BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphylf003m01
         (1131 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AY108412.1| Zea mays PCO105605 mRNA sequence                       234   6e-58
ref|NM_001056662.1| Oryza sativa (japonica cultivar-group) Os03g...   194   5e-46
gb|AY656247.1| Oryza sativa (japonica cultivar-group) 17.7 kDa l...   194   5e-46
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...   194   5e-46
dbj|AB110172.1| Oryza sativa (japonica cultivar-group) mRNA for ...   194   5e-46

>gb|AY108412.1| Zea mays PCO105605 mRNA sequence
          Length = 832

 Score =  234 bits (118), Expect = 6e-58
 Identities = 197/222 (88%), Gaps = 1/222 (0%)
 Strand = Plus / Plus

                                                                       
Query: 348 cgtcgtcgctgaacccgaacgcgccgctgttcatcccggcggcgttccggcgggtcgagg 407
           |||||||||||||||| ||||||||||| |||||||||||||||| ||||| ||| ||||
Sbjct: 149 cgtcgtcgctgaaccccaacgcgccgctcttcatcccggcggcgtaccggcaggtggagg 208

                                                                       
Query: 408 actactcgcccgagtggtgggagctcgtcaagaccaccgcctggttccgcgaccactggt 467
           | | |||||| |||||||  ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 209 aattctcgccagagtggtacgagctcgtcaacaccaccgcctggttccgggaccactggt 268

                                                                       
Query: 468 tccaccagcaccagctccacgaggagttcttcgccttcgccgacgacgccgacgtcgacg 527
           ||| ||||||||||| ||||||||    |||||||  ||||| |||||||||  ||||||
Sbjct: 269 tccgccagcaccagcaccacgaggccgccttcgccgccgccgccgacgccgagctcgacg 328

                                                     
Query: 528 tcgccgctctcct-cccgacgactccgtcgacctcctcgaca 568
           ||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 329 tcgccgcgctcctccccgacgactccgtcgacctcctcgaca 370


>ref|NM_001056662.1| Oryza sativa (japonica cultivar-group) Os03g0353400 (Os03g0353400)
           mRNA, complete cds
          Length = 994

 Score =  194 bits (98), Expect = 5e-46
 Identities = 125/134 (93%)
 Strand = Plus / Plus

                                                                       
Query: 349 gtcgtcgctgaacccgaacgcgccgctgttcatcccggcggcgttccggcgggtcgagga 408
           |||||||||||||||| |||||||||| |||||||||||||||||||||| ||| |||||
Sbjct: 147 gtcgtcgctgaacccggacgcgccgctcttcatcccggcggcgttccggcaggtggagga 206

                                                                       
Query: 409 ctactcgcccgagtggtgggagctcgtcaagaccaccgcctggttccgcgaccactggtt 468
           || ||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 207 cttctcgccgcagtggtgggacctcgtcaagaccaccgcctggttccgcgaccactggtt 266

                         
Query: 469 ccaccagcaccagc 482
           |||| |||||||||
Sbjct: 267 ccacgagcaccagc 280


>gb|AY656247.1| Oryza sativa (japonica cultivar-group) 17.7 kDa low temperature
           induced protein mRNA, complete cds
          Length = 1043

 Score =  194 bits (98), Expect = 5e-46
 Identities = 125/134 (93%)
 Strand = Plus / Plus

                                                                       
Query: 349 gtcgtcgctgaacccgaacgcgccgctgttcatcccggcggcgttccggcgggtcgagga 408
           |||||||||||||||| |||||||||| |||||||||||||||||||||| ||| |||||
Sbjct: 162 gtcgtcgctgaacccggacgcgccgctcttcatcccggcggcgttccggcaggtggagga 221

                                                                       
Query: 409 ctactcgcccgagtggtgggagctcgtcaagaccaccgcctggttccgcgaccactggtt 468
           || ||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 222 cttctcgccgcagtggtgggacctcgtcaagaccaccgcctggttccgcgaccactggtt 281

                         
Query: 469 ccaccagcaccagc 482
           |||| |||||||||
Sbjct: 282 ccacgagcaccagc 295


>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  194 bits (98), Expect = 5e-46
 Identities = 125/134 (93%)
 Strand = Plus / Plus

                                                                            
Query: 349      gtcgtcgctgaacccgaacgcgccgctgttcatcccggcggcgttccggcgggtcgagga 408
                |||||||||||||||| |||||||||| |||||||||||||||||||||| ||| |||||
Sbjct: 13254782 gtcgtcgctgaacccggacgcgccgctcttcatcccggcggcgttccggcaggtggagga 13254841

                                                                            
Query: 409      ctactcgcccgagtggtgggagctcgtcaagaccaccgcctggttccgcgaccactggtt 468
                || ||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 13254842 cttctcgccgcagtggtgggacctcgtcaagaccaccgcctggttccgcgaccactggtt 13254901

                              
Query: 469      ccaccagcaccagc 482
                |||| |||||||||
Sbjct: 13254902 ccacgagcaccagc 13254915


>dbj|AB110172.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, complete cds, clone: 13YPB022
          Length = 943

 Score =  194 bits (98), Expect = 5e-46
 Identities = 125/134 (93%)
 Strand = Plus / Plus

                                                                       
Query: 349 gtcgtcgctgaacccgaacgcgccgctgttcatcccggcggcgttccggcgggtcgagga 408
           |||||||||||||||| |||||||||| |||||||||||||||||||||| ||| |||||
Sbjct: 107 gtcgtcgctgaacccggacgcgccgctcttcatcccggcggcgttccggcaggtggagga 166

                                                                       
Query: 409 ctactcgcccgagtggtgggagctcgtcaagaccaccgcctggttccgcgaccactggtt 468
           || ||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 167 cttctcgccgcagtggtgggacctcgtcaagaccaccgcctggttccgcgaccactggtt 226

                         
Query: 469 ccaccagcaccagc 482
           |||| |||||||||
Sbjct: 227 ccacgagcaccagc 240