BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf003b20 (1030 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT832720.1| Oryza sativa (indica cultivar-group) cDNA clone:... 511 e-141 ref|NM_001061609.1| Oryza sativa (japonica cultivar-group) Os05g... 339 1e-89 dbj|AK069275.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 8e-85 gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome... 242 2e-60 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 242 2e-60 >emb|CT832720.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA004H03, full insert sequence Length = 685 Score = 511 bits (258), Expect = e-141 Identities = 387/430 (90%) Strand = Plus / Plus Query: 109 gatggcggaggactcgggcgccatccttcgccacatctcctccctcaaggacatgcttga 168 ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 50 gatggcggaggactccggcgccatcctccgccacatatcctccctcaaggacatgcttga 109 Query: 169 caaggtcaacgaagagattgaacagaatatacaaaagaccagggaaatagagtcagaaat 228 |||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||| Sbjct: 110 caaggtcaacgaagagattgaagagaatattcaaaagacaagggaaatagagtcagaaat 169 Query: 229 agtgaagcattctgaaactgaaaaggactatctcgtgaaggagtctgaactaatgaaagg 288 ||||||||||||||||||||||||||| ||| || |||| |||||||||||||||||||| Sbjct: 170 agtgaagcattctgaaactgaaaaggagtatatcatgaaagagtctgaactaatgaaagg 229 Query: 289 agtatcagttgctgagtttgaactcaatggccttatgcaagtggctgggaaagtttcgtc 348 |||||| ||||||||||||||||||||||| |||| ||||||||||||||| ||| || Sbjct: 230 ggtatcaattgctgagtttgaactcaatggcattatacaagtggctgggaaaagttcatc 289 Query: 349 atcgaatctaaggggtttcaggctaacatgtttggaggtttgaacgaggatttagttcag 408 | |||||||||||||| |||||||||||| |||||| ||||||| |||||||||||| Sbjct: 290 aatgaatctaaggggttccaggctaacatgcttggagatttgaacaaggatttagttctt 349 Query: 409 ttacttaaggaaaaaggttcactagacaatgagagtgagaacttgaaaataaagatcgac 468 ||||||||||| |||||||| |||| |||||||||||||||||||||| |||||| || Sbjct: 350 ttacttaaggagaaaggttcgctaggggatgagagtgagaacttgaaaatgaagatcaac 409 Query: 469 actctaaaaagttcatcaagggaatacattgctgagattcttgaggaggtaaatatggaa 528 | || ||||||| ||| | || ||| ||||||| |||||||||||| ||||||||||| Sbjct: 410 gcaatagaaagttcgtcacgtgattactttgctgacattcttgaggagctaaatatggaa 469 Query: 529 aattcagttt 538 |||||||||| Sbjct: 470 aattcagttt 479 >ref|NM_001061609.1| Oryza sativa (japonica cultivar-group) Os05g0275600 (Os05g0275600) mRNA, complete cds Length = 961 Score = 339 bits (171), Expect = 1e-89 Identities = 213/227 (93%) Strand = Plus / Plus Query: 109 gatggcggaggactcgggcgccatccttcgccacatctcctccctcaaggacatgcttga 168 ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 53 gatggcggaggactccggcgccatcctccgccacatatcctccctcaaggacatgcttga 112 Query: 169 caaggtcaacgaagagattgaacagaatatacaaaagaccagggaaatagagtcagaaat 228 |||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||| Sbjct: 113 caaggtcaacgaagagattgaagagaatattcaaaagacaagggaaatagagtcagaaat 172 Query: 229 agtgaagcattctgaaactgaaaaggactatctcgtgaaggagtctgaactaatgaaagg 288 ||||||||||||||||||||||||||| ||| || |||| |||||||||||||||||||| Sbjct: 173 agtgaagcattctgaaactgaaaaggagtatatcatgaaagagtctgaactaatgaaagg 232 Query: 289 agtatcagttgctgagtttgaactcaatggccttatgcaagtggctg 335 |||||| ||||||||||||||||||||||| |||| |||||||||| Sbjct: 233 ggtatcaattgctgagtttgaactcaatggcattatacaagtggctg 279 Score = 272 bits (137), Expect = 3e-69 Identities = 245/281 (87%) Strand = Plus / Plus Query: 352 gaatctaaggggtttcaggctaacatgtttggaggtttgaacgaggatttagttcagtta 411 |||||||||||||| |||||||||||| |||||| ||||||| |||||||||||| ||| Sbjct: 390 gaatctaaggggttccaggctaacatgcttggagatttgaacaaggatttagttctttta 449 Query: 412 cttaaggaaaaaggttcactagacaatgagagtgagaacttgaaaataaagatcgacact 471 |||||||| |||||||| |||| |||||||||||||||||||||| |||||| || | Sbjct: 450 cttaaggagaaaggttcgctaggggatgagagtgagaacttgaaaatgaagatcaacgca 509 