BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf024a17 (870 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ244422.1| Zea mays clone 7393 mRNA sequence 581 e-162 gb|AF332375.1|AF332375 Zea mays 9S ribosomal protein (lem1) mRNA... 579 e-162 ref|NM_001057929.1| Oryza sativa (japonica cultivar-group) Os03g... 561 e-156 dbj|AK104434.1| Oryza sativa (japonica cultivar-group) cDNA clon... 561 e-156 dbj|AK068283.1| Oryza sativa (japonica cultivar-group) cDNA clon... 561 e-156 >gb|DQ244422.1| Zea mays clone 7393 mRNA sequence Length = 978 Score = 581 bits (293), Expect = e-162 Identities = 467/525 (88%) Strand = Plus / Plus Query: 201 gccgccgactcggtcgaggcggaggcgctcgccgaggaggtgctggccgtggaggcggag 260 |||||||| ||| |||||||||| || ||| ||||||||| |||| || |||| |||| Sbjct: 188 gccgccgaatcgttcgaggcggacctgcccgcggaggaggtgatggctgtcgaggaggag 247 Query: 261 gcggaggaggacgaactgtcgggggtggcgctgcgcaagtacgtgaagcagcggctgccg 320 ||||||||||| | |||||||| | |||||||| ||||| |||||||||||||||||| Sbjct: 248 gcggaggaggatgcgctgtcgggaatcgcgctgcgaaagtatgtgaagcagcggctgccg 307 Query: 321 ggggggttcgcggcgcagcggatcaccgccacgggccgccgcaagacggccagcgcccgc 380 || ||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||| Sbjct: 308 ggcgggttcgcggcgcagcggatcaccgccacgggccgtcgcaagactgccatcgcccgc 367 Query: 381 gtcgtgctccaggagggcactggcaaggtctttatcaacttccgcgacgccaaggagtat 440 |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 368 gtcgtgctccaggagggcaccggcaaggtcttcatcaacttccgcgacgctaaggagtat 427 Query: 441 ttgcaaggaaatccaatatggatggagtactgcaaggttcccctggtgactctagggttc 500 |||| ||||||||||| |||||||||||||||||||| ||| || ||||||||||||| Sbjct: 428 ctgcagggaaatccaatgtggatggagtactgcaaggtgcccttgatgactctagggttt 487 Query: 501 gagaacagctacgacatctttgtcaaagttcacgggggtggtctctctggccagtcccag 560 ||||||| ||| ||| ||||||| ||||| ||||||||||||||||| |||||| ||||| Sbjct: 488 gagaacaactatgacgtctttgtgaaagtacacgggggtggtctctcaggccaggcccag 547 Query: 561 gcaatttgcctcggcgtcgcccgtgcgttggtgaagattagcaatgccaacagagttcct 620 || |||||||| || || ||||||||| |||||||||| |||||||||||||| |||||| Sbjct: 548 gccatttgccttggtgttgcccgtgcgctggtgaagatcagcaatgccaacagggttcct 607 Query: 621 ctgaggtcagaaggtttactgacgagagacacccgtattgttgagaggaagaaggctggt 680 |||| ||| |||||||| ||||| || ||||||||||| ||||| ||||||||||||||| Sbjct: 608 ctgaagtcggaaggtttgctgacaagggacacccgtatcgttgaaaggaagaaggctggt 667 Query: 681 cttaagaaggcccgcaagcgtccccagttctcgaagcgttgagga 725 || |||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 668 ctcaagaaggcacgcaagcggccccagttctcaaagcgttgagga 712 Score = 77.8 bits (39), Expect = 7e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 44 catggcgctctccgtttcctccctcaccaccgccttctcccacctctccctcccctccac 103 ||||||||||||||| ||||||||| || ||||| ||||||||||||||||||| || || Sbjct: 43 catggcgctctccgtctcctccctcgccgccgccctctcccacctctccctcccatcgac 102 Query: 104 ctc 106 ||| Sbjct: 103 ctc 105 >gb|AF332375.1|AF332375 Zea mays 9S ribosomal protein (lem1) mRNA, complete cds; nuclear gene for chloroplast product Length = 945 Score = 579 bits (292), Expect = e-162 Identities = 442/492 (89%) Strand = Plus / Plus Query: 234 gaggaggtgctggccgtggaggcggaggcggaggaggacgaactgtcgggggtggcgctg 293 ||||||||| |||| || |||| ||||| ||||||||| | |||||||| | |||||| Sbjct: 221 gaggaggtgatggctgtcgaggaggaggaggaggaggatgcgctgtcgggaatcgcgctg 280 Query: 294 cgcaagtacgtgaagcagcggctgccgggggggttcgcggcgcagcggatcaccgccacg 353 || ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 281 cgaaagtatgtgaagcagcggctgccgggcgggttcgcggcgcagcggatcaccgccacg 340 Query: 354 ggccgccgcaagacggccagcgcccgcgtcgtgctccaggagggcactggcaaggtcttt 413 ||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 341 ggccgtcgcaagacggccatcgcccgcgtcgtgctccaggagggcaccggcaaggtcttc 400 Query: 414 atcaacttccgcgacgccaaggagtatttgcaaggaaatccaatatggatggagtactgc 473 ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 401 atcaacttccgcgacgctaaggagtatttgcagggaaatccaatgtggatggagtactgc 460 Query: 474 aaggttcccctggtgactctagggttcgagaacagctacgacatctttgtcaaagttcac 533 ||||| ||| || ||||||||||||| ||||| | ||| ||| ||||||| ||||| ||| Sbjct: 461 aaggtacccttgatgactctagggtttgagaagaactatgacgtctttgtgaaagtacac 520 Query: 534 gggggtggtctctctggccagtcccaggcaatttgcctcggcgtcgcccgtgcgttggtg 593 |||||||||||||| |||||| |||||||||||||||| || || ||||||||| ||||| Sbjct: 521 gggggtggtctctcaggccaggcccaggcaatttgccttggtgttgcccgtgcgctggtg 580 Query: 594 aagattagcaatgccaacagagttcctctgaggtcagaaggtttactgacgagagacacc 653 ||||| |||||||||||||| |||||||||| ||| |||||||| ||||| || |||||| Sbjct: 581 aagatcagcaatgccaacagggttcctctgaagtcggaaggtttgctgacaagggacacc 640 Query: 654 cgtattgttgagaggaagaaggctggtcttaagaaggcccgcaagcgtccccagttctcg 713 ||||| ||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 641 cgtatcgttgaaaggaagaaggctggtctcaagaaggcacgcaagcggccccagttctca 700 Query: 714 aagcgttgagga 725 |||||||||||| Sbjct: 701 aagcgttgagga 712 >ref|NM_001057929.1| Oryza sativa (japonica cultivar-group) Os03g0769100 (Os03g0769100) mRNA, complete cds Length = 913 Score = 561 bits (283), Expect = e-156 Identities = 412/455 (90%) Strand = Plus / Plus Query: 266 ggaggacgaactgtcgggggtggcgctgcgcaagtacgtgaagcagcggctgccgggggg 325 ||||||||| ||||| || ||||||||| |||||||||||||||||||| || ||||| Sbjct: 278 ggaggacgagctgtccggaccggcgctgcgaaagtacgtgaagcagcggcttcccggggg 337 Query: 326 gttcgcggcgcagcggatcaccgccacgggccgccgcaagacggccagcgcccgcgtcgt 385 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 338 cttcgcggcgcagcggatcaccgccacgggccgccgcaagacggccatcgcccgcgtcgt 397 Query: 386 gctccaggagggcactggcaaggtctttatcaacttccgcgacgccaaggagtatttgca 445 ||||||||||||||| || | ||| || |||||||||||||| ||||||||||||||||| Sbjct: 398 gctccaggagggcaccggaagggtgttcatcaacttccgcgatgccaaggagtatttgca 457 Query: 446 aggaaatccaatatggatggagtactgcaaggttcccctggtgactctagggttcgagaa 505 |||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 458 aggaaatccaatgtggatggagtactgcaaggtacccctggtgaccctagggttcgagaa 517 Query: 506 cagctacgacatctttgtcaaagttcacgggggtggtctctctggccagtcccaggcaat 565 |||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||| || Sbjct: 518 cagctacgacgtcttcgtcaaagttcacgggggtggtctctcgggccaagcccaggccat 577 Query: 566 ttgcctcggcgtcgcccgtgcgttggtgaagattagcaatgccaacagagttcctctgag 625 ||||||||||||||||||||| |||||||||| |||| || |||| |||| ||||||| Sbjct: 578 ttgcctcggcgtcgcccgtgcactggtgaagatcagcaccgcaaacaaagttactctgag 637 Query: 626 gtcagaaggtttactgacgagagacacccgtattgttgagaggaagaaggctggtcttaa 685 | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 638 gggagaaggtttgctgacaagagacacccgtatagttgaaaggaagaaggctggtcttaa 697 Query: 686 gaaggcccgcaagcgtccccagttctcgaagcgtt 720 |||||| |||||||| || |||||||| ||||||| Sbjct: 698 gaaggcacgcaagcgcccgcagttctcaaagcgtt 732 Score = 105 bits (53), Expect = 3e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 62 ctccctcaccaccgccttctcccacctctccctcccctccacctcgaagccccacccgcc 121 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 71 ctccctcaccaccgccttctcccacctctccctcccctccacctccaagttccacccgct 130 Query: 122 ccctctcctccgcctcc 138 ||| ||||||| ||||| Sbjct: 131 ccccctcctccacctcc 147 >dbj|AK104434.