BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf003f03 (934 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT834561.1| Oryza sativa (indica cultivar-group) cDNA clone:... 624 e-175 ref|NM_001065175.1| Oryza sativa (japonica cultivar-group) Os06g... 620 e-174 gb|AF541859.1| Oryza sativa (indica cultivar-group) HMG1 protein... 620 e-174 dbj|AK062226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 620 e-174 gb|AF093632.1|AF093632 Oryza sativa high mobility group protein ... 618 e-174 >emb|CT834561.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120M18, full insert sequence Length = 994 Score = 624 bits (315), Expect = e-175 Identities = 449/493 (91%), Gaps = 3/493 (0%) Strand = Plus / Plus Query: 150 cgcaggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagt 209 ||||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||| Sbjct: 211 cgcaggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagt 270 Query: 210 tggcggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccg 269 |||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 271 tggctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccg 330 Query: 270 ggaaggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagt 329 | |||||||||||||||||||||||||||||| ||| |||||||| || |||||||||| Sbjct: 331 gcaaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagt 390 Query: 330 tccgcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaag 389 |||| ||||||||||||||||||||||| |||||||| ||||| |||||||| || |||| Sbjct: 391 tccgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaag 450 Query: 390 cagccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaagg 449 ||||||| || |||||||||||| ||| ||| ||||||||||||||||| |||||||||| Sbjct: 451 cagccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaagg 510 Query: 450 ccaataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagca 509 |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 ccaacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagca 570 Query: 510 ctgccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgaca 569 ||||||||||| || || |||||||||||||||||||| ||||| || |||||||||| Sbjct: 571 ctgccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgaca 627 Query: 570 aatccaagtccgaggtgaatgacgaggacgacgatgagggtagcgaagatgatgaagatg 629 | |||||||||||||| ||||| ||||| ||||| ||||| |||||||| |||||||| | Sbjct: 628 agtccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaagacg 687 Query: 630 atgacgagtgagc 642 ||||||||||||| Sbjct: 688 atgacgagtgagc 700 Score = 214 bits (108), Expect = 5e-52 Identities = 189/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 731 tctaccagaattattcagtttcacttcacatcgtgatgttttactttta---tcgtccta 787 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 782 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 841 Query: 788 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 843 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 842 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 901 Query: 844 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 902 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 902 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 961 Query: 903 ttgcgataaaatcagtttgggtatgttagatt 934 ||| ||||| ||||||||| |||||||||||| Sbjct: 962 ttgtgataatatcagtttgcgtatgttagatt 993 >ref|NM_001065175.1| Oryza sativa (japonica cultivar-group) Os06g0728000 (Os06g0728000) mRNA, complete cds Length = 913 Score = 620 bits (313), Expect = e-174 Identities = 447/491 (91%), Gaps = 3/491 (0%) Strand = Plus / Plus Query: 152 caggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttg 211 ||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 136 caggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttg 195 Query: 212 gcggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggg 271 || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggc 255 Query: 272 aaggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttc 331 |||||||||||||||||||||||||||||| ||| |||||||| || |||||||||||| Sbjct: 256 aaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttc 315 Query: 332 cgcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagca 391 || ||||||||||||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 316 cgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagca 375 Query: 392 gccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcc 451 ||||| || |||||||||||| ||| ||| ||||||||||||||||| |||||||||||| Sbjct: 376 gccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcc 435 Query: 452 aataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcact 511 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 aacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcact 495 Query: 512 gccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaa 571 ||||||||| || || |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 496 gccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaag 552 Query: 572 tccaagtccgaggtgaatgacgaggacgacgatgagggtagcgaagatgatgaagatgat 631 |||||||||||||| ||||| ||||| ||||| ||||| |||||||| |||||||| ||| Sbjct: 553 tccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaagacgat 612 Query: 632 gacgagtgagc 642 ||||||||||| Sbjct: 613 gacgagtgagc 623 Score = 214 bits (108), Expect = 5e-52 Identities = 189/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 731 tctaccagaattattcagtttcacttcacatcgtgatgttttactttta---tcgtccta 787 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 702 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 761 Query: 788 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 843 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 762 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 821 Query: 844 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 902 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 822 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 881 Query: 903 ttgcgataaaatcagtttgggtatgttagatt 934 ||| ||||| ||||||||| |||||||||||| Sbjct: 882 ttgtgataatatcagtttgcgtatgttagatt 913 >gb|AF541859.1| Oryza sativa (indica cultivar-group) HMG1 protein (HMG1) mRNA, complete cds Length = 918 Score = 620 bits (313), Expect = e-174 Identities = 447/491 (91%), Gaps = 3/491 (0%) Strand = Plus / Plus Query: 152 caggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttg 211 ||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 112 caggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttg 171 Query: 212 gcggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggg 271 || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 172 gctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggc 231 Query: 272 aaggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttc 331 |||||||||||||||||||||||||||||| ||| |||||||| || |||||||||||| Sbjct: 232 aaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttc 291 Query: 332 cgcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagca 391 || ||||||||||||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 292 cgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagca 351 Query: 392 gccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcc 451 ||||| || |||||||||||| ||| ||| ||||||||||||||||| |||||||||||| Sbjct: 352 gccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcc 411 Query: 452 aataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcact 511 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 412 aacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcact 471 Query: 512 gccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaa 571 ||||||||| || || |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 472 gccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaag 528 Query: 572 tccaagtccgaggtgaatgacgaggacgacgatgagggtagcgaagatgatgaagatgat 631 |||||||||||||| ||||| ||||| ||||| ||||| |||||||| |||||||| ||| Sbjct: 529 tccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaagacgat 588 Query: 632 gacgagtgagc 642 ||||||||||| Sbjct: 589 gacgagtgagc 599 Score = 214 bits (108), Expect = 5e-52 Identities = 189/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 731 tctaccagaattattcagtttcacttcacatcgtgatgttttactttta---tcgtccta 787 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 678 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 737 Query: 788 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 843 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 738 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 797 Query: 844 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 902 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 798 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 857 Query: 903 ttgcgataaaatcagtttgggtatgttagatt 934 ||| ||||| ||||||||| |||||||||||| Sbjct: 858 ttgtgataatatcagtttgcgtatgttagatt 889 >dbj|AK062226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C12, full insert sequence Length = 913 Score = 620 bits (313), Expect = e-174 Identities = 447/491 (91%), Gaps = 3/491 (0%) Strand = Plus / Plus Query: 152 caggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttg 211 ||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 136 caggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttg 195 Query: 212 gcggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggg 271 || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggc 255 Query: 272 aaggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttc 331 |||||||||||||||||||||||||||||| ||| |||||||| || |||||||||||| Sbjct: 256 aaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttc 315 Query: 332 cgcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagca 391 || ||||||||||||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 316 cgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagca 375 Query: 392 gccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcc 451 ||||| || |||||||||||| ||| ||| ||||||||||||||||| |||||||||||| Sbjct: 376 gccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcc 435 Query: 452 aataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcact 511 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 aacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcact 495 Query: 512 gccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaa 571 ||||||||| || || |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 496 gccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaag 552 Query: 572 tccaagtccgaggtgaatgacgaggacgacgatgagggtagcgaagatgatgaagatgat 631 |||||||||||||| ||||| ||||| ||||| ||||| |||||||| |||||||| ||| Sbjct: 553 tccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaagacgat 612 Query: 632 gacgagtgagc 642 ||||||||||| Sbjct: 613 gacgagtgagc 623 Score = 214 bits (108), Expect = 5e-52 Identities = 189/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 731 tctaccagaattattcagtttcacttcacatcgtgatgttttactttta---tcgtccta 787 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 702 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 761 Query: 788 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 843 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 762 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 821 Query: 844 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 902 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 822 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 881 Query: 903 ttgcgataaaatcagtttgggtatgttagatt 934 ||| ||||| ||||||||| |||||||||||| Sbjct: 882 ttgtgataatatcagtttgcgtatgttagatt 913 >gb|AF093632.1|AF093632 Oryza sativa high mobility group protein (HMG) mRNA, complete cds Length = 869 Score = 618 bits (312), Expect = e-174 Identities = 446/490 (91%), Gaps = 3/490 (0%) Strand = Plus / Plus Query: 153 aggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttgg 212 |||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| Sbjct: 64 aggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttgg 123 Query: 213 cggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggga 272 | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 124 ctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggca 183 Query: 273 aggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttcc 332 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||| Sbjct: 184 aggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttcc 243 Query: 333 gcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagcag 392 | ||||||||||||||||||||||| |||||||| ||||| |||||||| || ||||||| Sbjct: 244 gtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcag 303 Query: 393 ccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcca 452 |||| || |||||||||||| ||| ||| ||||||||||||||||| ||||||||||||| Sbjct: 304 ccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcca 363 Query: 453 ataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcactg 512 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 acaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg 423 Query: 513 ccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaat 572 |||||||| || || |||||||||||||||||||| ||||| || ||||||||||| | Sbjct: 424 ccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 480 Query: 573 ccaagtccgaggtgaatgacgaggacgacgatgagggtagcgaagatgatgaagatgatg 632 ||||||||||||| ||||| ||||| ||||| ||||| |||||||| |||||||| |||| Sbjct: 481 ccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaagacgatg 540 Query: 633 acgagtgagc 642 |||||||||| Sbjct: 541 acgagtgagc 550 Score = 214 bits (108), Expect = 5e-52 Identities = 189/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 731 tctaccagaattattcagtttcacttcacatcgtgatgttttactttta---tcgtccta 787 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 629 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 688 Query: 788 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 843 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 689 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 748 Query: 844 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 902 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 749 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 808 Query: 903 ttgcgataaaatcagtttgggtatgttagatt 934 ||| ||||| ||||||||| |||||||||||| Sbjct: 809 ttgtgataatatcagtttgcgtatgttagatt 840