BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf023n22 (967 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001066151.1| Oryza sativa (japonica cultivar-group) Os07g... 216 1e-52 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 216 1e-52 dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic D... 216 1e-52 dbj|AK108961.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 1e-52 gb|AY111744.1| Zea mays CL25923_1 mRNA sequence 103 1e-18 >ref|NM_001066151.1| Oryza sativa (japonica cultivar-group) Os07g0474300 (Os07g0474300) mRNA, complete cds Length = 1196 Score = 216 bits (109), Expect = 1e-52 Identities = 145/157 (92%) Strand = Plus / Plus Query: 392 cgccgacaagcccgctcttcgagaggggcaggttctacgacctctactccgcgcggcgca 451 ||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 461 cgccgaccagcccgctgttcgagaggggcaggctctacgacctctactccgcgcggcgca 520 Query: 452 acgagcggctcaagcgcaagcacgggttccccgccggcgatgaggaagcggaggccatgg 511 ||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 521 acgagcggctcaagcgcaagcacggcttccccgccggcgaggaggaagcggaggcgatgg 580 Query: 512 ctgaggacccctgcgtggccatcgagctgtccaagcg 548 | | ||||||||||| ||| ||||||| |||||||| Sbjct: 581 ccgccgacccctgcgtcgccgtcgagctctccaagcg 617 Score = 107 bits (54), Expect = 8e-20 Identities = 131/156 (83%), Gaps = 3/156 (1%) Strand = Plus / Plus Query: 138 cgccgccgggcgccctcccctggcgtcctccctccagaccgcgccaggattgatcaagaa 197 ||||||| |||||| ||| |||| | |||| |||||||| ||||||||| ||||||||| Sbjct: 180 cgccgccccgcgcccgcccgtggcttgctccgtccagaccccgccaggatcgatcaagaa 239 Query: 198 agcccagaccccgatgcgctcgtccatctgcgcgctcccgccgtcgtcccgcctcgagcc 257 ||| |||||||||||||| ||| |||||||||||||| |||| |||||| ||||| Sbjct: 240 agcaactaccccgatgcgctcctccttctgcgcgctcccgacgtc---ccgccttgagcc 296 Query: 258 cagcccgcgcgcgaagctggacttcgccgccgcgcc 293 | ||||| |||||||||||||||||||| ||||| Sbjct: 297 gacgccgcgggcgaagctggacttcgccgcggcgcc 332 Score = 95.6 bits (48), Expect = 3e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 74 gatccatggaccgccgcccgccgctcgccgtatccccgcgccggctgcgcccgcgcccgc 133 ||||||||||||||||||||||||||||||| ||||||||| |||| || |||||||||| Sbjct: 101 gatccatggaccgccgcccgccgctcgccgtctccccgcgcaggctccgtccgcgcccgc 160 Query: 134 accacgccgccg 145 ||| ||| |||| Sbjct: 161 accgcgctgccg 172 >dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 216 bits (109), Expect = 1e-52 Identities = 145/157 (92%) Strand = Plus / Plus Query: 392 cgccgacaagcccgctcttcgagaggggcaggttctacgacctctactccgcgcggcgca 451 ||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 17036782 cgccgaccagcccgctgttcgagaggggcaggctctacgacctctactccgcgcggcgca 17036841 Query: 452 acgagcggctcaagcgcaagcacgggttccccgccggcgatgaggaagcggaggccatgg 511 ||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 17036842 acgagcggctcaagcgcaagcacggcttccccgccggcgaggaggaagcggaggcgatgg 17036901 Query: 512 ctgaggacccctgcgtggccatcgagctgtccaagcg 548 | | ||||||||||| ||| ||||||| |||||||| Sbjct: 17036902 ccgccgacccctgcgtcgccgtcgagctctccaagcg 17036938 Score = 95.6 bits (48), Expect = 3e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 74 gatccatggaccgccgcccgccgctcgccgtatccccgcgccggctgcgcccgcgcccgc 133 ||||||||||||||||||||||||||||||| ||||||||| |||| || |||||||||| Sbjct: 17036081 gatccatggaccgccgcccgccgctcgccgtctccccgcgcaggctccgtccgcgcccgc 17036140 Query: 134 accacgccgccg 145 ||| ||| |||| Sbjct: 17036141 accgcgctgccg 17036152 Score = 83.8 bits (42), Expect = 1e-12 Identities = 95/112 (84%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 182 caggattgatcaagaaagcccagaccccgatgcgctcgtccatctgcgcgctcccgccgt 241 |||||| |||||||||||| |||||||||||||| ||| |||||||||||||| ||| Sbjct: 17036545 caggatcgatcaagaaagcaactaccccgatgcgctcctccttctgcgcgctcccgacgt 17036604 Query: 242 cgtcccgcctcgagcccagcccgcgcgcgaagctggacttcgccgccgcgcc 293 | |||||| ||||| | ||||| |||||||||||||||||||| ||||| Sbjct: 17036605 c---ccgccttgagccgacgccgcgggcgaagctggacttcgccgcggcgcc 