BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf003h22 (1004 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001057328.1| Oryza sativa (japonica cultivar-group) Os03g... 325 2e-85 gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome... 325 2e-85 gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genom... 325 2e-85 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 325 2e-85 emb|CT833432.1| Oryza sativa (indica cultivar-group) cDNA clone:... 222 2e-54 >ref|NM_001057328.1| Oryza sativa (japonica cultivar-group) Os03g0651800 (Os03g0651800) mRNA, complete cds Length = 669 Score = 325 bits (164), Expect = 2e-85 Identities = 361/426 (84%), Gaps = 3/426 (0%) Strand = Plus / Plus Query: 355 gacggcggcggacgtggacaagctcccggggctcaataccctgggtgtgtccatggcgcg 414 |||||||||| |||||| | ||| |||||||| || || |||| |||||||||||||| Sbjct: 240 gacggcggcgagcgtggagaggctgccggggctgaacacgatgggggtgtccatggcgcg 299 Query: 415 gatcgactacgcgccgggggggcttaacccgccgcacacccacccgcgcgctacggagat 474 |||||||||||||||| ||||||| | |||||||||||||||||||||||| || ||||| Sbjct: 300 gatcgactacgcgccgtgggggctcagcccgccgcacacccacccgcgcgccaccgagat 359 Query: 475 cgtcttcgtgctcgagggctccctcgacgtcggcttcgtcaccacggccaacaggctctt 534 | | ||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||| Sbjct: 360 catgttcgtcgccgagggcaccctcgacgtcggcttcgtcaccaccgccaacaagctctt 419 Query: 535 cgcccgcaccgtccgcaagggcgaggtgttcgtcttcccccgcggcctcctccacttcca 594 | ||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||||||| Sbjct: 420 cacccgcaccgtcagcaagggggaggtgttcgtcttcccgcgcggcctcgtccacttcca 479 Query: 595 gaagaacagctgcgccaactcggccgccgtcgccatcgcggcgttcagcagccagacgca 654 || ||||| ||| |||| || | || |||||||||| || |||| ||||||| | Sbjct: 480 gaggaaca---gcggcaacacgtcggcgctcgccatcgccgccttcaacagccagctccc 536 Query: 655 gggcacgctgtccgtcgccgactcgctcttcggcgccacgccgccactgcaggccgacgt 714 || |||| |||| |||||||| |||||||||||||| ||||||| |||| | | ||| Sbjct: 537 cgggacgcagtccatcgccgacacgctcttcggcgccgcgccgccgctgccgtcggacac 596 Query: 715 gcttgcccggacgttccaggtcgacagcggcctcgtcgactccatcaagtccaagttccc 774 ||| ||| || |||||||||||||| ||||| | ||||| |||||||||||||||||||| Sbjct: 597 gctggccagggcgttccaggtcgacggcggcatggtcgagtccatcaagtccaagttccc 656 Query: 775 acccaa 780 ||||| Sbjct: 657 gcccaa 662 Score = 208 bits (105), Expect = 3e-50 Identities = 150/165 (90%) Strand = Plus / Plus Query: 111 tcctggtgctcgccgccccctcgctggccggcgatcccgacatgctccaggacatctgcg 170 |||||| |||||||||| |||| || || ||||| |||||||||||||||||| |||||| Sbjct: 38 tcctggcgctcgccgccacctccctcgcaggcgaccccgacatgctccaggacgtctgcg 97 Query: 171 tcgccgattacaaatccctccagggcccattgcggctgaacgggttcccgtgcaagaggc 230 ||||||||||||| ||||||| ||||| |||||||||||||| ||||||||||||||| Sbjct: 98 tcgccgattacaagtccctccgaggcccgctgcggctgaacgggatcccgtgcaagaggc 157 Query: 231 cggagaacgtgacggtgaacgacttcttcttcgacgggctgacga 275 |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 158 tggagaacgtgacggcgaacgacttcttcttcgacgggctgacga 202 >gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 325 bits (164), Expect = 2e-85 Identities = 361/426 (84%), Gaps = 3/426 (0%) Strand = Plus / Plus Query: 355 