BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem213a13 (1673 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001063317.1| Oryza sativa (japonica cultivar-group) Os06g... 361 6e-96 dbj|AK067250.1| Oryza sativa (japonica cultivar-group) cDNA clon... 361 6e-96 gb|EF059989.1| Brachypodium sylvaticum hypothetical protein (57h... 198 5e-47 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 174 7e-40 dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic D... 174 7e-40 >ref|NM_001063317.1| Oryza sativa (japonica cultivar-group) Os06g0144600 (Os06g0144600) mRNA, partial cds Length = 2583 Score = 361 bits (182), Expect = 6e-96 Identities = 278/310 (89%) Strand = Plus / Plus Query: 991 cagcattggaaagagtgtaaatggttccctgttgtgggtgattgaaatatcagacaagcc 1050 |||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 272 cagcattggaaagagtgtgaatggtgtcacattgtgggtgattgaaatatcagacaagcc 331 Query: 1051 tgggcaaagagaagctgaaccagcattcaagttcattggaaatgtccatggtgatgagcc 1110 |||||||| |||||||||||||||||||||| |||| ||||||||||||||||| || Sbjct: 332 tgggcaaaaggaagctgaaccagcattcaagtatgttggtaatgtccatggtgatgaacc 391 Query: 1111 tgttggaagagaggttcttatgcatcttgcgaattggctgtgtgacaattacctgaagaa 1170 ||||||||| ||||||||||| | ||||| |||||||||||||| || || ||||| | Sbjct: 392 tgttggaagggaggttcttataaagcttgcaaattggctgtgtgataactatttgaagga 451 Query: 1171 tcccttggcaactcttattgtggagaacacgcaccttcatatacttccgacaatgaaccc 1230 |||||||||||||||||||||| | |||| ||| |||||||||||||| || |||||||| Sbjct: 452 tcccttggcaactcttattgtgaaaaacatgcatcttcatatacttccaacgatgaaccc 511 Query: 1231 agatggatttgctcttagaaggcgtggtaatgcaaacaatgttgatctcaacagagattt 1290 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 512 tgatggatttgctcttagaagacgtggtaatgcaaacaatgttgacctcaacagagattt 571 Query: 1291 tcctgaccaa 1300 |||||||||| Sbjct: 572 tcctgaccaa 581 Score = 214 bits (108), Expect = 9e-52 Identities = 141/152 (92%) Strand = Plus / Plus Query: 1301 tttttccccatcaacaatgacattaactacagacaacctgaaactagagctatcatgaac 1360 |||||| ||| |||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 676 tttttcaccaacaacgatgaaattaactacagacaacctgaaactagagctattatgaac 735 Query: 1361 tggataaagcaagaacacttcacggcctctgctagtttgcatgggggtgctcttgttgca 1420 ||| |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 736 tgggtaaaacaagaacacttcactgcctccgctagtttgcatgggggtgctcttgttgca 795 Query: 1421 aattatccatgggatggatctagagataaaag 1452 ||||||||||||||||| ||||||||| |||| Sbjct: 796 aattatccatgggatgggtctagagatcaaag 827 Score = 91.7 bits (46), Expect = 9e-15 Identities = 118/142 (83%) Strand = Plus / Plus Query: 221 atgggtcattttcacgtaacctgcttgaggataagccccggatcacggaagaaatgacct 280 |||||||||||| || ||||||||| ||||||| ||| ||| ||||| ||| || | Sbjct: 133 atgggtcatttttgcgcaacctgcttcaggataatcccatgataacggaggaattggtcc 192 Query: 281 acggatatatgagcaattctgaacttgagattgctatgcatgcctttggaagttgctgtc 340 |||||||||||||| || ||||||||||||||| |||||||| ||||||| ||| || Sbjct: 193 gtggatatatgagcaactcggaacttgagattgctgtgcatgccattggaagccgctatc 252 Query: 341 ctaatgtctccagggtatacag 362 ||||| |||||||| ||||||| Sbjct: 253 ctaatatctccaggatatacag 274 >dbj|AK067250.