BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf023j20 (1128 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001048625.1| Oryza sativa (japonica cultivar-group) Os01g... 369 2e-98 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 369 2e-98 dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic D... 369 2e-98 dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic D... 369 2e-98 dbj|AK103707.1| Oryza sativa (japonica cultivar-group) cDNA clon... 369 2e-98 >ref|NM_001048625.1| Oryza sativa (japonica cultivar-group) Os01g0160800 (Os01g0160800) mRNA, complete cds Length = 1271 Score = 369 bits (186), Expect = 2e-98 Identities = 328/375 (87%), Gaps = 9/375 (2%) Strand = Plus / Plus Query: 139 gcagcgacaactacggcgacttcatcgccggcctccgccacaggctcggcaacccgaagc 198 |||||||||||||||||||||||||||||||| ||||| | ||| | | |||||||| || Sbjct: 103 gcagcgacaactacggcgacttcatcgccggcatccgcaagagggtggccaacccgaggc 162 Query: 199 acttctcacacaaccgccccgtcctcccgccggtcgagcccaacgtcccgcctcgccggt 258 ||||||| |||||||||||||||||||||||||| |||||| |||||||||| ||||| | Sbjct: 163 acttctcccacaaccgccccgtcctcccgccggtggagcccgacgtcccgccgcgccgct 222 Query: 259 ggttccacgtcgtgctcaagacgcagaccagcgcgctcacgctcgcgacgcgcgccgaca 318 ||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| Sbjct: 223 ggttccacgtcgtgctccggacgcagaccagcgagctcacgctcgccacgcgcgccgaca 282 Query: 319 acctctacctggagggcttccggagcagcgacggca------cgtggtgggagctcaccc 372 |||||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 283 acctctacctggagggcttccgcggcagcgacggcaccagcgcgtggtgggagctcaccc 342 Query: 373 gcggtctcattgatccccgcgccacgtacgtggggttcggcggcacgtaccgcgacctcc 432 |||| ||||| | || ||||||| ||| | || ||||||||| |||||||||| |||| Sbjct: 343 gcggcctcatcg---ccggcgccacctacctcggcttcggcggctcgtaccgcgagctcc 399 Query: 433 tcggccacacggacaagctggtcgacgtcgccctcggcccgcagcagatgacggaggccg 492 |||| ||||||||||| |||||| ||| | ||||||||||||||||||||| |||||| Sbjct: 400 tcgggcacacggacaacatggtcggtgtcacgctcggcccgcagcagatgacgcaggccg 459 Query: 493 tgaacgtgctcgccg 507 || || |||||||| Sbjct: 460 tggacacgctcgccg 474 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 369 bits (186), Expect = 2e-98 Identities = 328/375 (87%), Gaps = 9/375 (2%) Strand = Plus / Minus Query: 139 gcagcgacaactacggcgacttcatcgccggcctccgccacaggctcggcaacccgaagc 198 |||||||||||||||||||||||||||||||| ||||| | ||| | | |||||||| || Sbjct: 3189205 gcagcgacaactacggcgacttcatcgccggcatccgcaagagggtggccaacccgaggc 3189146 Query: 199 acttctcacacaaccgccccgtcctcccgccggtcgagcccaacgtcccgcctcgccggt 258 ||||||| |||||||||||||||||||||||||| |||||| |||||||||| ||||| | Sbjct: 3189145 acttctcccacaaccgccccgtcctcccgccggtggagcccgacgtcccgccgcgccgct 3189086 Query: 259 ggttccacgtcgtgctcaagacgcagaccagcgcgctcacgctcgcgacgcgcgccgaca 318 ||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| Sbjct: 3189085 ggttccacgtcgtgctccggacgcagaccagcgagctcacgctcgccacgcgcgccgaca 3189026 Query: 319 acctctacctggagggcttccggagcagcgacggca------cgtggtgggagctcaccc 372 |||||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 3189025 acctctacctggagggcttccgcggcagcgacggcaccagcgcgtggtgggagctcaccc 3188966 Query: 373 gcggtctcattgatccccgcgccacgtacgtggggttcggcggcacgtaccgcgacctcc 432 |||| ||||| | || ||||||| ||| | || ||||||||| |||||||||| |||| Sbjct: 3188965 gcggcctcatcg---ccggcgccacctacctcggcttcggcggctcgtaccgcgagctcc 3188909 Query: 433 tcggccacacggacaagctggtcgacgtcgccctcggcccgcagcagatgacggaggccg 492 |||| ||||||||||| |||||| ||| | ||||||||||||||||||||| |||||| Sbjct: 3188908 tcgggcacacggacaacatggtcggtgtcacgctcggcccgcagcagatgacgcaggccg 3188849 Query: 493 tgaacgtgctcgccg 507 || || |||||||| Sbjct: 3188848 tggacacgctcgccg 3188834 Score = 240 bits (121), Expect = 1e-59 Identities = 245/283 (86%), Gaps = 5/283 (1%) Strand = Plus / Plus Query: 94 ccatggcgacgaacccactcttcaccgtgacgttcgacgtcaagagcagcgacaactacg 153 |||||||| |||||| ||||||||||||||||||||||| | ||| |||||||||||| Sbjct: 3444442 ccatggcgttgaacccgctcttcaccgtgacgttcgacgtgagcagcggcgacaactacg 3444501 Query: 154 gcgacttcatcgccggcctccgccacaggctcggcaacccgaagcacttctcacacaacc 213 ||||||||||||||||| ||||| |||| | | |||||||| ||||||||| | ||||| Sbjct: 3444502 gcgacttcatcgccggcatccgcagcagggtggccaacccgaggcacttctcccgcaacc 3444561 Query: 214 gccccgtcctcccgccggtcgagcccaacgtc-ccgcctcgccggtggttccacgtcgtg 272 |||||||||| |||||||| ||| || || | ||||| ||||| ||||||||||||||| Sbjct: 3444562 gccccgtcctgccgccggtggag-ccgccgccgccgccgcgccgctggttccacgtcgtg 3444620 Query: 273 ctc---aagacgcagaccagcgcgctcacgctcgcgacgcgcgccgacaacctctacctg 329 ||| | ||| |||| ||||||||||||||| |||||||||||||||||||||||| Sbjct: 3444621 ctccgggcgtcgccgaccgccgcgctcacgctcgccacgcgcgccgacaacctctacctg 3444680 Query: 330 gagggcttccggagcagcgacggcacgtggtgggagctcaccc 372 ||||| ||||||||||||||||| | ||||||||||||||||| Sbjct: 3444681 gagggattccggagcagcgacgggaggtggtgggagctcaccc 3444723 Score = 155 bits (78), Expect = 5e-34 Identities = 186/222 (83%) Strand = Plus / Plus Query: 392 cgccacgtacgtggggttcggcggcacgtaccgcgacctcctcggccacacggacaagct 451 |||||| ||||| || ||||||||| |||||||||||||||||||| ||||||||| ||| Sbjct: 3444758 cgccacctacgtcggcttcggcggctcgtaccgcgacctcctcggcgacacggacaggct 3444817 Query: 452 ggtcgacgtcgccctcggcccgcagcagatgacggaggccgtgaacgtgctcgccgcgcg 511 || |||| | |||||||||||||||||| || |||| ||||||| |||||||||||| Sbjct: 3444818 caccgtcgtcacgctcggcccgcagcagatggcgcaggcggtgaacgcgctcgccgcgcg 3444877 Query: 512 caccagggccgacctcacctccggcccgaagcagcagcgggcgagggaagcgctggtggc 571 || |||||||||| || |||| || ||||| ||| || | ||| ||| ||| ||| Sbjct: 3444878 caggccggccgacctcgccaacggcgcggcgcagcggcgcgccatggacgcggtggcggc 