BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf024d02 (1023 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001058247.1| Oryza sativa (japonica cultivar-group) Os03g... 283 7e-73 dbj|AK070263.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 7e-73 gb|AY109475.1| Zea mays CL21246_1 mRNA sequence 192 2e-45 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 178 3e-41 gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 178 3e-41 >ref|NM_001058247.1| Oryza sativa (japonica cultivar-group) Os03g0819400 (Os03g0819400) mRNA, complete cds Length = 1073 Score = 283 bits (143), Expect = 7e-73 Identities = 221/247 (89%) Strand = Plus / Plus Query: 356 tgatgtgaagaacacgcagccgcaggagcaggtagttgtactgaaggtctccctgcattg 415 ||||||||||||||| | | ||||||||||||| |||||||||||||| || ||||| || Sbjct: 458 tgatgtgaagaacactctgacgcaggagcaggtggttgtactgaaggtatcactgcactg 517 Query: 416 caaagcatgcgaagggaaagtgaagaagcacctctccaagatggcaggcgtgacatcgtt 475 |||||| |||| || |||||||||||||||||| ||||||||| ||| |||||||| || Sbjct: 518 caaagcgtgcgcgggcaaagtgaagaagcacctcgccaagatggaaggagtgacatcttt 577 Query: 476 cagcatagacttcgcggcgaagaaggtgacggtggtcggcgacgtgacgccgctcggcgt 535 || ||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 578 caacatagacttcgcggcgaagaaggtgacggtggtcggcgacgtgacgccgctgggggt 637 Query: 536 cctcaatagcgtgtccaaggtgaagaacgcccagttctgggcgtcgcagccggccatcgc 595 || || |||||||||||||||||||||||||||||||||||| ||| |||||| || || Sbjct: 638 gctgaacagcgtgtccaaggtgaagaacgcccagttctgggcggcgccgccggcgatagc 697 Query: 596 tgcctga 602 |||||| Sbjct: 698 cgcctga 704 Score = 131 bits (66), Expect = 6e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 32 catggctcctttgctcttcaaggacatgaaaagcctttcgtgctcatctccggcgtccac 91 |||||| |||||||| |||||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 92 catggcgcctttgctgttcaaggacatgaagagcctctcgtgctcgtcgccggcgtccac 151 Query: 92 cgcgatatgtccaagcttagagcggcagccgatggtccggtcacacaagg 141 |||||||| || ||||| ||||||||||||||||||||| ||||||||| Sbjct: 152 ggcgatatgcccgagcttggagcggcagccgatggtccggccacacaagg 201 Score = 117 bits (59), Expect = 9e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 234 gagctcgttagcccggccggctcgtccaggtacctgctgagcggccgtgccgccgccgcc 293 |||||||| ||||| |||||||| |||||||||||||| ||| |||| |||||||||||| Sbjct: 321 gagctcgtcagccccgccggctcatccaggtacctgctcagcagccgcgccgccgccgcc 380 Query: 294 gaggagatccaggaggtggaggc 316 ||||||||||||||||||||||| Sbjct: 381 gaggagatccaggaggtggaggc 403 >dbj|AK070263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043H06, full insert sequence Length = 1074 Score = 283 bits (143), Expect = 7e-73 Identities = 221/247 (89%) Strand = Plus / Plus Query: 356 tgatgtgaagaacacgcagccgcaggagcaggtagttgtactgaaggtctccctgcattg 415 ||||||||||||||| | | ||||||||||||| |||||||||||||| || ||||| || Sbjct: 459 tgatgtgaagaacactctgacgcaggagcaggtggttgtactgaaggtatcactgcactg 518 Query: 416 caaagcatgcgaagggaaagtgaagaagcacctctccaagatggcaggcgtgacatcgtt 475 |||||| |||| || |||||||||||||||||| ||||||||| ||| |||||||| || Sbjct: 519 caaagcgtgcgcgggcaaagtgaagaagcacctcgccaagatggaaggagtgacatcttt 578 Query: 476 cagcatagacttcgcggcgaagaaggtgacggtggtcggcgacgtgacgccgctcggcgt 535 || ||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 579 caacatagacttcgcggcgaagaaggtgacggtggtcggcgacgtgacgccgctgggggt 638 Query: 536 cctcaatagcgtgtccaaggtgaagaacgcccagttctgggcgtcgcagccggccatcgc 595 || || |||||||||||||||||||||||||||||||||||| ||| |||||| || || Sbjct: 639 gctgaacagcgtgtccaaggtgaagaacgcccagttctgggcggcgccgccggcgatagc 698 Query: 596 tgcctga 602 |||||| Sbjct: 699 cgcctga 705 Score = 131 bits (66), Expect = 6e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 32 catggctcctttgctcttcaaggacatgaaaagcctttcgtgctcatctccggcgtccac 91 |||||| |||||||| |||||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 93 catggcgcctttgctgttcaaggacatgaagagcctctcgtgctcgtcgccggcgtccac 152 Query: 92 cgcgatatgtccaagcttagagcggcagccgatggtccggtcacacaagg 141 |||||||| || ||||| ||||||||||||||||||||| ||||||||| Sbjct: 153 ggcgatatgcccgagcttggagcggcagccgatggtccggccacacaagg 202 Score = 117 bits (59), Expect = 9e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 234 gagctcgttagcccggccggctcgtccaggtacctgctgagcggccgtgccgccgccgcc 293 |||||||| ||||| |||||||| |||||||||||||| ||| |||| |||||||||||| Sbjct: 322 gagctcgtcagccccgccggctcatccaggtacctgctcagcagccgcgccgccgccgcc 381 Query: 294 gaggagatccaggaggtggaggc 316 ||||||||||||||||||||||| Sbjct: 382 gaggagatccaggaggtggaggc 404 >gb|AY109475.1| Zea mays CL21246_1 mRNA sequence Length = 1127 Score = 192 bits (97), Expect = 2e-45 Identities = 165/185 (89%), Gaps = 2/185 (1%) Strand = Plus / Minus Query: 384 caggtagttgtactgaaggtctccctgcattgcaaagcatgcgaagggaaagtgaagaag 443 ||||| ||||| || ||||| |||||||| ||||||||||||| ||||| ||||||||| Sbjct: 700 caggtggttgtgctcaaggtatccctgcactgcaaagcatgcgccgggaa-gtgaagaag 642 Query: 444 cacctctccaag-atggcaggcgtgacatcgttcagcatagacttcgcggcgaagaaggt 502 |||||||||||| |||| || |||||| ||||||| ||| |||||||||||||||||||| Sbjct: 641 cacctctccaagcatggaagccgtgacgtcgttcaacatcgacttcgcggcgaagaaggt 582 Query: 503 gacggtggtcggcgacgtgacgccgctcggcgtcctcaatagcgtgtccaaggtgaagaa 562 ||||||||||||||||| |||||||| ||||| |||| |||||||||||||||||||| Sbjct: 581 cacggtggtcggcgacgtcacgccgctgggcgtgctcagcagcgtgtccaaggtgaagaa 522 Query: 563 cgccc 567 ||||| Sbjct: 521 cgccc 517 Score = 107 bits (54), Expect = 9e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 31 ccatggctcctttgctcttcaaggacatgaaaagcctttcgtgctcatctccggcgtcca 90 ||||||||||| |||| |||| ||||||||| | || |||||||| || |||||||||| Sbjct: 1116 ccatggctcctctgctgttcagggacatgaaggggctgtcgtgctcgtccccggcgtcca 1057 Query: 91 ccgcgatatgtccaagcttagagcggcagccgatggtccggtcacacaaggccattgc 148 | |||||||| || ||| | ||||||||||||||||||||| ||||||| |||||||| Sbjct: 1056 cggcgatatgcccgagcctggagcggcagccgatggtccggccacacaaagccattgc 999 Score = 97.6 bits (49), Expect = 9e-17 Identities = 88/101 (87%) Strand = Plus / Minus Query: 237 ctcgttagcccggccggctcgtccaggtacctgctgagcggccgtgccgccgccgccgag 296 ||||| |||||||| ||||||||| | ||| ||||||||||||| ||||||| ||||| Sbjct: 874 ctcgtcagcccggctggctcgtcccgctacttgctgagcggccgcttcgccgccaccgag 815 Query: 297 gagatccaggaggtggaggccgccccggccgttgatgtcaa 337 |||||||||||||||||| | ||||||||||| || ||||| Sbjct: 814 gagatccaggaggtggagtctgccccggccgtcgacgtcaa 774 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 178 bits (90), Expect = 3e-41 Identities = 126/138 (91%) Strand = Plus / Minus Query: 465 gtgacatcgttcagcatagacttcgcggcgaagaaggtgacggtggtcggcgacgtgacg 524 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34173307 gtgacatctttcaacatagacttcgcggcgaagaaggtgacggtggtcggcgacgtgacg 34173248 Query: 525 ccgctcggcgtcctcaatagcgtgtccaaggtgaagaacgcccagttctgggcgtcgcag 584 ||||| || || || || |||||||||||||||||||||||||||||||||||| ||| | Sbjct: 34173247 