BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf024b23 (1044 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001048695.1| Oryza sativa (japonica cultivar-group) Os01g... 400 e-108 gb|BT017937.1| Zea mays clone EL01N0520G04.c mRNA sequence 383 e-102 emb|CT834891.1| Oryza sativa (indica cultivar-group) cDNA clone:... 339 1e-89 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 331 3e-87 dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic D... 331 3e-87 >ref|NM_001048695.1| Oryza sativa (japonica cultivar-group) Os01g0174000 (Os01g0174000) mRNA, complete cds Length = 612 Score = 400 bits (202), Expect = e-108 Identities = 285/312 (91%), Gaps = 3/312 (0%) Strand = Plus / Plus Query: 525 cgccggcgaggaagcgcgggcggagcgcgggggacaaggagcagaaccggctgaagcggc 584 |||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| Sbjct: 290 cgccggcgaggaagcgagggcggagcgccggcgacaaggagcagaaccggctgaagcggc 349 Query: 585 tgctgcggaaccgcgtgtcggcgcagcaggcgcgggagcggaagaaggcgtacctgacgg 644 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 350 tgctgcggaaccgcgtgtcggcgcagcaggcgcgggagcggaagaaggcgtacatgacgg 409 Query: 645 agctggaggacaaggccaaggacctccagctccgcaatgccgagctcgagcagaaggtct 704 |||| |||| |||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 410 agctcgaggccaaggccaaggacctcgagctccgcaatgccgagctcgagcagcgcgtct 469 Query: 705 ccactctccagaacgagaacaacacgcttcgccagatactgaagaacacgacggcgcacg 764 |||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 470 ccaccctccagaacgagaacaacacgctccgccagatactcaagaacacgacggcgcacg 529 Query: 765 cgagcaagaggggcgggggcggcggcggc---ggcggtaagggtggcgacggcggcaaga 821 | ||||||||||||| |||||||| ||| ||||| | || |||| |||||| |||| Sbjct: 530 ccggcaagaggggcggcggcggcggaggcaagggcggcgatggcggcggcggcgggaaga 589 Query: 822 agcaccacttca 833 ||||||| |||| Sbjct: 590 agcaccatttca 601 Score = 260 bits (131), Expect = 1e-65 Identities = 194/212 (91%), Gaps = 6/212 (2%) Strand = Plus / Plus Query: 260 atggcagcgcaggagcaggagcaggagaagcagcaggcgaagacgagcaccaccagctcg 319 ||||| ||||||||||||||||||||||||||||||| |||||||||||| || |||||| Sbjct: 1 atggcggcgcaggagcaggagcaggagaagcagcaggtgaagacgagcacgacgagctcg 60 Query: 320 ctcccctccagcagcgagcgctcctccagctccgcccccgacaacctcaagga---agga 376 || || || ||||||||||||||||||||||| |||||| ||||||||||||| |||| Sbjct: 61 ctgccgtcgagcagcgagcgctcctccagctcagcccccaacaacctcaaggaaggagga 120 Query: 377 ggggtggagagcgacgaggagatacggcgggtgccggagatgggcggcggcgcgtcggcg 436 |||||||||||||||||||||||||||||||||||||||||||| | || ||| ||| | Sbjct: 121 ggggtggagagcgacgaggagatacggcgggtgccggagatgggag--ggggcggcgg-g 177 Query: 437 tcggcgtcgtcgggggcgggggcggacgagcg 468 |||||||||||||||||||||||||||||||| Sbjct: 178 tcggcgtcgtcgggggcgggggcggacgagcg 209 >gb|BT017937.1| Zea mays clone EL01N0520G04.c mRNA sequence Length = 893 Score = 383 bits (193), Expect = e-102 Identities = 270/295 (91%), Gaps = 3/295 (1%) Strand = Plus / Plus Query: 535 gaagcgcgggcggagcgcgggggacaaggagcagaaccggctgaagcggctgctgcggaa 594 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gaagcgcgggcgcaccgcgggggacaaggagcagaaccggctgaagcggctgctgcggaa 301 Query: 595 ccgcgtgtcggcgcagcaggcgcgggagcggaagaaggcgtacctgacggagctggagga 654 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 ccgcgtgtccgcgcagcaggcgcgggagcggaagaaggcgtacctgacggagctggaggc 361 Query: 655 caaggccaaggacctccagctccgcaatgccgagctcgagcagaaggtctccactctcca 714 |||||||||| ||| ||||||||||||| ||||| |||||| ||| ||||| ||||| Sbjct: 362 gaaggccaagggcctggagctccgcaatgcggagctggagcagcgggtgtccacgctcca 