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098L05, full insert sequence Length = 2586 Score = 361 bits (182), Expect = 6e-96 Identities = 278/310 (89%) Strand = Plus / Plus Query: 991 cagcattggaaagagtgtaaatggttccctgttgtgggtgattgaaatatcagacaagcc 1050 |||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 274 cagcattggaaagagtgtgaatggtgtcacattgtgggtgattgaaatatcagacaagcc 333 Query: 1051 tgggcaaagagaagctgaaccagcattcaagttcattggaaatgtccatggtgatgagcc 1110 |||||||| |||||||||||||||||||||| |||| ||||||||||||||||| || Sbjct: 334 tgggcaaaaggaagctgaaccagcattcaagtatgttggtaatgtccatggtgatgaacc 393 Query: 1111 tgttggaagagaggttcttatgcatcttgcgaattggctgtgtgacaattacctgaagaa 1170 ||||||||| ||||||||||| | ||||| |||||||||||||| || || ||||| | Sbjct: 394 tgttggaagggaggttcttataaagcttgcaaattggctgtgtgataactatttgaagga 453 Query: 1171 tcccttggcaactcttattgtggagaacacgcaccttcatatacttccgacaatgaaccc 1230 |||||||||||||||||||||| | |||| ||| |||||||||||||| || |||||||| Sbjct: 454 tcccttggcaactcttattgtgaaaaacatgcatcttcatatacttccaacgatgaaccc 513 Query: 1231 agatggatttgctcttagaaggcgtggtaatgcaaacaatgttgatctcaacagagattt 1290 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 514 tgatggatttgctcttagaagacgtggtaatgcaaacaatgttgacctcaacagagattt 573 Query: 1291 tcctgaccaa 1300 |||||||||| Sbjct: 574 tcctgaccaa 583 Score = 206 bits (104), Expect = 2e-49 Identities = 140/152 (92%) Strand = Plus / Plus Query: 1301 tttttccccatcaacaatgacattaactacagacaacctgaaactagagctatcatgaac 1360 |||||| ||| |||| |||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 678 tttttcaccaacaacgatgaaattaactacagacaacctgaaactagggctattatgaac 737 Query: 1361 tggataaagcaagaacacttcacggcctctgctagtttgcatgggggtgctcttgttgca 1420 ||| |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 738 tgggtaaaacaagaacacttcactgcctccgctagtttgcatgggggtgctcttgttgca 797 Query: 1421 aattatccatgggatggatctagagataaaag 1452 ||||||||||||||||| ||||||||| |||| Sbjct: 798 aattatccatgggatgggtctagagatcaaag 829 Score = 91.7 bits (46), Expect = 9e-15 Identities = 118/142 (83%) Strand = Plus / Plus Query: 221 atgggtcattttcacgtaacctgcttgaggataagccccggatcacggaagaaatgacct 280 |||||||||||| || ||||||||| ||||||| ||| ||| ||||| ||| || | Sbjct: 135 atgggtcatttttgcgcaacctgcttcaggataatcccatgataacggaggaattggtcc 194 Query: 281 acggatatatgagcaattctgaacttgagattgctatgcatgcctttggaagttgctgtc 340 |||||||||||||| || ||||||||||||||| |||||||| ||||||| ||| || Sbjct: 195 gtggatatatgagcaactcggaacttgagattgctgtgcatgccattggaagccgctatc 254 Query: 341 ctaatgtctccagggtatacag 362 ||||| |||||||| ||||||| Sbjct: 255 ctaatatctccaggatatacag 276 >gb|EF059989.1| Brachypodium sylvaticum hypothetical protein (57h21.1), methyl sulfoxide reductase (57h21.2), hypothetical protein (57h21.3), oxidoreductase (57h21.4), auxin efflux carrier (57h21.6), CCR4 associated factor-like protein (57h21.7), ribosomal subunit 8E protein (57h21.8), expressed protein (57h21.9), expressed protein (57h21.10), acid phosphatase (57h21.11), polygalacturonase inhibitor (57h21.12), proteasome (57h21.13), leucine carboxyl methyl transferase (57h21.14), homeobox (57h21.15), serine threonine kinase (57h21.16), hypothetical protein (57h21.17), GFP binding protein (57h21.18), zinc carboxy peptidase (57h21.20), DNA repair protein (57h21.21), coatomer complex subunit (57h21.22), sulfate transporter (57h21.23), hypothetical protein (57h21.24), hypothetical