BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem213c13 (1558 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 202 3e-48 dbj|AP005470.3| Oryza sativa (japonica cultivar-group) genomic D... 202 3e-48 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 123 2e-24 dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic D... 123 2e-24 dbj|AB108128.1| Phleum pratense DNA, SSR, microsatellite A03-F03 98 1e-16 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 202 bits (102), Expect = 3e-48 Identities = 156/174 (89%) Strand = Plus / Plus Query: 990 cctcctcccggacgtgagggtggagttcgccggcgcgaacctgatgctgaaaactgtgtc 1049 ||||||||| ||||||| ||||||||||||||||||||||||| ||||||| || ||||| Sbjct: 19144634 cctcctccccgacgtgaaggtggagttcgccggcgcgaacctggtgctgaagacggtgtc 19144693 Query: 1050 gcaccgcgcgccggggcaggcggtgaagatcatcgccgcgctcgagggccggtcgctgga 1109 ||| || ||||||||||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 19144694 gcagcggtcgccggggcaggcggtgaagatcatcgccgccctggagggccgatcgctgga 19144753 Query: 1110 gatcctccacgccaagatcagcagcgtcaacaacaccgccgtgaactccttcac 1163 ||| || |||||||||||||||| |||| | |||||||||| ||||||||||| Sbjct: 19144754 gattcttcacgccaagatcagcaccgtcgatgacaccgccgtcaactccttcac 19144807 Score = 176 bits (89), Expect = 2e-40 Identities = 119/129 (92%) Strand = Plus / Plus Query: 583 ggagaccaagcatccatcataggtggggtggtggactacatcaaggagctgcagcaagtg 642 |||||||| |||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 19144194 ggagaccaggcatccatcataggaggagtggtggactacatcaaggagctgcagcaagta 19144253 Query: 643 ctgcagtcgctggagaccaagaagcagcgcaaggcctacaccgagcaggtcctcagccca 702 |||| ||||||||| |||||||||||||||||| ||||||||| ||||| ||||||||| Sbjct: 19144254 ttgcactcgctggaggccaagaagcagcgcaaggtctacaccgaccaggtgctcagccca 19144313 Query: 703 cggccgccg 711 ||||||||| Sbjct: 19144314 cggccgccg 19144322 Score = 111 bits (56), Expect = 9e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 763 ctcaagtccacgccaccgctgagcccgcggctcgccgtcccgatcagccccaggacgccg 822 |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 19144392 ctcaagtccacgccgccgctcagcccgcggctcgccgtgccgatcagccccaggacgccg 19144451 Query: 823 ccgatgcccggcagccccta 842 |||| |||||| || ||||| Sbjct: 19144452 ccgacgcccggtagtcccta 19144471 Score = 101 bits (51), Expect = 8e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 479 cgccgaagacgtcgcacatcacggtagagcgcaaccggaggaagcagatgaacgagcacc 538 |||| |||||| |||||||| | || |||||||||||||||||||||||||||||| ||| Sbjct: 19143241 cgcccaagacggcgcacatcgccgtggagcgcaaccggaggaagcagatgaacgagaacc 19143300 Query: 539 tcgccgtgttacggtcgctgatgccttgcttctatgtcaagcg 581 |||||||| | || || || ||||| |||||||| |||||||| Sbjct: 19143301 tcgccgtgcttcgctccctcatgccatgcttctacgtcaagcg 19143343 Score = 79.8 bits (40), Expect = 3e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 215 ccgacgccgacgacctcttcagcatcctcgagacgtgggaggactgcg 262 ||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 19142917 ccgacgccgacgacctcttcaccatcctcgagacgtgggagggctgcg 19142964 Score = 79.8 bits (40), Expect = 3e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 1169 agattggaatcgagtgtgagctcagcgctgaagagctggtgcaagagattcagcaaacgt 1228 |||||||||| ||||| |||||||||||||||||| |||| || | |||||||||||||| Sbjct: 19146321 agattggaattgagtgcgagctcagcgctgaagagttggtacaggtgattcagcaaacgt 19146380 Query: 1229 tcac 1232 |||| Sbjct: 19146381 tcac 19146384 >dbj|AP005470.