BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf002m19 (817 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AF093632.1|AF093632 Oryza sativa high mobility group protein ... 565 e-157 emb|CT834561.1| Oryza sativa (indica cultivar-group) cDNA clone:... 559 e-156 ref|NM_001065175.1| Oryza sativa (japonica cultivar-group) Os06g... 559 e-156 gb|AF541859.1| Oryza sativa (indica cultivar-group) HMG1 protein... 559 e-156 dbj|AK062226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 559 e-156 >gb|AF093632.1|AF093632 Oryza sativa high mobility group protein (HMG) mRNA, complete cds Length = 869 Score = 565 bits (285), Expect = e-157 Identities = 401/439 (91%), Gaps = 3/439 (0%) Strand = Plus / Plus Query: 65 ccagctgaggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgcc 124 |||| |||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 57 ccaggtgaggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgcc 116 Query: 125 aagttggcggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaag 184 |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 117 aagttggctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaag 176 Query: 185 gccgggaaggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggag 244 ||||| |||||||||||||||||||||||||||||| ||| |||||||| || |||||| Sbjct: 177 gccggcaaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggag 236 Query: 245 gagttccgcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtgggg 304 |||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||| || Sbjct: 237 gagttccgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtagga 296 Query: 305 aaagcagccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagcc 364 ||||||||||| || |||||||||||| ||| ||| ||||||||||||||||| |||||| Sbjct: 297 aaagcagccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagcc 356 Query: 365 aaggccaataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgag 424 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 357 aaggccaacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgag 416 Query: 425 agcactgccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatct 484 ||||||||||||||| || || |||||||||||||||||||| ||||| || |||||| Sbjct: 417 agcactgccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatct 473 Query: 485 gacaaatccaagtccgagg 503 ||||| ||||||||||||| Sbjct: 474 gacaagtccaagtccgagg 492 Score = 222 bits (112), Expect = 2e-54 Identities = 190/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 614 tctaccagaattattcagtttcacttcacatcgtgatgttttactttta---tcgtccta 670 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 629 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 688 Query: 671 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 726 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 689 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 748 Query: 727 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 785 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 749 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 808 Query: 786 ttgcgataatatcagtttgggtatgttagatt 817 ||| ||||||||||||||| |||||||||||| Sbjct: 809 ttgtgataatatcagtttgcgtatgttagatt 840 >emb|CT834561.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120M18, full insert sequence Length = 994 Score = 559 bits (282), Expect = e-156 Identities = 395/432 (91%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 72 aggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttgg 131 |||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| Sbjct: 214 aggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttgg 273 Query: 132 cggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggga 191 | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 274 ctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggca 333 Query: 192 aggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttcc 251 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||| Sbjct: 334 aggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttcc 393 Query: 252 gcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagcag 311 | ||||||||||||||||||||||| |||||||| ||||| |||||||| || ||||||| Sbjct: 394 gtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcag 453 Query: 312 ccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcca 371 |||| || |||||||||||| ||| ||| ||||||||||||||||| ||||||||||||| Sbjct: 454 ccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcca 513 Query: 372 ataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcactg 431 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 acaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg 573 Query: 432 ccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaat 491 |||||||| || || |||||||||||||||||||| ||||| || ||||||||||| | Sbjct: 574 ccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 630 Query: 492 ccaagtccgagg 503 |||||||||||| Sbjct: 631 ccaagtccgagg 642 Score = 222 bits (112), Expect = 2e-54 Identities = 190/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 614 tctaccagaattattcagtttcacttcacatcgtgatgttttactttta---tcgtccta 670 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 782 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 841 Query: 671 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 726 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 842 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 901 Query: 727 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 785 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 902 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 961 Query: 786 ttgcgataatatcagtttgggtatgttagatt 817 ||| ||||||||||||||| |||||||||||| Sbjct: 962 ttgtgataatatcagtttgcgtatgttagatt 993 >ref|NM_001065175.1| Oryza sativa (japonica cultivar-group) Os06g0728000 (Os06g0728000) mRNA, complete cds Length = 913 Score = 559 bits (282), Expect = e-156 Identities = 395/432 (91%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 72 aggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttgg 131 |||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| Sbjct: 137 aggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttgg 196 Query: 132 cggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggga 191 | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 197 ctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggca 256 Query: 192 aggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttcc 251 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||| Sbjct: 257 aggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttcc 316 Query: 252 gcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagcag 311 | ||||||||||||||||||||||| |||||||| ||||| |||||||| || ||||||| Sbjct: 317 gtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcag 376 Query: 312 ccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcca 371 |||| || |||||||||||| ||| ||| ||||||||||||||||| ||||||||||||| Sbjct: 377 ccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcca 436 Query: 372 ataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcactg 431 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 acaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg 496 Query: 432 ccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaat 491 |||||||| || || |||||||||||||||||||| ||||| || ||||||||||| | Sbjct: 497 ccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 553 Query: 492 ccaagtccgagg 503 |||||||||||| Sbjct: 554 ccaagtccgagg 565 Score = 222 bits (112), Expect = 2e-54 Identities = 190/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 614 tctaccagaattattcagtttcacttcacatcgtgatgttttactttta---tcgtccta 670 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 702 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 761 Query: 671 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 726 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 762 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 821 Query: 727 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 785 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 822 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 881 Query: 786 ttgcgataatatcagtttgggtatgttagatt 817 ||| ||||||||||||||| |||||||||||| Sbjct: 882 ttgtgataatatcagtttgcgtatgttagatt 913 >gb|AF541859.1| Oryza sativa (indica cultivar-group) HMG1 protein (HMG1) mRNA, complete cds Length = 918 Score = 559 bits (282), Expect = e-156 Identities = 395/432 (91%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 72 aggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttgg 131 |||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| Sbjct: 113 aggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttgg 172 Query: 132 cggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggga 191 | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 173 ctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggca 232 Query: 192 aggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttcc 251 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||| Sbjct: 233 aggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttcc 292 Query: 252 gcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagcag 311 | ||||||||||||||||||||||| |||||||| ||||| |||||||| || ||||||| Sbjct: 293 gtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcag 352 Query: 312 ccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcca 371 |||| || |||||||||||| ||| ||| ||||||||||||||||| ||||||||||||| Sbjct: 353 ccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcca 412 Query: 372 ataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcactg 431 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 acaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg 472 Query: 432 ccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaat 491 |||||||| || || |||||||||||||||||||| ||||| || ||||||||||| | Sbjct: 473 ccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 529 Query: 492 ccaagtccgagg 503 |||||||||||| Sbjct: 530 ccaagtccgagg 541 Score = 222 bits (112), Expect = 2e-54 Identities = 190/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 614 tctaccagaattattcagtttcacttcacatcgtgatgttttactttta---tcgtccta 670 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 678 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 737 Query: 671 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 726 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 738 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 797 Query: 727 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 785 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 798 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 857 Query: 786 ttgcgataatatcagtttgggtatgttagatt 817 ||| ||||||||||||||| |||||||||||| Sbjct: 858 ttgtgataatatcagtttgcgtatgttagatt 889 >dbj|AK062226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C12, full insert sequence Length = 913 Score = 559 bits (282), Expect = e-156 Identities = 395/432 (91%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 72 aggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttgg 131 |||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| Sbjct: 137 aggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttgg 196 Query: 132 cggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggga 191 | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 197 ctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggca 256 Query: 192 aggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttcc 251 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||| Sbjct: 257 aggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttcc 316 Query: 252 gcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagcag 311 | ||||||||||||||||||||||| |||||||| ||||| |||||||| || ||||||| Sbjct: 317 gtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcag 376 Query: 312 ccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcca 371 |||| || |||||||||||| ||| ||| ||||||||||||||||| ||||||||||||| Sbjct: 377 ccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcca 436 Query: 372 ataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcactg 431 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 acaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg 496 Query: 432 ccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaat 491 |||||||| || || |||||||||||||||||||| ||||| || ||||||||||| | Sbjct: 497 ccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 553 Query: 492 ccaagtccgagg 503 |||||||||||| Sbjct: 554 ccaagtccgagg 565 Score = 222 bits (112), Expect = 2e-54 Identities = 190/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 614 tctaccagaattattcagtttcacttcacatcgtgatgttttactttta---tcgtccta 670 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 702 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 761 Query: 671 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 726 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 762 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 821 Query: 727 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 785 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 822 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 881 Query: 786 ttgcgataatatcagtttgggtatgttagatt 817 ||| ||||||||||||||| |||||||||||| Sbjct: 882 ttgtgataatatcagtttgcgtatgttagatt 913