protein (57h21.25), hypothetical protein (57h21.26), acyl-ATP thioesterase (57h21.27), hypothetical protein (57h21.28), hypothetical protein (57h21.29), superoxide dismutase (57h21.30), expressed protein (57h21.31), protein kinase (57h21.32), early nodulin protein (57h21.33), early nodulin protein (57h21.34), hypothetical protein (57h21.36), hypothetical protein (57h21.37), and expressed protein (57h21.38) genes, complete cds Length = 371374 Score = 198 bits (100), Expect = 5e-47 Identities = 118/124 (95%) Strand = Plus / Plus Query: 1177 ggcaactcttattgtggagaacacgcaccttcatatacttccgacaatgaacccagatgg 1236 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 121587 ggcaactcttattgtggagaacacgcaccttcatatacttccaacaatgaacccagatgg 121646 Query: 1237 atttgctcttagaaggcgtggtaatgcaaacaatgttgatctcaacagagattttcctga 1296 ||||||| | |||||||||||||||||||||||| ||||||| |||||||| |||||||| Sbjct: 121647 atttgctttaagaaggcgtggtaatgcaaacaatattgatctgaacagagactttcctga 121706 Query: 1297 ccaa 1300 |||| Sbjct: 121707 ccaa 121710 Score = 151 bits (76), Expect = 1e-32 Identities = 106/116 (91%) Strand = Plus / Plus Query: 904 tctgatatatctccagtaaactcatatattcaaacttcacttaactattctttgttctct 963 |||||| ||||||||||| ||||||||||| ||||||||||| |||||| || |||||| Sbjct: 120484 tctgatgtatctccagtatcctcatatattccaacttcacttacctattccttcttctct 120543 Query: 964 ctttgagggattacacaaacctgttatcagcattggaaagagtgtaaatggttccc 1019 ||||||||||||||||||||||| |||||||||||| | ||||||||||||||||| Sbjct: 120544 ctttgagggattacacaaacctgctatcagcattgggaggagtgtaaatggttccc 120599 Score = 143 bits (72), Expect = 3e-30 Identities = 174/208 (83%) Strand = Plus / Plus Query: 267 ggaagaaatgacctacggatatatgagcaattctgaacttgagattgctatgcatgcctt 326 |||||||||||| ||||||||||||||| ||||||||||||| ||| || || | || Sbjct: 119944 ggaagaaatgactcgcggatatatgagcaactctgaacttgagaatgcgatacaaggttt 120003 Query: 327 tggaagttgctgtcctaatgtctccagggtatacaggtacatgatgtataatactttgct 386 ||||| | ||| ||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 120004 tggaaataaatgttctaatgtgtccaggatatacaggtacatgatgtataatactttgct 120063 Query: 387 cctcggtgatgagtaggtttggagtttctaaaccatctttaagatcaagagtttgtttag 446 || | ||||| ||| ||||||||||||| | ||| || | | | | ||||||||||| Sbjct: 120064 ccctgttgatgcgtatgtttggagtttctcgatcattttgagggttaccagtttgtttag 120123 Query: 447 ccatgtcatattgatattgttatgattg 474 ||||||||||||| |||||| ||||||| Sbjct: 120124 ccatgtcatattgttattgtcatgattg 120151 Score = 139 bits (70), Expect = 4e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 1301 tttttccccatcaacaatgacattaactacagacaacctgaaactagagctatcatgaac 1360 ||||| ||||||||| |||| |||| || |||||||||||||||||||||||| || || Sbjct: 121816 ttttttcccatcaacgatgagattagcttcagacaacctgaaactagagctattataaat 121875 Query: 1361 tggataaagcaagaacacttcacggcctctgctagtttgcatgggg 1406 |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 121876 tggataaagcaagaacacttcacggcttctgctagtttgcatgggg 121921 Score = 117 bits (59), Expect = 2e-22 Identities = 86/95 (90%) Strand = Plus / Plus Query: 1080 agttcattggaaatgtccatggtgatgagcctgttggaagagaggttcttatgcatcttg 1139 ||||||||||||||||||||||||||||||| ||||||||||| || |||||||| |||| Sbjct: 121123 agttcattggaaatgtccatggtgatgagcccgttggaagagaagtccttatgcagcttg 121182 Query: 1140 