BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf003k22 (1198 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001052616.1| Oryza sativa (japonica cultivar-group) Os02g... 642 0.0 dbj|AK058557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 642 0.0 emb|CT830611.1| Oryza sativa (indica cultivar-group) cDNA clone:... 626 e-176 emb|CT830610.1| Oryza sativa (indica cultivar-group) cDNA clone:... 466 e-127 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 119 3e-23 >ref|NM_001052616.1| Oryza sativa (japonica cultivar-group) Os02g0179100 (Os02g0179100) mRNA, complete cds Length = 1064 Score = 642 bits (324), Expect = 0.0 Identities = 491/546 (89%), Gaps = 3/546 (0%) Strand = Plus / Plus Query: 363 cctccgccatcgacttcctcacgctctgctaccgcctcaagacgaccaagagggcagggt 422 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 210 cctccgccatcgacttcctcacgctctgctaccgcctcaagacgacgaagagggccgggt 269 Query: 423 gggtgaggcgtgacgtgcaaggccccgagtcagtggccgaccacatgtaccgcatgggcg 482 |||||||||| | ||||| || || ||||| || ||||||||||||||||| ||||||| Sbjct: 270 gggtgaggcgcggggtgcaggggccggagtccgtcgccgaccacatgtaccggatgggcg 329 Query: 483 tcatggcgctcgtcgccgcagacctccccggcgtcg---accgcgataggtgtgtgaaga 539 ||||||||||||||||||| ||||| ||| ||| || ||||||| |||||||| |||| Sbjct: 330 tcatggcgctcgtcgccgccgacctgcccagcggcgtgaaccgcgacaggtgtgtcaaga 389 Query: 540 tggcgattgtgcacgacatagccgaagctatcgttggcgatatcaccccttctgatggtg 599 ||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||| | Sbjct: 390 tggcgatcgtgcacgacatagccgaagctattgttggtgatatcaccccttcagatggcg 449 Query: 600 tgcccaaggaagagaagagccgcagggagaaagaagctttggatcatatgtgtggattgc 659 |||| |||||||| ||||||||||| ||| ||||||| ||||| |||||||| | |||| Sbjct: 450 tgccgaaggaagaaaagagccgcagagagcaagaagcattggaccatatgtgcagtttgc 509 Query: 660 ttggtggaggttcaagagccgaagaaattcgtgaactttggatggagtatgaggagaatg 719 | ||||| ||| | ||||| |||||||| ||||||||||||||||| |||||| |||||| Sbjct: 510 tcggtggtggtccgagagctgaagaaatccgtgaactttggatggaatatgagcagaatg 569 Query: 720 cctctttggaagcaaaggttgtcaaagattttgacaaggttgagatgatacttcaagcac 779 || ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 570 ccactttggaagcaaaggttgtgaaagattttgacaaggttgagatgattcttcaagcat 629 Query: 780 tggagtatgaaaaggagcaagggttggacctagaagagttcttccaatcaacagcaggaa 839 ||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||| | Sbjct: 630 tggagtatgaaaaggagcaagggctggacctagaagagtttttccagtcaacagcaggga 689 Query: 840 aatttcagacagacattggaaaagcatgggcagcagagatcgcatccagaagaaagtgaa 899 |||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||||| Sbjct: 690 aatttcagacagacgttggaaaagcatgggcagcagaggtagcatcaagaagaaagtgaa 749 Query: 900 aataac 905 | |||| Sbjct: 750 attaac 755 >dbj|AK058557.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D05, full insert sequence Length = 1064 Score = 642 bits (324), Expect = 0.0 Identities = 491/546 (89%), Gaps = 3/546 (0%) Strand = Plus / Plus Query: 363 cctccgccatcgacttcctcacgctctgctaccgcctcaagacgaccaagagggcagggt 422 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 210 cctccgccatcgacttcctcacgctctgctaccgcctcaagacgacgaagagggccgggt 269 Query: 423 gggtgaggcgtgacgtgcaaggccccgagtcagtggccgaccacatgtaccgcatgggcg 482 |||||||||| | ||||| || || ||||| || ||||||||||||||||| ||||||| Sbjct: 270 gggtgaggcgcggggtgcaggggccggagtccgtcgccgaccacatgtaccggatgggcg 329 Query: 483 tcatggcgctcgtcgccgcagacctccccggcgtcg---accgcgataggtgtgtgaaga 539 ||||||||||||||||||| ||||| ||| ||| || ||||||| |||||||| |||| Sbjct: 330 tcatggcgctcgtcgccgccgacctgcccagcggcgtgaaccgcgacaggtgtgtcaaga 389 Query: 540 tggcgattgtgcacgacatagccgaagctatcgttggcgatatcaccccttctgatggtg 599 ||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||| | Sbjct: 390 tggcgatcgtgcacgacatagccgaagctattgttggtgatatcaccccttcagatggcg 449 Query: 