421 Query: 715 gaacgagaacaacacgcttcgccagatactgaagaacacgacggcgcacgcgagcaagag 774 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 422 gaacgagaacaacacgctccgccagattctgaagaacacgacggcgcacgcgagcaagag 481 Query: 775 gggcgggggcggcggcggcggcggtaagggtggcgacggcggcaagaagcaccac 829 | | |||||||||| |||||| ||||| || ||||||||||||||||||||| Sbjct: 482 gtcc---ggcggcggcgccggcggcaagggcggagacggcggcaagaagcaccac 533 Score = 188 bits (95), Expect = 3e-44 Identities = 152/169 (89%), Gaps = 4/169 (2%) Strand = Plus / Plus Query: 301 gacgagcaccaccagctcgctcccctccagcagcgagc-gctcctccagctccgcccccg 359 |||||||||||| |||||||| |||||||||||||| | |||||||||||||||| | | Sbjct: 10 gacgagcaccacgagctcgctgccctccagcagcgacctgctcctccagctccgctcgca 69 Query: 360 acaacctcaaggaaggaggggtggagagcgacgaggagatacggcgggtgccggagatgg 419 ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 70 acaacctcacggaaggaggggcggagagcgacgaggagatacggcgggtgccggagatg- 128 Query: 420 gcggcggcgcgtcggcgtcggcgtcgtcgggggcgggggcggacgagcg 468 |||||||||||||||||||| |||||||| || || ||||| ||||| Sbjct: 129 --ggcggcgcgtcggcgtcggcctcgtcgggcgccggcgcggatgagcg 175 >emb|CT834891.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA106L05, full insert sequence Length = 1018 Score = 339 bits (171), Expect = 1e-89 Identities = 204/215 (94%) Strand = Plus / Plus Query: 525 cgccggcgaggaagcgcgggcggagcgcgggggacaaggagcagaaccggctgaagcggc 584 |||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| Sbjct: 658 cgccggcgaggaagcgagggcggagcgccggcgacaaggagcagaaccggctgaagcggc 717 Query: 585 tgctgcggaaccgcgtgtcggcgcagcaggcgcgggagcggaagaaggcgtacctgacgg 644 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 718 tgctgcggaaccgcgtgtcggcgcagcaggcgcgggagcggaagaaggcgtacatgacgg 777 Query: 645 agctggaggacaaggccaaggacctccagctccgcaatgccgagctcgagcagaaggtct 704 ||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 778 agctggaggccaaggccaaggacctcgagctccgcaatgccgagctcgagcagcgcgtct 837 Query: 705 ccactctccagaacgagaacaacacgcttcgccag 739 |||| ||||||||||||||||||||||| |||||| Sbjct: 838 ccaccctccagaacgagaacaacacgctccgccag 872 Score = 176 bits (89), Expect = 1e-40 Identities = 113/121 (93%) Strand = Plus / Plus Query: 258 agatggcagcgcaggagcaggagcaggagaagcagcaggcgaagacgagcaccaccagct 317 ||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 255 agatggcggcgcaggagcaggagcaggagaagcagcaggcgaagacgagcacgacgagct 314 Query: 318 cgctcccctccagcagcgagcgctcctccagctccgcccccgacaacctcaaggaaggag 377 |||| || || ||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 315 cgctgccgtcgagcagcgagcgctcctccagctcggcccccaacaacctcaaggaaggag 374 Query: 378 g 378 | Sbjct: 375 g 375 Score = 131 bits (66), Expect = 6e-27 Identities = 88/93 (94%), Gaps = 3/93 (3%) Strand = Plus / Plus Query: 376 aggggtggagagcgacgaggagatacggcgggtgccggagatgggcggcggcgcgtcggc 435 |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 485 aggggtggagagcgacgaggagatacggcgggtgccggagatgggcgggggcgg--cgg- 541 Query: 436 gtcggcgtcgtcgggggcgggggcggacgagcg 468 ||||||||||||||||||||||||||||||||| Sbjct: 542 gtcggcgtcgtcgggggcgggggcggacgagcg 574 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 331 bits (167), Expect = 3e-87 Identities = 203/215 (94%) Strand = Plus / Minus Query: 525 cgccggcgaggaagcgcgggcggagcgcgggggacaaggagcagaaccggctgaagcggc 584 |||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| Sbjct: 3810683 cgccggcgaggaagcgagggcggagcgccggcgacaaggagcagaaccggctgaagcggc 3810624 Query: 585 tgctgcggaaccgcgtgtcggcgcagcaggcgcgggagcggaagaaggcgtacctgacgg 644 