatccactcg 359 |||||||||||||||||||| || |||||| ||||| ||||||||||||||||||||||| Sbjct: 294 gggctatcggccgacccggagacgttcgcgaggaacagggagctggaggtgatccactcg 353 Query: 360 cggtgggcgatgctcggcgcgctggggtgcgtgtttccggagatcctgtccaagaacggc 419 |||||||||||||| || |||||||| ||||| || ||||||||||||||||||||||| Sbjct: 354 cggtgggcgatgctgggggcgctgggctgcgtcttcccggagatcctgtccaagaacggg 413 Query: 420 gtgaagttcggcgaggcggtgtggttcaaggccggcgcgcagatcttctccgagggcggg 479 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 414 gtgaagttcggggaggcggtgtggttcaaggccggcgcgcagatcttctccgaggggggg 473 Query: 480 ctggactacctgggcaaccccaacctggtacacgcgcagagcatccttgccatctgggcg 539 || ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 474 ctcgactacctggggaaccccaacctggtgcacgcgcagagcatcctcgccatctgggcg 533 Query: 540 agccaggtcgtgctcatgggcttcgtcgagggctaccgcgtcggcggcggcccgctcggg 599 |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 534 gtccaggtggtgctcatgggattcgtcgagggctaccgcgtcggcggcggcccgctcggc 593 Query: 600 gaggggctcgacaaggtctaccccggcggcgccttcgacccgctcggcctcgccgacgac 659 ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||||||||| Sbjct: 594 gagggcctcgacaaggtgtacccaggtggcgccttcgacccactcggcctcgccgacgac 653 Query: 660 ccggacaccttcgccgagctcaaggtcaaggagctcaagaacggccgcctcgctatgttc 719 || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 654 cctgacaccttcgccgagctcaaggtgaaggagctcaagaacggccgcctcgccatgttc 713 Query: 720 tccatgttcggattcttcgtgcaggccatcgtcaccggcaagggccccatcgagaacctc 779 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 714 tccatgttcggcttcttcgtccaggccatcgtcaccggcaagggccccatcgagaacctc 773 Query: 780 tttgaccacgtcgccgaccccgtcaacaacaacgcatgggcctacgccaccaacttcgtc 839 || ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| Sbjct: 774 ttcgaccacgtcgccgaccccgtcgccaacaacgcctgggcatacgccaccaacttcgtc 833 Query: 840 ccagggaagtgag 852 || || ||||||| Sbjct: 834 cccggcaagtgag 846 >dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 1134 bits (572), Expect = 0.0 Identities = 737/792 (93%) Strand = Plus / Plus Query: 60 atggccgcgtcggcgctgcaccagaccaccagcttcctcggcgctgccccccgccgggat 119 |||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| Sbjct: 33 atggccgcgtcggcgctgcaccagaccaccagcttcctcggcaccgcccctcgccgggat 92 Query: 120 gagctcgtgcgccgcgtcggcgacttcggcggccgcatcaccatgcgccgcaccgtcaag 179 || |||| |||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 93 gacgtcgtccgccgcgtcggcgactccggtggccgcatcaccatgcgccgcaccgtcaag 152 Query: 180 agcgccccccagagcatctggtacggccctgaccgtcccaagtacctcggcccgttctcg 239 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 153 agcgcgccccagagcatctggtatggacctgaccgtcccaagtacctgggcccgttctcg 212 Query: 240 gagcagacgccgtcgtacctgaccggcgagttcgccggcgactacgggtgggacacggcg 299 ||||||||||| |||||||||||||| |||||| | || ||||||||||||||||||||| Sbjct: 213 gagcagacgccatcgtacctgaccggagagttcccgggagactacgggtgggacacggcg 272 Query: 300 gggctatcggccgacccggaaaccttcgcgcggaaccgggagctggaggtgatccactcg 359 |||||||||||||||||||| || |||||| ||||| ||||||||||| ||||||||||| Sbjct: 273 gggctatcggccgacccggagacgttcgcgaggaacagggagctggagttgatccactcg 332 Query: 360 cggtgggcgatgctcggcgcgctggggtgcgtgtttccggagatcctgtccaagaacggc 419 |||||||||||||| || |||||||| ||||| || ||||||||||||||||||||||| Sbjct: 333 cggtgggcgatgctgggggcgctgggctgcgtcttcccggagatcctgtccaagaacggg 392 Query: 420 gtgaagttcggcgaggcggtgtggttcaaggccggcgcgcagatcttctccgagggcggg 479 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 393 gtgaagttcggggaggcggtgtggttcaaggccggcgcgcagatcttctccgaggggggg 452 Query: 480 ctggactacctgggcaaccccaacctggtacacgcgcagagcatccttgccatctgggcg 539 || ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 453 ctcgactacctggggaaccccaacctggtgcacgcgcagagcatcctcgccatctgggcg 512 Query: 540 agccaggtcgtgctcatgggcttcgtcgagggctaccgcgtcggcggcggcccgctcggg 599 |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 513 gtccaggtggtgctcatgggattcgtcgagggctaccgcgtcggcggcggcccgctcggc 572 Query: 600 gaggggctcgacaaggtctaccccggcggcgccttcgacccgctcggcctcgccgacgac 659 ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 573 gagggcctcgacaaggtgtacccaggcggcgccttcgacccgctcggcctcgccgacgac 632 Query: 660 ccggacaccttcgccgagctcaaggtcaaggagctcaagaacggccgcctcgctatgttc 719 || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 633 cctgacaccttcgccgagctcaaggtgaaggagctcaagaacggccgcctcgccatgttc 692 Query: 720 tccatgttcggattcttcgtgcaggccatcgtcaccggcaagggccccatcgagaacctc 779 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 693 tccatgttcggattcttcgtccaggccatcgtcaccggcaagggccccatcgagaacctc 752 Query: 780 tttgaccacgtcgccgaccccgtcaacaacaacgcatgggcctacgccaccaacttcgtc 839 || ||||||||| ||||||||||| ||||||||| ||| | |||||||||||||||||| Sbjct: 753 ttcgaccacgtcaccgaccccgtcgccaacaacgcctggtcatacgccaccaacttcgtc 812 Query: 840 ccagggaagtga 851 || || |||||| Sbjct: 813 cccggcaagtga 824