600 tgcccaaggaagagaagagccgcagggagaaagaagctttggatcatatgtgtggattgc 659 |||| |||||||| ||||||||||| ||| ||||||| ||||| |||||||| | |||| Sbjct: 450 tgccgaaggaagaaaagagccgcagagagcaagaagcattggaccatatgtgcagtttgc 509 Query: 660 ttggtggaggttcaagagccgaagaaattcgtgaactttggatggagtatgaggagaatg 719 | ||||| ||| | ||||| |||||||| ||||||||||||||||| |||||| |||||| Sbjct: 510 tcggtggtggtccgagagctgaagaaatccgtgaactttggatggaatatgagcagaatg 569 Query: 720 cctctttggaagcaaaggttgtcaaagattttgacaaggttgagatgatacttcaagcac 779 || ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 570 ccactttggaagcaaaggttgtgaaagattttgacaaggttgagatgattcttcaagcat 629 Query: 780 tggagtatgaaaaggagcaagggttggacctagaagagttcttccaatcaacagcaggaa 839 ||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||| | Sbjct: 630 tggagtatgaaaaggagcaagggctggacctagaagagtttttccagtcaacagcaggga 689 Query: 840 aatttcagacagacattggaaaagcatgggcagcagagatcgcatccagaagaaagtgaa 899 |||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||||| Sbjct: 690 aatttcagacagacgttggaaaagcatgggcagcagaggtagcatcaagaagaaagtgaa 749 Query: 900 aataac 905 | |||| Sbjct: 750 attaac 755 >emb|CT830611.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN012J16, full insert sequence Length = 1166 Score = 626 bits (316), Expect = e-176 Identities = 489/546 (89%), Gaps = 3/546 (0%) Strand = Plus / Plus Query: 363 cctccgccatcgacttcctcacgctctgctaccgcctcaagacgaccaagagggcagggt 422 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 205 cctccgccatcgacttcctcacgctctgctaccgcctcaagacgacgaagagggccgggt 264 Query: 423 gggtgaggcgtgacgtgcaaggccccgagtcagtggccgaccacatgtaccgcatgggcg 482 |||||||||| | ||||| || || ||||| || ||||| ||||||||||| ||||||| Sbjct: 265 gggtgaggcgcggggtgcaggggccggagtccgtcgccgatcacatgtaccggatgggcg 324 Query: 483 tcatggcgctcgtcgccgcagacctccccggcgtcg---accgcgataggtgtgtgaaga 539 ||||||||||||||||||| ||||| ||| ||| | ||||||| |||||||| |||| Sbjct: 325 tcatggcgctcgtcgccgccgacctgcccagcggtgtgaaccgcgacaggtgtgtcaaga 384 Query: 540 tggcgattgtgcacgacatagccgaagctatcgttggcgatatcaccccttctgatggtg 599 ||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||| | Sbjct: 385 tggcgatcgtgcacgacatagccgaagctattgttggtgatatcaccccttcagatggcg 444 Query: 600 tgcccaaggaagagaagagccgcagggagaaagaagctttggatcatatgtgtggattgc 659 |||| |||||||| ||||||||||| ||| ||||||| ||||| |||||||| | |||| Sbjct: 445 tgccgaaggaagaaaagagccgcagagagcaagaagcattggaccatatgtgcagtttgc 504 Query: 660 ttggtggaggttcaagagccgaagaaattcgtgaactttggatggagtatgaggagaatg 719 | ||||| ||| | ||||| |||||||| ||||||||||||||||| |||||| |||||| Sbjct: 505 tcggtggtggtccgagagctgaagaaatccgtgaactttggatggaatatgagcagaatg 564 Query: 720 cctctttggaagcaaaggttgtcaaagattttgacaaggttgagatgatacttcaagcac 779 || ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 565 ccactttggaagcaaaggttgtgaaagattttgacaaggttgagatgattcttcaagcat 624 Query: 780 tggagtatgaaaaggagcaagggttggacctagaagagttcttccaatcaacagcaggaa 839 ||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||| | Sbjct: 625 tggagtatgaaaaggagcaagggctggacctagaagagtttttccagtcaacagcaggga 684 Query: 840 aatttcagacagacattggaaaagcatgggcagcagagatcgcatccagaagaaagtgaa 899 |||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||||| Sbjct: 685 aatttcagacagacgttggaaaagcatgggcagcagaggtagcatcaagaagaaagtgaa 744 Query: 900 aataac 905 | |||| Sbjct: 745 attaac 750 >emb|CT830610.