gacggcggcggacgtggacaagctcccggggctcaataccctgggtgtgtccatggcgcg 414 |||||||||| |||||| | ||| |||||||| || || |||| |||||||||||||| Sbjct: 146677 gacggcggcgagcgtggagaggctgccggggctgaacacgatgggggtgtccatggcgcg 146736 Query: 415 gatcgactacgcgccgggggggcttaacccgccgcacacccacccgcgcgctacggagat 474 |||||||||||||||| ||||||| | |||||||||||||||||||||||| || ||||| Sbjct: 146737 gatcgactacgcgccgtgggggctcagcccgccgcacacccacccgcgcgccaccgagat 146796 Query: 475 cgtcttcgtgctcgagggctccctcgacgtcggcttcgtcaccacggccaacaggctctt 534 | | ||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||| Sbjct: 146797 catgttcgtcgccgagggcaccctcgacgtcggcttcgtcaccaccgccaacaagctctt 146856 Query: 535 cgcccgcaccgtccgcaagggcgaggtgttcgtcttcccccgcggcctcctccacttcca 594 | ||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||||||| Sbjct: 146857 cacccgcaccgtcagcaagggggaggtgttcgtcttcccgcgcggcctcgtccacttcca 146916 Query: 595 gaagaacagctgcgccaactcggccgccgtcgccatcgcggcgttcagcagccagacgca 654 || ||||| ||| |||| || | || |||||||||| || |||| ||||||| | Sbjct: 146917 gaggaaca---gcggcaacacgtcggcgctcgccatcgccgccttcaacagccagctccc 146973 Query: 655 gggcacgctgtccgtcgccgactcgctcttcggcgccacgccgccactgcaggccgacgt 714 || |||| |||| |||||||| |||||||||||||| ||||||| |||| | | ||| Sbjct: 146974 cgggacgcagtccatcgccgacacgctcttcggcgccgcgccgccgctgccgtcggacac 147033 Query: 715 gcttgcccggacgttccaggtcgacagcggcctcgtcgactccatcaagtccaagttccc 774 ||| ||| || |||||||||||||| ||||| | ||||| |||||||||||||||||||| Sbjct: 147034 gctggccagggcgttccaggtcgacggcggcatggtcgagtccatcaagtccaagttccc 147093 Query: 775 acccaa 780 ||||| Sbjct: 147094 gcccaa 147099 Score = 125 bits (63), Expect = 4e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 201 tgcggctgaacgggttcccgtgcaagaggccggagaacgtgacggtgaacgacttcttct 260 |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 146565 tgcggctgaacgggatcccgtgcaagaggctggagaacgtgacggcgaacgacttcttct 146624 Query: 261 tcgacgggctgacga 275 ||||||||||||||| Sbjct: 146625 tcgacgggctgacga 146639 Score = 97.6 bits (49), Expect = 8e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 111 tcctggtgctcgccgccccctcgctggccggcgatcccgacatgctccaggacatctgcg 170 |||||| |||||||||| |||| || || ||||| |||||||||||||||||| |||||| Sbjct: 145775 tcctggcgctcgccgccacctccctcgcaggcgaccccgacatgctccaggacgtctgcg 145834 Query: 171 tcgccgattacaaatccctcc 191 ||||||||||||| ||||||| Sbjct: 145835 tcgccgattacaagtccctcc 145855 >gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete sequence Length = 170020 Score = 325 bits (164), Expect = 2e-85 Identities = 361/426 (84%), Gaps = 3/426 (0%) Strand = Plus / Plus Query: 355 gacggcggcggacgtggacaagctcccggggctcaataccctgggtgtgtccatggcgcg 414 |||||||||| |||||| | ||| |||||||| || || |||| |||||||||||||| Sbjct: 62039 gacggcggcgagcgtggagaggctgccggggctgaacacgatgggggtgtccatggcgcg 62098 Query: 415 gatcgactacgcgccgggggggcttaacccgccgcacacccacccgcgcgctacggagat 474 |||||||||||||||| ||||||| | |||||||||||||||||||||||| || ||||| Sbjct: 62099 gatcgactacgcgccgtgggggctcagcccgccgcacacccacccgcgcgccaccgagat 62158 Query: 475 cgtcttcgtgctcgagggctccctcgacgtcggcttcgtcaccacggccaacaggctctt 534 | | ||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||| Sbjct: 