3444937 Query: 572 gctgcttctcatggtgcacgaggccacgcggttccagaccgt 613 |||||| || |||||||||||||| ||||||||||||||||| Sbjct: 3444938 gctgctcctgatggtgcacgaggcgacgcggttccagaccgt 3444979 Score = 81.8 bits (41), Expect = 6e-12 Identities = 119/145 (82%) Strand = Plus / Plus Query: 732 acggatgcgcggccgccggggcagttcacgccgtttaaggacatggacgtgatgacggcg 791 ||||| ||||||||||||| | |||| ||||| | | |||||||| |||| |||| | Sbjct: 3445098 acggacgcgcggccgccggcgaggttcgcgccgctgagggacatgggcgtggacacggtg 3445157 Query: 792 gagaaggcggccgagacggtgggcatcttgctgttcgtggaggtgccgggtgggatgacg 851 ||| ||||||| | ||||||||| ||| |||||||||| ||||| || || ||||||||| Sbjct: 3445158 gaggaggcggcggcgacggtggggatcctgctgttcgtcgaggtccccggcgggatgacg 3445217 Query: 852 gccgcgacggcgttgcagctgttcc 876 || |||| |||| | |||||||||| Sbjct: 3445218 gcggcgagggcgctccagctgttcc 3445242 >dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1189A09 Length = 167761 Score = 369 bits (186), Expect = 2e-98 Identities = 328/375 (87%), Gaps = 9/375 (2%) Strand = Plus / Minus Query: 139 gcagcgacaactacggcgacttcatcgccggcctccgccacaggctcggcaacccgaagc 198 |||||||||||||||||||||||||||||||| ||||| | ||| | | |||||||| || Sbjct: 6834 gcagcgacaactacggcgacttcatcgccggcatccgcaagagggtggccaacccgaggc 6775 Query: 199 acttctcacacaaccgccccgtcctcccgccggtcgagcccaacgtcccgcctcgccggt 258 ||||||| |||||||||||||||||||||||||| |||||| |||||||||| ||||| | Sbjct: 6774 acttctcccacaaccgccccgtcctcccgccggtggagcccgacgtcccgccgcgccgct 6715 Query: 259 ggttccacgtcgtgctcaagacgcagaccagcgcgctcacgctcgcgacgcgcgccgaca 318 ||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| Sbjct: 6714 ggttccacgtcgtgctccggacgcagaccagcgagctcacgctcgccacgcgcgccgaca 6655 Query: 319 acctctacctggagggcttccggagcagcgacggca------cgtggtgggagctcaccc 372 |||||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 6654 acctctacctggagggcttccgcggcagcgacggcaccagcgcgtggtgggagctcaccc 6595 Query: 373 gcggtctcattgatccccgcgccacgtacgtggggttcggcggcacgtaccgcgacctcc 432 |||| ||||| | || ||||||| ||| | || ||||||||| |||||||||| |||| Sbjct: 6594 gcggcctcatcg---ccggcgccacctacctcggcttcggcggctcgtaccgcgagctcc 6538 Query: 433 tcggccacacggacaagctggtcgacgtcgccctcggcccgcagcagatgacggaggccg 492 |||| ||||||||||| |||||| ||| | ||||||||||||||||||||| |||||| Sbjct: 6537 tcgggcacacggacaacatggtcggtgtcacgctcggcccgcagcagatgacgcaggccg 6478 Query: 493 tgaacgtgctcgccg 507 || || |||||||| Sbjct: 6477 tggacacgctcgccg 6463 >dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0041E11 Length = 146335 Score = 369 bits (186), Expect = 2e-98 Identities = 328/375 (87%), Gaps = 9/375 (2%) Strand = Plus / Minus Query: 139 gcagcgacaactacggcgacttcatcgccggcctccgccacaggctcggcaacccgaagc 198 |||||||||||||||||||||||||||||||| ||||| | ||| | | |||||||| || Sbjct: 132993 gcagcgacaactacggcgacttcatcgccggcatccgcaagagggtggccaacccgaggc 