BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf002d16 (707 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ246195.1| Zea mays clone 16336 mRNA sequence 529 e-147 emb|CT829122.1| Oryza sativa (indica cultivar-group) cDNA clone:... 519 e-144 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 519 e-144 dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic D... 519 e-144 dbj|AB022674.1| Oryza sativa (japonica cultivar-group) rpl12-2 g... 519 e-144 >gb|DQ246195.1| Zea mays clone 16336 mRNA sequence Length = 948 Score = 529 bits (267), Expect = e-147 Identities = 417/467 (89%) Strand = Plus / Plus Query: 174 gccgccgcgccgtcgccgtcgcctccaccgccaccgagtccccgaaggtcctggagctgg 233 |||||||||||||||||||||| | |||||||||||||||||| ||| |||||||||| | Sbjct: 199 gccgccgcgccgtcgccgtcgcgtgcaccgccaccgagtcccccaagatcctggagctcg 258 Query: 234 gcgacgccatcgccgggctcaccctcgaagaggcgcgaagcctcgtagaccacctccagg 293 | |||||||||||||||||||| ||||| ||||| || |||||||| ||||||||||||| Sbjct: 259 gggacgccatcgccgggctcacgctcgaggaggcccgcagcctcgtcgaccacctccagg 318 Query: 294 accgcctcggcgtctccgcggctgccttcgcgccagccgccgtcgtcgcggcgcccggcg 353 | || ||||||||| |||| || ||||||||||| ||||||||||||||||||||||| | Sbjct: 319 agcggctcggcgtcaccgccgcggccttcgcgccggccgccgtcgtcgcggcgcccgggg 378 Query: 354 ctgccgcggcgggcgccgccgaggaggcggccccggccgagaagacggagttcgacgtgg 413 | | || | || ||| |||||||||| |||||| | |||||||||||||||||||||| Sbjct: 379 cgggcggcggggccgcggccgaggaggaggcccccgtcgagaagacggagttcgacgtga 438 Query: 414 tcatcgaggaggtgcccagcagcgcgcgtatcgcgaccatcaaggtggtgcgcgcgctca 473 | ||||| |||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 439 tgatcgaagaggtgcccagcagcgcgcgtatcgccactatcaaggtggtgcgcgcgctca 498 Query: 474 ccagcctcgcgctgaaggaggccaaggacctcatcgaggggctccctaagaagcttaagg 533 ||||||||||||| ||||||||||||||||| |||||||| ||||| |||||| | || | Sbjct: 499 ccagcctcgcgctcaaggaggccaaggaccttatcgagggtctccccaagaaggtcaaag 558 Query: 534 aggccgtgagcaaggacgaggcagaggatgccaagaagcagctcgaggaggtcggcgcca 593 ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 559 aggccgtcagcaaggacgaggccgaggacgccaagaagcagctcgaggaggtcggcgcca 618 Query: 594 aggtgtccatcgcgtaactctaggtatattaggactccttttatttt 640 ||||||| ||||||| || ||||||||| || ||||||||| |||| Sbjct: 619 aggtgtctatcgcgtgacactaggtatacgagtactccttttttttt 665 >emb|CT829122.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN013N05, full insert sequence Length = 827 Score = 519 bits (262), Expect = e-144 Identities = 412/460 (89%), Gaps = 4/460 (0%) Strand = Plus / Plus Query: 176 cgccgcgccgtcgccgtcg---cctccaccgccaccgagtccccgaaggtcctggagctg 232 ||||||||||||||||| | | |||||||||||||||||||| |||||||||||||| Sbjct: 197 cgccgcgccgtcgccgtggtggcgtccaccgccaccgagtcccccaaggtcctggagctc 256 Query: 233 ggcgacgccatcgccgggctcaccctcgaagaggcgcgaagcctcgtagaccacctccag 292 || ||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||| Sbjct: 257 ggggacgccatcgcggggctcaccctcgaggaggcgcggggcctcgtggaccacctccag 316 Query: 293 gaccgcctcggcgtctccgcggctgccttcgcgccagccgccgtcgtcgcggcgcccggc 352 || ||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||| Sbjct: 317 gagcgcctcggcgtctccgccgccgccttcgcgcccgccgccgtcgtcgccgcgcccggc 376 Query: 353 gctgccgcggcgggcgccgccgaggaggcggccccggccgagaagacggagttcgacgtg 412 || | || ||||||||||||| || | |||||| |||||||||||||||||||||||| Sbjct: 377 gcgggcggcgcgggcgccgccgccgacgaggcccccgccgagaagacggagttcgacgtg 436 Query: 413 gtcatcgaggaggtgcccagcagcgcgcgtatcgcgaccatcaaggtggtgcgcgcgctc 472 |||||||||||||| |||||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 437 gtcatcgaggaggttcccagcagcgcgcgcatcgccagcatcaaggtggtgcgcgcgctc 496 Query: 473 accagcctcgcgctgaaggaggccaaggacctcatcgaggggctccctaagaagcttaag 532 |||| ||| || || |||||||||||||||||||||||||| ||||| |||||| | ||| Sbjct: 497 accaacctggccctcaaggaggccaaggacctcatcgagggcctccccaagaaggtcaag 556 Query: 533 gaggccgtgagcaaggacgaggcagaggatgccaagaagcagctcgaggaggtcggcgcc 592 |||| || |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 557 gagggtgtcagcaaggacgaggccgaggatgccaagaagcagctcgaggaggtcggcgcc 616 Query: 593 aaggtgtccatcgcgtaactctaggt-atattaggactcc 631 ||||||||||| |||| || |||||| || |||||||||| Sbjct: 617 aaggtgtccattgcgtgacactaggtaattttaggactcc 656 Score = 93.7 bits (47), Expect = 9e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 69 ccatggcttccaccacgctctcccccgccttctccctcctctcgctcccctcctcctcc 127 |||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 75 ccatggcttccaccgcgctctcctccgccttctccctcctctccctcccctcctcctcc 133 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 519 bits (262), Expect = e-144 Identities = 412/460 (89%), Gaps = 4/460 (0%) Strand = Plus / Plus Query: 176 cgccgcgccgtcgccgtcg---cctccaccgccaccgagtccccgaaggtcctggagctg 232 ||||||||||||||||| | | |||||||||||||||||||| |||||||||||||| Sbjct: 27035253 cgccgcgccgtcgccgtggtggcgtccaccgccaccgagtcccccaaggtcctggagctc 27035312 Query: 233 ggcgacgccatcgccgggctcaccctcgaagaggcgcgaagcctcgtagaccacctccag 292 || ||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||| Sbjct: 27035313 ggggacgccatcgcggggctcaccctcgaggaggcgcggggcctcgtggaccacctccag 27035372 Query: 293 gaccgcctcggcgtctccgcggctgccttcgcgccagccgccgtcgtcgcggcgcccggc 352 || ||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||| Sbjct: 27035373 gagcgcctcggcgtctccgccgccgccttcgcgcccgccgccgtcgtcgccgcgcccggc 27035432 Query: 353 gctgccgcggcgggcgccgccgaggaggcggccccggccgagaagacggagttcgacgtg 412 || | || ||||||||||||| || | |||||| |||||||||||||||||||||||| Sbjct: 27035433 gcgggcggcgcgggcgccgccgccgacgaggcccccgccgagaagacggagttcgacgtg 27035492 Query: 413 gtcatcgaggaggtgcccagcagcgcgcgtatcgcgaccatcaaggtggtgcgcgcgctc 472 |||||||||||||| |||||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 27035493 gtcatcgaggaggttcccagcagcgcgcgcatcgccagcatcaaggtggtgcgcgcgctc 27035552 Query: 473 accagcctcgcgctgaaggaggccaaggacctcatcgaggggctccctaagaagcttaag 532 |||| ||| || || |||||||||||||||||||||||||| ||||| |||||| | ||| Sbjct: 27035553 accaacctggccctcaaggaggccaaggacctcatcgagggcctccccaagaaggtcaag 27035612 Query: 533 gaggccgtgagcaaggacgaggcagaggatgccaagaagcagctcgaggaggtcggcgcc 592 |||| || |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 27035613 gagggtgtcagcaaggacgaggccgaggatgccaagaagcagctcgaggaggtcggcgcc 27035672 Query: 593 aaggtgtccatcgcgtaactctaggt-atattaggactcc 631 ||||||||||| |||| || |||||| || |||||||||| Sbjct: 27035673 aaggtgtccattgcgtgacactaggtaattttaggactcc 27035712 Score = 93.7 bits (47), Expect = 9e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 69 ccatggcttccaccacgctctcccccgccttctccctcctctcgctcccctcctcctcc 127 |||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 27035131 ccatggcttccaccgcgctctcctccgccttctccctcctctccctcccctcctcctcc 27035189 >dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671D01 Length = 163006 Score = 519 bits (262), Expect = e-144 Identities = 412/460 (89%), Gaps = 4/460 (0%) Strand = Plus / Plus Query: 176 cgccgcgccgtcgccgtcg---cctccaccgccaccgagtccccgaaggtcctggagctg 232 ||||||||||||||||| | | |||||||||||||||||||| |||||||||||||| Sbjct: 94084 cgccgcgccgtcgccgtggtggcgtccaccgccaccgagtcccccaaggtcctggagctc 94143 Query: 233 ggcgacgccatcgccgggctcaccctcgaagaggcgcgaagcctcgtagaccacctccag 292 || ||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||| Sbjct: 94144 ggggacgccatcgcggggctcaccctcgaggaggcgcggggcctcgtggaccacctccag 94203 Query: 293 gaccgcctcggcgtctccgcggctgccttcgcgccagccgccgtcgtcgcggcgcccggc 352 || ||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||| Sbjct: 94204 gagcgcctcggcgtctccgccgccgccttcgcgcccgccgccgtcgtcgccgcgcccggc 94263 Query: 353 gctgccgcggcgggcgccgccgaggaggcggccccggccgagaagacggagttcgacgtg 412 || | || ||||||||||||| || | |||||| |||||||||||||||||||||||| Sbjct: 94264 gcgggcggcgcgggcgccgccgccgacgaggcccccgccgagaagacggagttcgacgtg 94323 Query: 413 gtcatcgaggaggtgcccagcagcgcgcgtatcgcgaccatcaaggtggtgcgcgcgctc 472 |||||||||||||| |||||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 94324 gtcatcgaggaggttcccagcagcgcgcgcatcgccagcatcaaggtggtgcgcgcgctc 94383 Query: 473 accagcctcgcgctgaaggaggccaaggacctcatcgaggggctccctaagaagcttaag 532 |||| ||| || || |||||||||||||||||||||||||| ||||| |||||| | ||| Sbjct: 94384 accaacctggccctcaaggaggccaaggacctcatcgagggcctccccaagaaggtcaag 94443 Query: 533 gaggccgtgagcaaggacgaggcagaggatgccaagaagcagctcgaggaggtcggcgcc 592 |||| || |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 94444 gagggtgtcagcaaggacgaggccgaggatgccaagaagcagctcgaggaggtcggcgcc 94503 Query: 593 aaggtgtccatcgcgtaactctaggt-atattaggactcc 631 ||||||||||| |||| || |||||| || |||||||||| Sbjct: 94504 aaggtgtccattgcgtgacactaggtaattttaggactcc 94543 Score = 93.7 bits (47), Expect = 9e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 69 ccatggcttccaccacgctctcccccgccttctccctcctctcgctcccctcctcctcc 127 |||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 93962 ccatggcttccaccgcgctctcctccgccttctccctcctctccctcccctcctcctcc 94020 >dbj|AB022674.1| Oryza sativa (japonica cultivar-group) rpl12-2 gene for chloroplast ribosomal protein L12, complete cds Length = 2075 Score = 519 bits (262), Expect = e-144 Identities = 412/460 (89%), Gaps = 4/460 (0%) Strand = Plus / Plus Query: 176 cgccgcgccgtcgccgtcg---cctccaccgccaccgagtccccgaaggtcctggagctg 232 ||||||||||||||||| | | |||||||||||||||||||| |||||||||||||| Sbjct: 1299 cgccgcgccgtcgccgtggtggcgtccaccgccaccgagtcccccaaggtcctggagctc 1358 Query: 233 ggcgacgccatcgccgggctcaccctcgaagaggcgcgaagcctcgtagaccacctccag 292 || ||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||| Sbjct: 1359 ggggacgccatcgcggggctcaccctcgaggaggcgcggggcctcgtggaccacctccag 1418 Query: 293 gaccgcctcggcgtctccgcggctgccttcgcgccagccgccgtcgtcgcggcgcccggc 352 || ||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||| Sbjct: 1419 gagcgcctcggcgtctccgccgccgccttcgcgcccgccgccgtcgtcgccgcgcccggc 1478 Query: 353 gctgccgcggcgggcgccgccgaggaggcggccccggccgagaagacggagttcgacgtg 412 || | || ||||||||||||| || | |||||| |||||||||||||||||||||||| Sbjct: 1479 gcgggcggcgcgggcgccgccgccgacgaggcccccgccgagaagacggagttcgacgtg 1538 Query: 413 gtcatcgaggaggtgcccagcagcgcgcgtatcgcgaccatcaaggtggtgcgcgcgctc 472 |||||||||||||| |||||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 1539 gtcatcgaggaggttcccagcagcgcgcgcatcgccagcatcaaggtggtgcgcgcgctc 1598 Query: 473 accagcctcgcgctgaaggaggccaaggacctcatcgaggggctccctaagaagcttaag 532 |||| ||| || || |||||||||||||||||||||||||| ||||| |||||| | ||| Sbjct: 1599 accaacctggccctcaaggaggccaaggacctcatcgagggcctccccaagaaggtcaag 1658 Query: 533 gaggccgtgagcaaggacgaggcagaggatgccaagaagcagctcgaggaggtcggcgcc 592 |||| || |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1659 gagggtgtcagcaaggacgaggccgaggatgccaagaagcagctcgaggaggtcggcgcc 1718 Query: 593 aaggtgtccatcgcgtaactctaggt-atattaggactcc 631 ||||||||||| |||| || |||||| || |||||||||| Sbjct: 1719 aaggtgtccattgcgtgacactaggtaattttaggactcc 1758 Score = 93.7 bits (47), Expect = 9e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 69 ccatggcttccaccacgctctcccccgccttctccctcctctcgctcccctcctcctcc 127 |||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 1177 ccatggcttccaccgcgctctcctccgccttctccctcctctccctcccctcctcctcc 1235