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0043B22 Length = 158857 Score = 202 bits (102), Expect = 3e-48 Identities = 156/174 (89%) Strand = Plus / Plus Query: 990 cctcctcccggacgtgagggtggagttcgccggcgcgaacctgatgctgaaaactgtgtc 1049 ||||||||| ||||||| ||||||||||||||||||||||||| ||||||| || ||||| Sbjct: 48119 cctcctccccgacgtgaaggtggagttcgccggcgcgaacctggtgctgaagacggtgtc 48178 Query: 1050 gcaccgcgcgccggggcaggcggtgaagatcatcgccgcgctcgagggccggtcgctgga 1109 ||| || ||||||||||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 48179 gcagcggtcgccggggcaggcggtgaagatcatcgccgccctggagggccgatcgctgga 48238 Query: 1110 gatcctccacgccaagatcagcagcgtcaacaacaccgccgtgaactccttcac 1163 ||| || |||||||||||||||| |||| | |||||||||| ||||||||||| Sbjct: 48239 gattcttcacgccaagatcagcaccgtcgatgacaccgccgtcaactccttcac 48292 Score = 176 bits (89), Expect = 2e-40 Identities = 119/129 (92%) Strand = Plus / Plus Query: 583 ggagaccaagcatccatcataggtggggtggtggactacatcaaggagctgcagcaagtg 642 |||||||| |||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 47679 ggagaccaggcatccatcataggaggagtggtggactacatcaaggagctgcagcaagta 47738 Query: 643 ctgcagtcgctggagaccaagaagcagcgcaaggcctacaccgagcaggtcctcagccca 702 |||| ||||||||| |||||||||||||||||| ||||||||| ||||| ||||||||| Sbjct: 47739 ttgcactcgctggaggccaagaagcagcgcaaggtctacaccgaccaggtgctcagccca 47798 Query: 703 cggccgccg 711 ||||||||| Sbjct: 47799 cggccgccg 47807 Score = 111 bits (56), Expect = 9e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 763 ctcaagtccacgccaccgctgagcccgcggctcgccgtcccgatcagccccaggacgccg 822 |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 47877 ctcaagtccacgccgccgctcagcccgcggctcgccgtgccgatcagccccaggacgccg 47936 Query: 823 ccgatgcccggcagccccta 842 |||| |||||| || ||||| Sbjct: 47937 ccgacgcccggtagtcccta 47956 Score = 101 bits (51), Expect = 8e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 479 cgccgaagacgtcgcacatcacggtagagcgcaaccggaggaagcagatgaacgagcacc 538 |||| |||||| |||||||| | || |||||||||||||||||||||||||||||| ||| Sbjct: 46726 cgcccaagacggcgcacatcgccgtggagcgcaaccggaggaagcagatgaacgagaacc 46785 Query: 539 tcgccgtgttacggtcgctgatgccttgcttctatgtcaagcg 581 |||||||| | || || || ||||| |||||||| |||||||| Sbjct: 46786 tcgccgtgcttcgctccctcatgccatgcttctacgtcaagcg 46828 Score = 79.8 bits (40), Expect = 3e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 215 ccgacgccgacgacctcttcagcatcctcgagacgtgggaggactgcg 262 ||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 46402 ccgacgccgacgacctcttcaccatcctcgagacgtgggagggctgcg 46449 Score = 79.8 bits (40), Expect = 3e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 1169 agattggaatcgagtgtgagctcagcgctgaagagctggtgcaagagattcagcaaacgt 1228 |||||||||| ||||| |||||||||||||||||| |||| || | |||||||||||||| Sbjct: 49806 agattggaattgagtgcgagctcagcgctgaagagttggtacaggtgattcagcaaacgt 49865 Query: 1229 tcac 1232 |||| Sbjct: 49866 tcac 49869 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 123 bits (62), Expect = 2e-24 Identities = 110/126 (87%) Strand = Plus / Minus Query: 995 tcccggacgtgagggtggagttcgccggcgcgaacctgatgctgaaaactgtgtcgcacc 1054 |||| ||||||||||||||||||||||| |||||||| ||||||| || |||||||||| Sbjct: 8880215 tccccgacgtgagggtggagttcgccgggccgaacctggtgctgaagacggtgtcgcacc 8880156 Query: 1055 gcgcgccggggcaggcggtgaagatcatcgccgcgctcgagggccggtcgctggagatcc 