62159 catgttcgtcgccgagggcaccctcgacgtcggcttcgtcaccaccgccaacaagctctt 62218 Query: 535 cgcccgcaccgtccgcaagggcgaggtgttcgtcttcccccgcggcctcctccacttcca 594 | ||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||||||| Sbjct: 62219 cacccgcaccgtcagcaagggggaggtgttcgtcttcccgcgcggcctcgtccacttcca 62278 Query: 595 gaagaacagctgcgccaactcggccgccgtcgccatcgcggcgttcagcagccagacgca 654 || ||||| ||| |||| || | || |||||||||| || |||| ||||||| | Sbjct: 62279 gaggaaca---gcggcaacacgtcggcgctcgccatcgccgccttcaacagccagctccc 62335 Query: 655 gggcacgctgtccgtcgccgactcgctcttcggcgccacgccgccactgcaggccgacgt 714 || |||| |||| |||||||| |||||||||||||| ||||||| |||| | | ||| Sbjct: 62336 cgggacgcagtccatcgccgacacgctcttcggcgccgcgccgccgctgccgtcggacac 62395 Query: 715 gcttgcccggacgttccaggtcgacagcggcctcgtcgactccatcaagtccaagttccc 774 ||| ||| || |||||||||||||| ||||| | ||||| |||||||||||||||||||| Sbjct: 62396 gctggccagggcgttccaggtcgacggcggcatggtcgagtccatcaagtccaagttccc 62455 Query: 775 acccaa 780 ||||| Sbjct: 62456 gcccaa 62461 Score = 125 bits (63), Expect = 4e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 201 tgcggctgaacgggttcccgtgcaagaggccggagaacgtgacggtgaacgacttcttct 260 |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 61927 tgcggctgaacgggatcccgtgcaagaggctggagaacgtgacggcgaacgacttcttct 61986 Query: 261 tcgacgggctgacga 275 ||||||||||||||| Sbjct: 61987 tcgacgggctgacga 62001 Score = 97.6 bits (49), Expect = 8e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 111 tcctggtgctcgccgccccctcgctggccggcgatcccgacatgctccaggacatctgcg 170 |||||| |||||||||| |||| || || ||||| |||||||||||||||||| |||||| Sbjct: 61137 tcctggcgctcgccgccacctccctcgcaggcgaccccgacatgctccaggacgtctgcg 61196 Query: 171 tcgccgattacaaatccctcc 191 ||||||||||||| ||||||| Sbjct: 61197 tcgccgattacaagtccctcc 61217 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 325 bits (164), Expect = 2e-85 Identities = 361/426 (84%), Gaps = 3/426 (0%) Strand = Plus / Plus Query: 355 gacggcggcggacgtggacaagctcccggggctcaataccctgggtgtgtccatggcgcg 414 |||||||||| |||||| | ||| |||||||| || || |||| |||||||||||||| Sbjct: 25121549 gacggcggcgagcgtggagaggctgccggggctgaacacgatgggggtgtccatggcgcg 25121608 Query: 415 gatcgactacgcgccgggggggcttaacccgccgcacacccacccgcgcgctacggagat 474 |||||||||||||||| ||||||| | |||||||||||||||||||||||| || ||||| Sbjct: 25121609 gatcgactacgcgccgtgggggctcagcccgccgcacacccacccgcgcgccaccgagat 25121668 Query: 475 cgtcttcgtgctcgagggctccctcgacgtcggcttcgtcaccacggccaacaggctctt 534 | | ||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||| Sbjct: 25121669 catgttcgtcgccgagggcaccctcgacgtcggcttcgtcaccaccgccaacaagctctt 25121728 Query: 535 cgcccgcaccgtccgcaagggcgaggtgttcgtcttcccccgcggcctcctccacttcca 594 | ||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||||||| Sbjct: 25121729 cacccgcaccgtcagcaagggggaggtgttcgtcttcccgcgcggcctcgtccacttcca 25121788 Query: 595 gaagaacagctgcgccaactcggccgccgtcgccatcgcggcgttcagcagccagacgca 654 || ||||| ||| |||| || | || |||||||||| || |||| ||||||| | Sbjct: 25121789 gaggaaca---gcggcaacacgtcggcgctcgccatcgccgccttcaacagccagctccc 25121845 Query: 655 