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3810623 tgctgcggaaccgcgtgtcggcgcagcaggcgcgggagcggaagaaggcgtacatgacgg 3810564 Query: 645 agctggaggacaaggccaaggacctccagctccgcaatgccgagctcgagcagaaggtct 704 |||| |||| |||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 3810563 agctcgaggccaaggccaaggacctcgagctccgcaatgccgagctcgagcagcgcgtct 3810504 Query: 705 ccactctccagaacgagaacaacacgcttcgccag 739 |||| ||||||||||||||||||||||| |||||| Sbjct: 3810503 ccaccctccagaacgagaacaacacgctccgccag 3810469 Score = 168 bits (85), Expect = 3e-38 Identities = 112/121 (92%) Strand = Plus / Minus Query: 258 agatggcagcgcaggagcaggagcaggagaagcagcaggcgaagacgagcaccaccagct 317 ||||||| ||||||||||||||||||||||||||||||| |||||||||||| || |||| Sbjct: 3811071 agatggcggcgcaggagcaggagcaggagaagcagcaggtgaagacgagcacgacgagct 3811012 Query: 318 cgctcccctccagcagcgagcgctcctccagctccgcccccgacaacctcaaggaaggag 377 |||| || || ||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 3811011 cgctgccgtcgagcagcgagcgctcctccagctcagcccccaacaacctcaaggaaggag 3810952 Query: 378 g 378 | Sbjct: 3810951 g 3810951 Score = 123 bits (62), Expect = 2e-24 Identities = 87/93 (93%), Gaps = 3/93 (3%) Strand = Plus / Minus Query: 376 aggggtggagagcgacgaggagatacggcgggtgccggagatgggcggcggcgcgtcggc 435 ||||||||||||||||||||||||||||||||||||||||||||| | || ||| ||| Sbjct: 3810853 aggggtggagagcgacgaggagatacggcgggtgccggagatgggag--ggggcggcgg- 3810797 Query: 436 gtcggcgtcgtcgggggcgggggcggacgagcg 468 ||||||||||||||||||||||||||||||||| Sbjct: 3810796 gtcggcgtcgtcgggggcgggggcggacgagcg 3810764 >dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 331 bits (167), Expect = 3e-87 Identities = 203/215 (94%) Strand = Plus / Minus Query: 525 cgccggcgaggaagcgcgggcggagcgcgggggacaaggagcagaaccggctgaagcggc 584 |||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| Sbjct: 84225 cgccggcgaggaagcgagggcggagcgccggcgacaaggagcagaaccggctgaagcggc 84166 Query: 585 tgctgcggaaccgcgtgtcggcgcagcaggcgcgggagcggaagaaggcgtacctgacgg 644 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 84165 tgctgcggaaccgcgtgtcggcgcagcaggcgcgggagcggaagaaggcgtacatgacgg 84106 Query: 645 agctggaggacaaggccaaggacctccagctccgcaatgccgagctcgagcagaaggtct 704 |||| |||| |||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 84105 agctcgaggccaaggccaaggacctcgagctccgcaatgccgagctcgagcagcgcgtct 84046 Query: 705 ccactctccagaacgagaacaacacgcttcgccag 739 |||| ||||||||||||||||||||||| |||||| Sbjct: 84045 ccaccctccagaacgagaacaacacgctccgccag 84011 Score = 168 bits (85), Expect = 3e-38 Identities = 112/121 (92%) Strand = Plus / Minus Query: 258 agatggcagcgcaggagcaggagcaggagaagcagcaggcgaagacgagcaccaccagct 317 ||||||| ||||||||||||||||||||||||||||||| |||||||||||| || |||| Sbjct: 84613 agatggcggcgcaggagcaggagcaggagaagcagcaggtgaagacgagcacgacgagct 84554 Query: 318 cgctcccctccagcagcgagcgctcctccagctccgcccccgacaacctcaaggaaggag 377 |||| || || ||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 84553 cgctgccgtcgagcagcgagcgctcctccagctcagcccccaacaacctcaaggaaggag 84494 Query: 378 g 378 | Sbjct: 84493 g 84493 Score = 123 bits (62), Expect = 2e-24 Identities = 87/93 (93%), Gaps = 3/93 (3%) Strand = Plus / Minus Query: 376 aggggtggagagcgacgaggagatacggcgggtgccggagatgggcggcggcgcgtcggc 435 ||||||||||||||||||||||||||||||||||||||||||||| | || ||| ||| Sbjct: 84395 aggggtggagagcgacgaggagatacggcgggtgccggagatgggag--ggggcggcgg- 84339 Query: 436 gtcggcgtcgtcgggggcgggggcggacgagcg 468 ||||||||||||||||||||||||||||||||| Sbjct: 84338 gtcggcgtcgtcgggggcgggggcggacgagcg 84306