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN009B08, full insert sequence Length = 1106 Score = 466 bits (235), Expect = e-127 Identities = 343/379 (90%) Strand = Plus / Plus Query: 527 aggtgtgtgaagatggcgattgtgcacgacatagccgaagctatcgttggcgatatcacc 586 |||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||| Sbjct: 419 aggtgtgtcaagatggcgatcgtgcacgacatagccgaagctattgttggtgatatcacc 478 Query: 587 ccttctgatggtgtgcccaaggaagagaagagccgcagggagaaagaagctttggatcat 646 ||||| ||||| ||||| |||||||| ||||||||||| ||| ||||||| ||||| ||| Sbjct: 479 ccttcagatggcgtgccgaaggaagaaaagagccgcagagagcaagaagcattggaccat 538 Query: 647 atgtgtggattgcttggtggaggttcaagagccgaagaaattcgtgaactttggatggag 706 ||||| | ||||| ||||| ||| | ||||| |||||||| ||||||||||||||||| Sbjct: 539 atgtgcagtttgctcggtggtggtccgagagctgaagaaatccgtgaactttggatggaa 598 Query: 707 tatgaggagaatgcctctttggaagcaaaggttgtcaaagattttgacaaggttgagatg 766 |||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 599 tatgagcagaatgccactttggaagcaaaggttgtgaaagattttgacaaggttgagatg 658 Query: 767 atacttcaagcactggagtatgaaaaggagcaagggttggacctagaagagttcttccaa 826 || ||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 659 attcttcaagcattggagtatgaaaaggagcaagggctggacctagaagagtttttccag 718 Query: 827 tcaacagcaggaaaatttcagacagacattggaaaagcatgggcagcagagatcgcatcc 886 ||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||| Sbjct: 719 tcaacagcagggaaatttcagacagacgttggaaaagcatgggcagcagaggtagcatca 778 Query: 887 agaagaaagtgaaaataac 905 |||||||||||||| |||| Sbjct: 779 agaagaaagtgaaattaac 797 Score = 184 bits (93), Expect = 6e-43 Identities = 132/145 (91%) Strand = Plus / Plus Query: 363 cctccgccatcgacttcctcacgctctgctaccgcctcaagacgaccaagagggcagggt 422 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 170 cctccgccatcgacttcctcacgctctgctaccgcctcaagacgacgaagagggccgggt 229 Query: 423 gggtgaggcgtgacgtgcaaggccccgagtcagtggccgaccacatgtaccgcatgggcg 482 |||||||||| | ||||| || || ||||| || ||||| ||||||||||| ||||||| Sbjct: 230 gggtgaggcgcggggtgcaggggccggagtccgtcgccgatcacatgtaccggatgggcg 289 Query: 483 tcatggcgctcgtcgccgcagacct 507 ||||||||||||||||||| ||||| Sbjct: 290 tcatggcgctcgtcgccgccgacct 314 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 119 bits (60), Expect = 3e-23 Identities = 75/80 (93%) Strand = Plus / Plus Query: 680 gaagaaattcgtgaactttggatggagtatgaggagaatgcctctttggaagcaaaggtt 739 |||||||| ||||||||||||||||| |||||| |||||||| ||||||||||||||||| Sbjct: 4386268 gaagaaatccgtgaactttggatggaatatgagcagaatgccactttggaagcaaaggtt 4386327 Query: 740 gtcaaagattttgacaaggt 759 || ||||||||||||||||| Sbjct: 4386328 gtgaaagattttgacaaggt 4386347 Score = 115 bits (58), Expect = 4e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 402 agacgaccaagagggcagggtgggtgaggcgtgacgtgcaaggccccgagtcagtggccg 461 ||||||| |||||||| |||||||||||||| | ||||| || || ||||| || |||| Sbjct: 4384529 agacgacgaagagggccgggtgggtgaggcgcggggtgcaggggccggagtccgtcgccg 4384588 Query: 462 accacatgtaccgcatgggcgtcatggcgctcgtcgccgcagacct 507 ||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 4384589 accacatgtaccggatgggcgtcatggcgctcgtcgccgccgacct 4384634 Score = 97.6 bits (49), Expect = 1e-16 Identities = 67/73 (91%) Strand = Plus / Plus Query: 833 gcaggaaaatttcagacagacattggaaaagcatgggcagcagagatcgcatccagaaga 892 ||||| ||||||||||||||| ||||||||||||||||||||||| | ||||| |||||| Sbjct: 4387551 gcagggaaatttcagacagacgttggaaaagcatgggcagcagaggtagcatcaagaaga 4387610 Query: 893 aagtgaaaataac 905 |||||||| |||| Sbjct: 4387611 aagtgaaattaac 4387623 Score = 93.7 bits (47), Expect = 2e-15 Identities = 77/87 (88%) Strand = Plus / Plus Query: 565 agctatcgttggcgatatcaccccttctgatggtgtgcccaaggaagagaagagccgcag 624 |||||| ||||| |||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 4385246 agctattgttggtgatatcaccccttcagatggcgtgccgaaggaagaaaagagccgcag 4385305 Query: 625 ggagaaagaagctttggatcatatgtg 651 ||| ||||||| ||||| |||||||| Sbjct: 4385306 agagcaagaagcattggaccatatgtg 4385332 Score = 81.8 bits (41), Expect = 6e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 363 cctccgccatcgacttcctcacgctctgctaccgcctcaag 403 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4384394 cctccgccatcgacttcctcacgctctgctaccgcctcaag 4384434