132934 Query: 199 acttctcacacaaccgccccgtcctcccgccggtcgagcccaacgtcccgcctcgccggt 258 ||||||| |||||||||||||||||||||||||| |||||| |||||||||| ||||| | Sbjct: 132933 acttctcccacaaccgccccgtcctcccgccggtggagcccgacgtcccgccgcgccgct 132874 Query: 259 ggttccacgtcgtgctcaagacgcagaccagcgcgctcacgctcgcgacgcgcgccgaca 318 ||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| Sbjct: 132873 ggttccacgtcgtgctccggacgcagaccagcgagctcacgctcgccacgcgcgccgaca 132814 Query: 319 acctctacctggagggcttccggagcagcgacggca------cgtggtgggagctcaccc 372 |||||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 132813 acctctacctggagggcttccgcggcagcgacggcaccagcgcgtggtgggagctcaccc 132754 Query: 373 gcggtctcattgatccccgcgccacgtacgtggggttcggcggcacgtaccgcgacctcc 432 |||| ||||| | || ||||||| ||| | || ||||||||| |||||||||| |||| Sbjct: 132753 gcggcctcatcg---ccggcgccacctacctcggcttcggcggctcgtaccgcgagctcc 132697 Query: 433 tcggccacacggacaagctggtcgacgtcgccctcggcccgcagcagatgacggaggccg 492 |||| ||||||||||| |||||| ||| | ||||||||||||||||||||| |||||| Sbjct: 132696 tcgggcacacggacaacatggtcggtgtcacgctcggcccgcagcagatgacgcaggccg 132637 Query: 493 tgaacgtgctcgccg 507 || || |||||||| Sbjct: 132636 tggacacgctcgccg 132622 >dbj|AK103707.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136O07, full insert sequence Length = 1217 Score = 369 bits (186), Expect = 2e-98 Identities = 328/375 (87%), Gaps = 9/375 (2%) Strand = Plus / Plus Query: 139 gcagcgacaactacggcgacttcatcgccggcctccgccacaggctcggcaacccgaagc 198 |||||||||||||||||||||||||||||||| ||||| | ||| | | |||||||| || Sbjct: 127 gcagcgacaactacggcgacttcatcgccggcatccgcaagagggtggccaacccgaggc 186 Query: 199 acttctcacacaaccgccccgtcctcccgccggtcgagcccaacgtcccgcctcgccggt 258 ||||||| |||||||||||||||||||||||||| |||||| |||||||||| ||||| | Sbjct: 187 acttctcccacaaccgccccgtcctcccgccggtggagcccgacgtcccgccgcgccgct 246 Query: 259 ggttccacgtcgtgctcaagacgcagaccagcgcgctcacgctcgcgacgcgcgccgaca 318 ||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| Sbjct: 247 ggttccacgtcgtgctccggacgcagaccagcgagctcacgctcgccacgcgcgccgaca 306 Query: 319 acctctacctggagggcttccggagcagcgacggca------cgtggtgggagctcaccc 372 |||||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 307 acctctacctggagggcttccgcggcagcgacggcaccagcgcgtggtgggagctcaccc 366 Query: 373 gcggtctcattgatccccgcgccacgtacgtggggttcggcggcacgtaccgcgacctcc 432 |||| ||||| | || ||||||| ||| | || ||||||||| |||||||||| |||| Sbjct: 367 gcggcctcatcg---ccggcgccacctacctcggcttcggcggctcgtaccgcgagctcc 423 Query: 433 tcggccacacggacaagctggtcgacgtcgccctcggcccgcagcagatgacggaggccg 492 |||| ||||||||||| |||||| ||| | ||||||||||||||||||||| |||||| Sbjct: 424 tcgggcacacggacaacatggtcggtgtcacgctcggcccgcagcagatgacgcaggccg 483 Query: 493 tgaacgtgctcgccg 507 || || |||||||| Sbjct: 484 tggacacgctcgccg 498