1114 |||||||||| |||||| | |||||||||||||| || ||| ||| ||||| ||||||| Sbjct: 8880155 gcgcgccgggtcaggcgctcaagatcatcgccgctctggagagcctctcgctcgagatcc 8880096 Query: 1115 tccacg 1120 | |||| Sbjct: 8880095 tgcacg 8880090 Score = 123 bits (62), Expect = 2e-24 Identities = 89/98 (90%) Strand = Plus / Minus Query: 482 cgaagacgtcgcacatcacggtagagcgcaaccggaggaagcagatgaacgagcacctcg 541 |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 8881370 cgaagatgtcgcacatcacggtggagcgcaaccggaggaagcagatgaacgagcacctcg 8881311 Query: 542 ccgtgttacggtcgctgatgccttgcttctatgtcaag 579 |||| | || ||||| ||||| |||||||| |||||| Sbjct: 8881310 ccgtcctgcgctcgctcatgccatgcttctacgtcaag 8881273 Score = 111 bits (56), Expect = 9e-21 Identities = 104/120 (86%) Strand = Plus / Minus Query: 598 atcataggtggggtggtggactacatcaaggagctgcagcaagtgctgcagtcgctggag 657 |||||||| ||||||||||| |||||||||||||| ||||||||||| | ||||||||| Sbjct: 8880717 atcataggaggggtggtggattacatcaaggagcttcagcaagtgcttcgctcgctggag 8880658 Query: 658 accaagaagcagcgcaaggcctacaccgagcaggtcctcagcccacggccgccgccggcg 717 |||||||| | || |||||||| |||| ||||| |||||||| |||||| |||||||| Sbjct: 8880657 gccaagaagaatcggaaggcctatgccgaccaggtgctcagcccgcggccgtcgccggcg 8880598 >dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0613F08 Length = 142937 Score = 123 bits (62), Expect = 2e-24 Identities = 110/126 (87%) Strand = Plus / Minus Query: 995 tcccggacgtgagggtggagttcgccggcgcgaacctgatgctgaaaactgtgtcgcacc 1054 |||| ||||||||||||||||||||||| |||||||| ||||||| || |||||||||| Sbjct: 85233 tccccgacgtgagggtggagttcgccgggccgaacctggtgctgaagacggtgtcgcacc 85174 Query: 1055 gcgcgccggggcaggcggtgaagatcatcgccgcgctcgagggccggtcgctggagatcc 1114 |||||||||| |||||| | |||||||||||||| || ||| ||| ||||| ||||||| Sbjct: 85173 gcgcgccgggtcaggcgctcaagatcatcgccgctctggagagcctctcgctcgagatcc 85114 Query: 1115 tccacg 1120 | |||| Sbjct: 85113 tgcacg 85108 Score = 123 bits (62), Expect = 2e-24 Identities = 89/98 (90%) Strand = Plus / Minus Query: 482 cgaagacgtcgcacatcacggtagagcgcaaccggaggaagcagatgaacgagcacctcg 541 |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 86388 cgaagatgtcgcacatcacggtggagcgcaaccggaggaagcagatgaacgagcacctcg 86329 Query: 542 ccgtgttacggtcgctgatgccttgcttctatgtcaag 579 |||| | || ||||| ||||| |||||||| |||||| Sbjct: 86328 ccgtcctgcgctcgctcatgccatgcttctacgtcaag 86291 Score = 111 bits (56), Expect = 9e-21 Identities = 104/120 (86%) Strand = Plus / Minus Query: 598 atcataggtggggtggtggactacatcaaggagctgcagcaagtgctgcagtcgctggag 657 |||||||| ||||||||||| |||||||||||||| ||||||||||| | ||||||||| Sbjct: 85735 atcataggaggggtggtggattacatcaaggagcttcagcaagtgcttcgctcgctggag 85676 Query: 658 accaagaagcagcgcaaggcctacaccgagcaggtcctcagcccacggccgccgccggcg 717 |||||||| | || |||||||| |||| ||||| |||||||| |||||| |||||||| Sbjct: 85675 gccaagaagaatcggaaggcctatgccgaccaggtgctcagcccgcggccgtcgccggcg 85616 >dbj|AB108128.1| Phleum pratense DNA, SSR, microsatellite A03-F03 Length = 548 Score = 97.6 bits (49), Expect = 1e-16 Identities = 77/85 (90%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 496 atcacggtagagcgcaaccggaggaagcagatgaacgagcacctcgccgtgttacggtcg 555 |||||||| |||||||||||||||||||||||||||||| |||| |||||| | ||| || Sbjct: 23 atcacggtggagcgcaaccggaggaagcagatgaacgagaaccttgccgtgctgcggacg 82 Query: 556 ctgatgcctt-gcttctatgtcaag 579 || ||||||| |||||||||||||| Sbjct: 83 ctcatgccttggcttctatgtcaag 107