ccgctgggggtgctgaacagcgtgtccaaggtgaagaacgcccagttctgggcggcgccg 34173188 Query: 585 ccggccatcgctgcctga 602 ||||| || || |||||| Sbjct: 34173187 ccggcgatagccgcctga 34173170 Score = 131 bits (66), Expect = 6e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 32 catggctcctttgctcttcaaggacatgaaaagcctttcgtgctcatctccggcgtccac 91 |||||| |||||||| |||||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 34174669 catggcgcctttgctgttcaaggacatgaagagcctctcgtgctcgtcgccggcgtccac 34174610 Query: 92 cgcgatatgtccaagcttagagcggcagccgatggtccggtcacacaagg 141 |||||||| || ||||| ||||||||||||||||||||| ||||||||| Sbjct: 34174609 ggcgatatgcccgagcttggagcggcagccgatggtccggccacacaagg 34174560 Score = 117 bits (59), Expect = 9e-23 Identities = 77/83 (92%) Strand = Plus / Minus Query: 234 gagctcgttagcccggccggctcgtccaggtacctgctgagcggccgtgccgccgccgcc 293 |||||||| ||||| |||||||| |||||||||||||| ||| |||| |||||||||||| Sbjct: 34174440 gagctcgtcagccccgccggctcatccaggtacctgctcagcagccgcgccgccgccgcc 34174381 Query: 294 gaggagatccaggaggtggaggc 316 ||||||||||||||||||||||| Sbjct: 34174380 gaggagatccaggaggtggaggc 34174358 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Minus Query: 384 caggtagttgtactgaaggtctccctgcattgcaaagcatgcgaagggaaagtgaagaag 443 ||||| |||||||||||||| || ||||| |||||||| |||| || |||||||||||| Sbjct: 34173711 caggtggttgtactgaaggtatcactgcactgcaaagcgtgcgcgggcaaagtgaagaag 34173652 Query: 444 cacctctccaagatgg 459 |||||| ||||||||| Sbjct: 34173651 cacctcgccaagatgg 34173636 >gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 178 bits (90), Expect = 3e-41 Identities = 126/138 (91%) Strand = Plus / Minus Query: 465 gtgacatcgttcagcatagacttcgcggcgaagaaggtgacggtggtcggcgacgtgacg 524 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46647 gtgacatctttcaacatagacttcgcggcgaagaaggtgacggtggtcggcgacgtgacg 46588 Query: 525 ccgctcggcgtcctcaatagcgtgtccaaggtgaagaacgcccagttctgggcgtcgcag 584 ||||| || || || || |||||||||||||||||||||||||||||||||||| ||| | Sbjct: 46587 ccgctgggggtgctgaacagcgtgtccaaggtgaagaacgcccagttctgggcggcgccg 46528 Query: 585 ccggccatcgctgcctga 602 ||||| || || |||||| Sbjct: 46527 ccggcgatagccgcctga 46510 Score = 131 bits (66), Expect = 6e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 32 catggctcctttgctcttcaaggacatgaaaagcctttcgtgctcatctccggcgtccac 91 |||||| |||||||| |||||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 48009 catggcgcctttgctgttcaaggacatgaagagcctctcgtgctcgtcgccggcgtccac 47950 Query: 92 cgcgatatgtccaagcttagagcggcagccgatggtccggtcacacaagg 141 |||||||| || ||||| ||||||||||||||||||||| ||||||||| Sbjct: 47949 ggcgatatgcccgagcttggagcggcagccgatggtccggccacacaagg 47900 Score = 117 bits (59), Expect = 9e-23 Identities = 77/83 (92%) Strand = Plus / Minus Query: 234 gagctcgttagcccggccggctcgtccaggtacctgctgagcggccgtgccgccgccgcc 293 |||||||| ||||| |||||||| |||||||||||||| ||| |||| |||||||||||| Sbjct: 47780 gagctcgtcagccccgccggctcatccaggtacctgctcagcagccgcgccgccgccgcc 47721 Query: 294 gaggagatccaggaggtggaggc 316 ||||||||||||||||||||||| Sbjct: 47720 gaggagatccaggaggtggaggc 47698 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Minus Query: 384 caggtagttgtactgaaggtctccctgcattgcaaagcatgcgaagggaaagtgaagaag 443 ||||| |||||||||||||| || ||||| |||||||| |||| || |||||||||||| Sbjct: 47051 caggtggttgtactgaaggtatcactgcactgcaaagcgtgcgcgggcaaagtgaagaag 46992 Query: 444 cacctctccaagatgg 459 |||||| ||||||||| Sbjct: 46991 cacctcgccaagatgg 46976