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D02, full insert sequence Length = 895 Score = 561 bits (283), Expect = e-156 Identities = 412/455 (90%) Strand = Plus / Plus Query: 266 ggaggacgaactgtcgggggtggcgctgcgcaagtacgtgaagcagcggctgccgggggg 325 ||||||||| ||||| || ||||||||| |||||||||||||||||||| || ||||| Sbjct: 272 ggaggacgagctgtccggaccggcgctgcgaaagtacgtgaagcagcggcttcccggggg 331 Query: 326 gttcgcggcgcagcggatcaccgccacgggccgccgcaagacggccagcgcccgcgtcgt 385 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 332 cttcgcggcgcagcggatcaccgccacgggccgccgcaagacggccatcgcccgcgtcgt 391 Query: 386 gctccaggagggcactggcaaggtctttatcaacttccgcgacgccaaggagtatttgca 445 ||||||||||||||| || | ||| || |||||||||||||| ||||||||||||||||| Sbjct: 392 gctccaggagggcaccggaagggtgttcatcaacttccgcgatgccaaggagtatttgca 451 Query: 446 aggaaatccaatatggatggagtactgcaaggttcccctggtgactctagggttcgagaa 505 |||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 452 aggaaatccaatgtggatggagtactgcaaggtacccctggtgaccctagggttcgagaa 511 Query: 506 cagctacgacatctttgtcaaagttcacgggggtggtctctctggccagtcccaggcaat 565 |||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||| || Sbjct: 512 cagctacgacgtcttcgtcaaagttcacgggggtggtctctcgggccaagcccaggccat 571 Query: 566 ttgcctcggcgtcgcccgtgcgttggtgaagattagcaatgccaacagagttcctctgag 625 ||||||||||||||||||||| |||||||||| |||| || |||| |||| ||||||| Sbjct: 572 ttgcctcggcgtcgcccgtgcactggtgaagatcagcaccgcaaacaaagttactctgag 631 Query: 626 gtcagaaggtttactgacgagagacacccgtattgttgagaggaagaaggctggtcttaa 685 | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 632 gggagaaggtttgctgacaagagacacccgtatagttgaaaggaagaaggctggtcttaa 691 Query: 686 gaaggcccgcaagcgtccccagttctcgaagcgtt 720 |||||| |||||||| || |||||||| ||||||| Sbjct: 692 gaaggcacgcaagcgcccgcagttctcaaagcgtt 726 Score = 105 bits (53), Expect = 3e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 62 ctccctcaccaccgccttctcccacctctccctcccctccacctcgaagccccacccgcc 121 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 65 ctccctcaccaccgccttctcccacctctccctcccctccacctccaagttccacccgct 124 Query: 122 ccctctcctccgcctcc 138 ||| ||||||| ||||| Sbjct: 125 ccccctcctccacctcc 141 >dbj|AK068283.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146D21, full insert sequence Length = 914 Score = 561 bits (283), Expect = e-156 Identities = 412/455 (90%) Strand = Plus / Plus Query: 266 ggaggacgaactgtcgggggtggcgctgcgcaagtacgtgaagcagcggctgccgggggg 325 ||||||||| ||||| || ||||||||| |||||||||||||||||||| || ||||| Sbjct: 279 ggaggacgagctgtccggaccggcgctgcgaaagtacgtgaagcagcggcttcccggggg 338 Query: 326 gttcgcggcgcagcggatcaccgccacgggccgccgcaagacggccagcgcccgcgtcgt 385 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 339 cttcgcggcgcagcggatcaccgccacgggccgccgcaagacggccatcgcccgcgtcgt 398 Query: 386 gctccaggagggcactggcaaggtctttatcaacttccgcgacgccaaggagtatttgca 445 ||||||||||||||| || | ||| || |||||||||||||| ||||||||||||||||| Sbjct: 399 gctccaggagggcaccggaagggtgttcatcaacttccgcgatgccaaggagtatttgca 458 Query: 446 aggaaatccaatatggatggagtactgcaaggttcccctggtgactctagggttcgagaa 505 |||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 459 aggaaatccaatgtggatggagtactgcaaggtacccctggtgaccctagggttcgagaa 518 Query: 506 cagctacgacatctttgtcaaagttcacgggggtggtctctctggccagtcccaggcaat 565 |||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||| || Sbjct: 519 cagctacgacgtcttcgtcaaagttcacgggggtggtctctcgggccaagcccaggccat 578 Query: 566 ttgcctcggcgtcgcccgtgcgttggtgaagattagcaatgccaacagagttcctctgag 625 ||||||||||||||||||||| |||||||||| |||| || |||| |||| ||||||| Sbjct: 579 ttgcctcggcgtcgcccgtgcactggtgaagatcagcaccgcaaacaaagttactctgag 638 Query: 626 gtcagaaggtttactgacgagagacacccgtattgttgagaggaagaaggctggtcttaa 685 | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 639 gggagaaggtttgctgacaagagacacccgtatagttgaaaggaagaaggctggtcttaa 698 Query: 686 gaaggcccgcaagcgtccccagttctcgaagcgtt 720 |||||| |||||||| || |||||||| ||||||| Sbjct: 699 gaaggcacgcaagcgcccgcagttctcaaagcgtt 733 Score = 105 bits (53), Expect = 3e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 62 ctccctcaccaccgccttctcccacctctccctcccctccacctcgaagccccacccgcc 121 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 ctccctcaccaccgccttctcccacctctccctcccctccacctccaagttccacccgct 131 Query: 122 ccctctcctccgcctcc 138 ||| ||||||| ||||| Sbjct: 132 ccccctcctccacctcc 148