Query: 472 ctaaaaagttcatcaagggaatacattgctgagattcttgaggaggtaaatatggaaaat 531 || ||||||| ||| | || ||| ||||||| |||||||||||| |||||||||||||| Sbjct: 510 atagaaagttcgtcacgtgattactttgctgacattcttgaggagctaaatatggaaaat 569 Query: 532 tcagttttggagtctgagctacagtataggatttcagaatatatggatgttctgaaggat 591 ||||||||||| ||||| ||||||||| |||||||||||| ||||||||| |||||||| Sbjct: 570 tcagttttggaatctgaattacagtataagatttcagaatacatggatgttatgaaggat 629 Query: 592 ataaacaacctgaagattctatttagctcgaccaattctta 632 |||| ||| |||||| ||||||||| |||| ||||||||| Sbjct: 630 ataagcaatctgaaggctctatttagttcgatcaattctta 670 >dbj|AK069275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015J02, full insert sequence Length = 962 Score = 323 bits (163), Expect = 8e-85 Identities = 211/227 (92%) Strand = Plus / Plus Query: 109 gatggcggaggactcgggcgccatccttcgccacatctcctccctcaaggacatgcttga 168 ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 54 gatggcggaggactccggcgccatcctccgccacatatcctccctcaaggacatgcttga 113 Query: 169 caaggtcaacgaagagattgaacagaatatacaaaagaccagggaaatagagtcagaaat 228 |||||||||||||||||||||| ||||||| | |||||| |||||||||||||||||||| Sbjct: 114 caaggtcaacgaagagattgaagagaatattcgaaagacaagggaaatagagtcagaaat 173 Query: 229 agtgaagcattctgaaactgaaaaggactatctcgtgaaggagtctgaactaatgaaagg 288 ||||||||||||||||||||||||||| ||| || |||| ||| |||||||||||||||| Sbjct: 174 agtgaagcattctgaaactgaaaaggagtatatcatgaaagagcctgaactaatgaaagg 233 Query: 289 agtatcagttgctgagtttgaactcaatggccttatgcaagtggctg 335 |||||| ||||||||||||||||||||||| |||| |||||||||| Sbjct: 234 ggtatcaattgctgagtttgaactcaatggcattatacaagtggctg 280 Score = 272 bits (137), Expect = 3e-69 Identities = 245/281 (87%) Strand = Plus / Plus Query: 352 gaatctaaggggtttcaggctaacatgtttggaggtttgaacgaggatttagttcagtta 411 |||||||||||||| |||||||||||| |||||| ||||||| |||||||||||| ||| Sbjct: 391 gaatctaaggggttccaggctaacatgcttggagatttgaacaaggatttagttctttta 450 Query: 412 cttaaggaaaaaggttcactagacaatgagagtgagaacttgaaaataaagatcgacact 471 |||||||| |||||||| |||| |||||||||||||||||||||| |||||| || | Sbjct: 451 cttaaggagaaaggttcgctaggggatgagagtgagaacttgaaaatgaagatcaacgca 510 Query: 472 ctaaaaagttcatcaagggaatacattgctgagattcttgaggaggtaaatatggaaaat 531 || ||||||| ||| | || ||| ||||||| |||||||||||| |||||||||||||| Sbjct: 511 atagaaagttcgtcacgtgattactttgctgacattcttgaggagctaaatatggaaaat 570 Query: 532 tcagttttggagtctgagctacagtataggatttcagaatatatggatgttctgaaggat 591 ||||||||||| ||||| ||||||||| |||||||||||| ||||||||| |||||||| Sbjct: 571 tcagttttggaatctgaattacagtataagatttcagaatacatggatgttatgaaggat 630 Query: 592 ataaacaacctgaagattctatttagctcgaccaattctta 632 |||| ||| |||||| ||||||||| |||| ||||||||| Sbjct: 631 ataagcaatctgaaggctctatttagttcgatcaattctta 671 >gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0018H09, complete sequence Length = 155329 Score = 242 bits (122), Expect = 2e-60 Identities = 155/166 (93%) Strand = Plus / Plus Query: 171 aggtcaacgaagagattgaacagaatatacaaaagaccagggaaatagagtcagaaatag 230 |||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||| Sbjct: 118756 aggtcaacgaagagattgaagagaatattcaaaagacaagggaaatagagtcagaaatag 118815 Query: 231 tgaagcattctgaaactgaaaaggactatctcgtgaaggagtctgaactaatgaaaggag 290 ||||||||||||||||||||||||| ||| || |||| |||||||||||||||||||| | Sbjct: 118816 tgaagcattctgaaactgaaaaggagtatatcatgaaagagtctgaactaatgaaagggg 118875 Query: 291 tatcagttgctgagtttgaactcaatggccttatgcaagtggctgg 336 ||||| ||||||||||||||||||||||| |||| ||||||||||| Sbjct: 118876 tatcaattgctgagtttgaactcaatggcattatacaagtggctgg 118921 Score = 174 bits (88), Expect = 5e-40 Identities = 160/184 (86%) Strand = Plus / Plus Query: 352 gaatctaaggggtttcaggctaacatgtttggaggtttgaacgaggatttagttcagtta 411 |||||||||||||| |||||||||||| |||||| ||||||| |||||||||||| ||| Sbjct: 120512 