gggcacgctgtccgtcgccgactcgctcttcggcgccacgccgccactgcaggccgacgt 714 || |||| |||| |||||||| |||||||||||||| ||||||| |||| | | ||| Sbjct: 25121846 cgggacgcagtccatcgccgacacgctcttcggcgccgcgccgccgctgccgtcggacac 25121905 Query: 715 gcttgcccggacgttccaggtcgacagcggcctcgtcgactccatcaagtccaagttccc 774 ||| ||| || |||||||||||||| ||||| | ||||| |||||||||||||||||||| Sbjct: 25121906 gctggccagggcgttccaggtcgacggcggcatggtcgagtccatcaagtccaagttccc 25121965 Query: 775 acccaa 780 ||||| Sbjct: 25121966 gcccaa 25121971 Score = 125 bits (63), Expect = 4e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 201 tgcggctgaacgggttcccgtgcaagaggccggagaacgtgacggtgaacgacttcttct 260 |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 25121437 tgcggctgaacgggatcccgtgcaagaggctggagaacgtgacggcgaacgacttcttct 25121496 Query: 261 tcgacgggctgacga 275 ||||||||||||||| Sbjct: 25121497 tcgacgggctgacga 25121511 Score = 97.6 bits (49), Expect = 8e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 111 tcctggtgctcgccgccccctcgctggccggcgatcccgacatgctccaggacatctgcg 170 |||||| |||||||||| |||| || || ||||| |||||||||||||||||| |||||| Sbjct: 25120647 tcctggcgctcgccgccacctccctcgcaggcgaccccgacatgctccaggacgtctgcg 25120706 Query: 171 tcgccgattacaaatccctcc 191 ||||||||||||| ||||||| Sbjct: 25120707 tcgccgattacaagtccctcc 25120727 >emb|CT833432.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN007O02, full insert sequence Length = 1034 Score = 222 bits (112), Expect = 2e-54 Identities = 214/248 (86%) Strand = Plus / Plus Query: 355 gacggcggcggacgtggacaagctcccggggctcaataccctgggtgtgtccatggcgcg 414 |||||||||| |||||| | || |||||||| || || |||| |||||||||||||| Sbjct: 498 gacggcggcgagcgtggagagcctgccggggctgaacacgatgggggtgtccatggcgcg 557 Query: 415 gatcgactacgcgccgggggggcttaacccgccgcacacccacccgcgcgctacggagat 474 |||||||||||||| ||||||| ||||| |||||||| ||||| || || || ||||| Sbjct: 558 tatcgactacgcgccatgggggctgaacccaccgcacacgcacccccgtgccaccgagat 617 Query: 475 cgtcttcgtgctcgagggctccctcgacgtcggcttcgtcaccacggccaacaggctctt 534 | ||||||| |||||||||| ||||||||||||||||||||||| ||||||| |||||| Sbjct: 618 catcttcgtcgtcgagggctctctcgacgtcggcttcgtcaccaccgccaacaagctctt 677 Query: 535 cgcccgcaccgtccgcaagggcgaggtgttcgtcttcccccgcggcctcctccacttcca 594 | ||||||||||| ||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 678 cacccgcaccgtctgcaagggggaggtgttcgtcttcccgcgggggctcgtccacttcca 737 Query: 595 gaagaaca 602 |||||||| Sbjct: 738 gaagaaca 745 Score = 111 bits (56), Expect = 6e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 201 tgcggctgaacgggttcccgtgcaagaggccggagaacgtgacggtgaacgacttcttct 260 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 386 tgcggctgaacgggttcccgtgcaagaggatagagaacgtgacggcgaacgacttcttct 445 Query: 261 tcgacgggctga 272 |||||||||||| Sbjct: 446 tcgacgggctga 457 Score = 81.8 bits (41), Expect = 5e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 118 gctcgccgccccctcgctggccggcgatcccgacatgctccaggacatctgcgtcgccga 177 |||||||||| |||| || |||||||| || ||||||||||||||| ||||||||||||| Sbjct: 183 gctcgccgccacctccctcgccggcgacccggacatgctccaggacgtctgcgtcgccga 242 Query: 178 ttacaaatccctc 190 ||||| |||||| Sbjct: 243 ctacaagtccctc 255