17036653 >dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0016H06 Length = 148158 Score = 216 bits (109), Expect = 1e-52 Identities = 145/157 (92%) Strand = Plus / Plus Query: 392 cgccgacaagcccgctcttcgagaggggcaggttctacgacctctactccgcgcggcgca 451 ||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 116193 cgccgaccagcccgctgttcgagaggggcaggctctacgacctctactccgcgcggcgca 116252 Query: 452 acgagcggctcaagcgcaagcacgggttccccgccggcgatgaggaagcggaggccatgg 511 ||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 116253 acgagcggctcaagcgcaagcacggcttccccgccggcgaggaggaagcggaggcgatgg 116312 Query: 512 ctgaggacccctgcgtggccatcgagctgtccaagcg 548 | | ||||||||||| ||| ||||||| |||||||| Sbjct: 116313 ccgccgacccctgcgtcgccgtcgagctctccaagcg 116349 Score = 95.6 bits (48), Expect = 3e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 74 gatccatggaccgccgcccgccgctcgccgtatccccgcgccggctgcgcccgcgcccgc 133 ||||||||||||||||||||||||||||||| ||||||||| |||| || |||||||||| Sbjct: 115492 gatccatggaccgccgcccgccgctcgccgtctccccgcgcaggctccgtccgcgcccgc 115551 Query: 134 accacgccgccg 145 ||| ||| |||| Sbjct: 115552 accgcgctgccg 115563 Score = 83.8 bits (42), Expect = 1e-12 Identities = 95/112 (84%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 182 caggattgatcaagaaagcccagaccccgatgcgctcgtccatctgcgcgctcccgccgt 241 |||||| |||||||||||| |||||||||||||| ||| |||||||||||||| ||| Sbjct: 115956 caggatcgatcaagaaagcaactaccccgatgcgctcctccttctgcgcgctcccgacgt 116015 Query: 242 cgtcccgcctcgagcccagcccgcgcgcgaagctggacttcgccgccgcgcc 293 | |||||| ||||| | ||||| |||||||||||||||||||| ||||| Sbjct: 116016 c---ccgccttgagccgacgccgcgggcgaagctggacttcgccgcggcgcc 116064 >dbj|AK108961.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-D03, full insert sequence Length = 1196 Score = 216 bits (109), Expect = 1e-52 Identities = 145/157 (92%) Strand = Plus / Plus Query: 392 cgccgacaagcccgctcttcgagaggggcaggttctacgacctctactccgcgcggcgca 451 ||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 461 cgccgaccagcccgctgttcgagaggggcaggctctacgacctctactccgcgcggcgca 520 Query: 452 acgagcggctcaagcgcaagcacgggttccccgccggcgatgaggaagcggaggccatgg 511 ||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 521 acgagcggctcaagcgcaagcacggcttccccgccggcgaggaggaagcggaggcgatgg 580 Query: 512 ctgaggacccctgcgtggccatcgagctgtccaagcg 548 | | ||||||||||| ||| ||||||| |||||||| Sbjct: 581 ccgccgacccctgcgtcgccgtcgagctctccaagcg 617 Score = 107 bits (54), Expect = 8e-20 Identities = 131/156 (83%), Gaps = 3/156 (1%) Strand = Plus / Plus Query: 138 cgccgccgggcgccctcccctggcgtcctccctccagaccgcgccaggattgatcaagaa 197 ||||||| |||||| ||| |||| | |||| |||||||| ||||||||| ||||||||| Sbjct: 180 cgccgccccgcgcccgcccgtggcttgctccgtccagaccccgccaggatcgatcaagaa 239 Query: 198 agcccagaccccgatgcgctcgtccatctgcgcgctcccgccgtcgtcccgcctcgagcc 257 ||| |||||||||||||| ||| |||||||||||||| |||| |||||| ||||| Sbjct: 240 agcaactaccccgatgcgctcctccttctgcgcgctcccgacgtc---ccgccttgagcc 296 Query: 258 cagcccgcgcgcgaagctggacttcgccgccgcgcc 293 | ||||| |||||||||||||||||||| ||||| Sbjct: 297 gacgccgcgggcgaagctggacttcgccgcggcgcc 332 Score = 95.6 bits (48), Expect = 3e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 74 gatccatggaccgccgcccgccgctcgccgtatccccgcgccggctgcgcccgcgcccgc 133 ||||||||||||||||||||||||||||||| ||||||||| |||| || |||||||||| Sbjct: 101 gatccatggaccgccgcccgccgctcgccgtctccccgcgcaggctccgtccgcgcccgc 160 Query: 134 accacgccgccg 145 ||| ||| |||| Sbjct: 161 accgcgctgccg 172 >gb|AY111744.1| Zea mays CL25923_1 mRNA sequence Length = 558 Score = 103 bits (52), Expect = 1e-18 Identities = 67/72 (93%) Strand = Plus / Minus Query: 402 cccgctcttcgagaggggcaggttctacgacctctactccgcgcggcgcaacgagcggct 461 ||||||||||| | |||||||| |||||||||||||||| ||||| |||||||||||||| Sbjct: 499 cccgctcttcgtgcggggcaggctctacgacctctactcggcgcgccgcaacgagcggct 440 Query: 462 caagcgcaagca 473 |||||||||||| Sbjct: 439 caagcgcaagca 428