gaatctaaggggttccaggctaacatgcttggagatttgaacaaggatttagttctttta 120571 Query: 412 cttaaggaaaaaggttcactagacaatgagagtgagaacttgaaaataaagatcgacact 471 |||||||| |||||||| |||| |||||||||||||||||||||| |||||| || | Sbjct: 120572 cttaaggagaaaggttcgctaggggatgagagtgagaacttgaaaatgaagatcaacgca 120631 Query: 472 ctaaaaagttcatcaagggaatacattgctgagattcttgaggaggtaaatatggaaaat 531 || ||||||| ||| | || ||| ||||||| |||||||||||| |||||||||||||| Sbjct: 120632 atagaaagttcgtcacgtgattactttgctgacattcttgaggagctaaatatggaaaat 120691 Query: 532 tcag 535 |||| Sbjct: 120692 tcag 120695 Score = 109 bits (55), Expect = 2e-20 Identities = 64/67 (95%) Strand = Plus / Plus Query: 109 gatggcggaggactcgggcgccatccttcgccacatctcctccctcaaggacatgcttga 168 ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 116339 gatggcggaggactccggcgccatcctccgccacatatcctccctcaaggacatgcttga 116398 Query: 169 caaggtc 175 ||||||| Sbjct: 116399 caaggtc 116405 Score = 103 bits (52), Expect = 1e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 533 cagttttggagtctgagctacagtataggatttcagaatatatggatgttctgaaggata 592 |||||||||| ||||| ||||||||| |||||||||||| ||||||||| ||||||||| Sbjct: 121346 cagttttggaatctgaattacagtataagatttcagaatacatggatgttatgaaggata 121405 Query: 593 taaacaacctgaagattctatttagctcgaccaattctta 632 ||| ||| |||||| ||||||||| |||| ||||||||| Sbjct: 121406 taagcaatctgaaggctctatttagttcgatcaattctta 121445 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 242 bits (122), Expect = 2e-60 Identities = 155/166 (93%) Strand = Plus / Plus Query: 171 aggtcaacgaagagattgaacagaatatacaaaagaccagggaaatagagtcagaaatag 230 |||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||| Sbjct: 11216502 aggtcaacgaagagattgaagagaatattcaaaagacaagggaaatagagtcagaaatag 11216561 Query: 231 tgaagcattctgaaactgaaaaggactatctcgtgaaggagtctgaactaatgaaaggag 290 ||||||||||||||||||||||||| ||| || |||| |||||||||||||||||||| | Sbjct: 11216562 tgaagcattctgaaactgaaaaggagtatatcatgaaagagtctgaactaatgaaagggg 11216621 Query: 291 tatcagttgctgagtttgaactcaatggccttatgcaagtggctgg 336 ||||| ||||||||||||||||||||||| |||| ||||||||||| Sbjct: 11216622 tatcaattgctgagtttgaactcaatggcattatacaagtggctgg 11216667 Score = 174 bits (88), Expect = 5e-40 Identities = 160/184 (86%) Strand = Plus / Plus Query: 352 gaatctaaggggtttcaggctaacatgtttggaggtttgaacgaggatttagttcagtta 411 |||||||||||||| |||||||||||| |||||| ||||||| |||||||||||| ||| Sbjct: 11218258 gaatctaaggggttccaggctaacatgcttggagatttgaacaaggatttagttctttta 11218317 Query: 412 cttaaggaaaaaggttcactagacaatgagagtgagaacttgaaaataaagatcgacact 471 |||||||| |||||||| |||| |||||||||||||||||||||| |||||| || | Sbjct: 11218318 cttaaggagaaaggttcgctaggggatgagagtgagaacttgaaaatgaagatcaacgca 11218377 Query: 472 ctaaaaagttcatcaagggaatacattgctgagattcttgaggaggtaaatatggaaaat 531 || ||||||| ||| | || ||| ||||||| |||||||||||| |||||||||||||| Sbjct: 11218378 atagaaagttcgtcacgtgattactttgctgacattcttgaggagctaaatatggaaaat 11218437 Query: 532 tcag 535 |||| Sbjct: 11218438 tcag 11218441 Score = 109 bits (55), Expect = 2e-20 Identities = 64/67 (95%) Strand = Plus / Plus Query: 109 gatggcggaggactcgggcgccatccttcgccacatctcctccctcaaggacatgcttga 168 ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 11214085 gatggcggaggactccggcgccatcctccgccacatatcctccctcaaggacatgcttga 11214144 Query: 169 caaggtc 175 ||||||| Sbjct: 11214145 caaggtc 11214151 Score = 103 bits (52), Expect = 1e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 533 cagttttggagtctgagctacagtataggatttcagaatatatggatgttctgaaggata 592 |||||||||| ||||| ||||||||| |||||||||||| ||||||||| ||||||||| Sbjct: 11219092 cagttttggaatctgaattacagtataagatttcagaatacatggatgttatgaaggata 11219151 Query: 593 taaacaacctgaagattctatttagctcgaccaattctta 632 ||| ||| |||||| ||||||||| |||| ||||||||| Sbjct: 11219152 taagcaatctgaaggctctatttagttcgatcaattctta 11219191