BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf002o24 (683 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT829265.1| Oryza sativa (indica cultivar-group) cDNA clone:... 283 5e-73 ref|NM_001049148.1| Oryza sativa (japonica cultivar-group) Os01g... 283 5e-73 dbj|AK058837.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 5e-73 dbj|AB111915.1| Oryza sativa (japonica cultivar-group) OsRPA14 m... 272 2e-69 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 200 5e-48 >emb|CT829265.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN090L21, full insert sequence Length = 702 Score = 283 bits (143), Expect = 5e-73 Identities = 302/355 (85%) Strand = Plus / Plus Query: 43 cgaagcggagatggatacgtcgggcccttcagcattcgtcaatggagagattctgaacat 102 |||||| ||||||||||| || || ||| |||||||||||||||||||||||||||| || Sbjct: 124 cgaagcagagatggatacatcaggacctgcagcattcgtcaatggagagattctgaagat 183 Query: 103 gtttgttgggcgaagagtgcgcacagtggttcaagtccaacgcgatgaaggtggagtgct 162 ||| || || |||||||||||||| ||||| |||| ||| ||||| ||||| || |||| Sbjct: 184 gttcgtcggccgaagagtgcgcacggtggtccaagcccagcgcgaggaaggcgggttgct 243 Query: 163 tgttgggcagtccactgatggccatcagttaaccatcagaggtgccttgggtgcccctgc 222 | | ||||||||||| ||||| |||||| ||||||||| ||| |||| ||||||||| Sbjct: 244 tatcgggcagtccaccgatggtcatcagctaaccatcaaaggggcctccggtgcccctat 303 Query: 223 atcacactatatggaggttattgggatcgctgacagcaaccagtccatccgtgctgaagt 282 || |||||| ||||| |||||||||||||||| ||| ||| ||||||| |||||||| Sbjct: 304 gtcgcactatgtggagattattgggatcgctgaacccaatcaggccatccgggctgaagt 363 Query: 283 ttgcactgattttggcgaaaactttgatcctgtggcattcaatgggctgtgcaagcttgc 342 |||||| |||||||| |||||||| ||||||| |||||||||| |||||||||||||| Sbjct: 364 ttgcacagattttggtgaaaacttcgatcctgcaccattcaatggactgtgcaagcttgc 423 Query: 343 aaacggccaggtgaagaatttgttcctgtagaggtcagcgtctcatagaagacat 397 || |||||| ||||| ||||||||||||||||||| || || |||| ||||||| Sbjct: 424 gaatggccagatgaaggatttgttcctgtagaggtcggcatcacatacaagacat 478 >ref|NM_001049148.1| Oryza sativa (japonica cultivar-group) Os01g0253600 (Os01g0253600) mRNA, complete cds Length = 726 Score = 283 bits (143), Expect = 5e-73 Identities = 302/355 (85%) Strand = Plus / Plus Query: 43 cgaagcggagatggatacgtcgggcccttcagcattcgtcaatggagagattctgaacat 102 |||||| ||||||||||| || || ||| |||||||||||||||||||||||||||| || Sbjct: 99 cgaagcagagatggatacatcaggacctgcagcattcgtcaatggagagattctgaagat 158 Query: 103 gtttgttgggcgaagagtgcgcacagtggttcaagtccaacgcgatgaaggtggagtgct 162 ||| || || |||||||||||||| ||||| |||| ||| ||||| ||||| || |||| Sbjct: 159 gttcgtcggccgaagagtgcgcacggtggtccaagcccagcgcgaggaaggcgggttgct 218 Query: 163 tgttgggcagtccactgatggccatcagttaaccatcagaggtgccttgggtgcccctgc 222 | | ||||||||||| ||||| |||||| ||||||||| ||| |||| ||||||||| Sbjct: 219 tatcgggcagtccaccgatggtcatcagctaaccatcaaaggggcctccggtgcccctat 278 Query: 223 atcacactatatggaggttattgggatcgctgacagcaaccagtccatccgtgctgaagt 282 || |||||| ||||| |||||||||||||||| ||| ||| ||||||| |||||||| Sbjct: 279 gtcgcactatgtggagattattgggatcgctgaacccaatcaggccatccgggctgaagt 338 Query: 283 ttgcactgattttggcgaaaactttgatcctgtggcattcaatgggctgtgcaagcttgc 342 |||||| |||||||| |||||||| ||||||| |||||||||| |||||||||||||| Sbjct: 339 ttgcacagattttggtgaaaacttcgatcctgcaccattcaatggactgtgcaagcttgc 398 Query: 343 aaacggccaggtgaagaatttgttcctgtagaggtcagcgtctcatagaagacat 397 || |||||| ||||| ||||||||||||||||||| || || |||| ||||||| Sbjct: 399 gaatggccagatgaaggatttgttcctgtagaggtcggcatcacatacaagacat 453 >dbj|AK058837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-D02, full insert sequence Length = 726 Score = 283 bits (143), Expect = 5e-73 Identities = 302/355 (85%) Strand = Plus / Plus Query: 43 cgaagcggagatggatacgtcgggcccttcagcattcgtcaatggagagattctgaacat 102 |||||| ||||||||||| || || ||| |||||||||||||||||||||||||||| || Sbjct: 99 cgaagcagagatggatacatcaggacctgcagcattcgtcaatggagagattctgaagat 158 Query: 103 gtttgttgggcgaagagtgcgcacagtggttcaagtccaacgcgatgaaggtggagtgct 162 ||| || || |||||||||||||| ||||| |||| ||| ||||| ||||| || |||| Sbjct: 159 gttcgtcggccgaagagtgcgcacggtggtccaagcccagcgcgaggaaggcgggttgct 218 Query: 163 tgttgggcagtccactgatggccatcagttaaccatcagaggtgccttgggtgcccctgc 222 | | ||||||||||| ||||| |||||| ||||||||| ||| |||| ||||||||| Sbjct: 219 tatcgggcagtccaccgatggtcatcagctaaccatcaaaggggcctccggtgcccctat 278 Query: 223 atcacactatatggaggttattgggatcgctgacagcaaccagtccatccgtgctgaagt 282 || |||||| ||||| |||||||||||||||| ||| ||| ||||||| |||||||| Sbjct: 279 gtcgcactatgtggagattattgggatcgctgaacccaatcaggccatccgggctgaagt 338 Query: 283 ttgcactgattttggcgaaaactttgatcctgtggcattcaatgggctgtgcaagcttgc 342 |||||| |||||||| |||||||| ||||||| |||||||||| |||||||||||||| Sbjct: 339 ttgcacagattttggtgaaaacttcgatcctgcaccattcaatggactgtgcaagcttgc 398 Query: 343 aaacggccaggtgaagaatttgttcctgtagaggtcagcgtctcatagaagacat 397 || |||||| ||||| ||||||||||||||||||| || || |||| ||||||| Sbjct: 399 gaatggccagatgaaggatttgttcctgtagaggtcggcatcacatacaagacat 453 >dbj|AB111915.1| Oryza sativa (japonica cultivar-group) OsRPA14 mRNA for replication protein A 14kDa, complete cds Length = 689 Score = 272 bits (137), Expect = 2e-69 Identities = 293/345 (84%) Strand = Plus / Plus Query: 53 atggatacgtcgggcccttcagcattcgtcaatggagagattctgaacatgtttgttggg 112 |||||||| || || ||| |||||||||||||||||||||||||||| ||||| || || Sbjct: 6 atggatacatcaggacctgcagcattcgtcaatggagagattctgaagatgttcgtcggc 65 Query: 113 cgaagagtgcgcacagtggttcaagtccaacgcgatgaaggtggagtgcttgttgggcag 172 |||||||||||||| ||||| |||| ||| ||||| ||||| || ||||| | |||||| Sbjct: 66 cgaagagtgcgcacggtggtccaagcccagcgcgaggaaggcgggttgcttatcgggcag 125 Query: 173 tccactgatggccatcagttaaccatcagaggtgccttgggtgcccctgcatcacactat 232 ||||| ||||| |||||| ||||||||| ||| |||| ||||||||| || |||||| Sbjct: 126 tccaccgatggtcatcagctaaccatcaaaggggcctccggtgcccctatgtcgcactat 185 Query: 233 atggaggttattgggatcgctgacagcaaccagtccatccgtgctgaagtttgcactgat 292 ||||| |||||||||||||||| ||| ||| ||||||| |||||||||||||| ||| Sbjct: 186 gtggagattattgggatcgctgaacccaatcaggccatccgggctgaagtttgcacagat 245 Query: 293 tttggcgaaaactttgatcctgtggcattcaatgggctgtgcaagcttgcaaacggccag 352 ||||| |||||||| ||||||| |||||||||| |||||||||||||| || |||||| Sbjct: 246 tttggtgaaaacttcgatcctgcaccattcaatggactgtgcaagcttgcgaatggccag 305 Query: 353 gtgaagaatttgttcctgtagaggtcagcgtctcatagaagacat 397 ||||| ||||||||||||||||||| || || |||| ||||||| Sbjct: 306 atgaaggatttgttcctgtagaggtcggcatcacatacaagacat 350 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 200 bits (101), Expect = 5e-48 Identities = 218/257 (84%) Strand = Plus / Minus Query: 50 gagatggatacgtcgggcccttcagcattcgtcaatggagagattctgaacatgtttgtt 109 ||||||||||| || || ||| |||||||||||||||||||||||||||| ||||| || Sbjct: 8397031 gagatggatacatcaggacctgcagcattcgtcaatggagagattctgaagatgttcgtc 8396972 Query: 110 gggcgaagagtgcgcacagtggttcaagtccaacgcgatgaaggtggagtgcttgttggg 169 || |||||||||||||| ||||| |||| ||| ||||| ||||| || ||||| | ||| Sbjct: 8396971 ggccgaagagtgcgcacggtggtccaagcccagcgcgaggaaggcgggttgcttatcggg 8396912 Query: 170 cagtccactgatggccatcagttaaccatcagaggtgccttgggtgcccctgcatcacac 229 |||||||| ||||| |||||| ||||||||| ||| |||| ||||||||| || ||| Sbjct: 8396911 cagtccaccgatggtcatcagctaaccatcaaaggggcctccggtgcccctatgtcgcac 8396852 Query: 230 tatatggaggttattgggatcgctgacagcaaccagtccatccgtgctgaagtttgcact 289 ||| ||||| |||||||||||||||| ||| ||| ||||||| |||||||||||||| Sbjct: 8396851 tatgtggagattattgggatcgctgaacccaatcaggccatccgggctgaagtttgcaca 8396792 Query: 290 gattttggcgaaaactt 306 |||||||| |||||||| Sbjct: 8396791 gattttggtgaaaactt 8396775 Score = 87.7 bits (44), Expect = 5e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 318 cattcaatgggctgtgcaagcttgcaaacggccaggtgaagaatttgttcctgtagaggt 377 |||||||||| |||||||||||||| || |||||| ||||| |||||||||||||||||| Sbjct: 8395903 cattcaatggactgtgcaagcttgcgaatggccagatgaaggatttgttcctgtagaggt 8395844 Query: 378 cagcgtctcatagaagacat 397 | || || |||| ||||||| Sbjct: 8395843 cggcatcacatacaagacat 8395824