cgaattggctgtgtgacaattacctgaagaatccc 1174 || ||||||| ||||| || ||||||||| ||||| Sbjct: 121183 cgtattggctatgtgataactacctgaaggatccc 121217 Score = 99.6 bits (50), Expect = 4e-17 Identities = 91/105 (86%), Gaps = 6/105 (5%) Strand = Plus / Plus Query: 91 cctcacgcgcccatggcgatctcgcgcctccactt------cctcctcctcctcctcctc 144 |||||||||| |||||||||||||||||||| ||| ||||||| || |||||||| Sbjct: 119030 cctcacgcgctcatggcgatctcgcgcctccgcttcctctccctcctcttcgtcctcctc 119089 Query: 145 cgcgccttcgcgtcgcttcccacgcaagccgccgcgagaggcggc 189 ||||||||||| ||||| ||||||||||| ||||| ||||||||| Sbjct: 119090 cgcgccttcgcttcgctccccacgcaagcggccgccagaggcggc 119134 Score = 95.6 bits (48), Expect = 6e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 1405 gggtgctcttgttgcaaattatccatgggatggatctagagataaaag 1452 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122676 gggtgctcttgttgcaaattatccatgggatggatctagagataaaag 122723 Score = 91.7 bits (46), Expect = 9e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 1024 gtgggtgattgaaatatcagacaagcctgggcaaagagaagctgaaccagcattcaag 1081 |||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 120689 gtgggtcattgaattatcagacaagcctgggcaaaaagaagctgaaccagcattcaag 120746 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 174 bits (88), Expect = 7e-40 Identities = 115/124 (92%) Strand = Plus / Minus Query: 1177 ggcaactcttattgtggagaacacgcaccttcatatacttccgacaatgaacccagatgg 1236 |||||||||||||||| | |||| ||| |||||||||||||| || |||||||| ||||| Sbjct: 2361606 ggcaactcttattgtgaaaaacatgcatcttcatatacttccaacgatgaaccctgatgg 2361547 Query: 1237 atttgctcttagaaggcgtggtaatgcaaacaatgttgatctcaacagagattttcctga 1296 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2361546 atttgctcttagaagacgtggtaatgcaaacaatgttgacctcaacagagattttcctga 2361487 Query: 1297 ccaa 1300 |||| Sbjct: 2361486 ccaa 2361483 Score = 139 bits (70), Expect = 4e-29 Identities = 97/106 (91%) Strand = Plus / Minus Query: 1301 tttttccccatcaacaatgacattaactacagacaacctgaaactagagctatcatgaac 1360 |||||| ||| |||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 2361388 tttttcaccaacaacgatgaaattaactacagacaacctgaaactagagctattatgaac 2361329 Query: 1361 tggataaagcaagaacacttcacggcctctgctagtttgcatgggg 1406 ||| |||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 2361328 tgggtaaaacaagaacacttcactgcctccgctagtttgcatgggg 2361283 Score = 101 bits (51), Expect = 9e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 283 ggatatatgagcaattctgaacttgagattgctatgcatgcctttggaagttgctgtcct 342 |||||||||||||| || ||||||||||||||| |||||||| ||||||| ||| |||| Sbjct: 2363692 ggatatatgagcaactcggaacttgagattgctgtgcatgccattggaagccgctatcct 2363633 Query: 343 aatgtctccagggtatacaggtacatgatgt 373 ||| |||||||| ||||||||||||| |||| Sbjct: 2363632 aatatctccaggatatacaggtacattatgt 2363602 Score = 99.6 bits (50), Expect = 4e-17 Identities = 56/58 (96%) Strand = Plus / Minus Query: 1024 gtgggtgattgaaatatcagacaagcctgggcaaagagaagctgaaccagcattcaag 1081 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2362816 gtgggtgattgaaatatcagacaagcctgggcaaaaggaagctgaaccagcattcaag 2362759 Score = 95.6 bits (48), Expect = 6e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 924 ctcatatattcaaacttcacttaactattctttgttctctctttgagggattacacaaac 983 |||||| |||||||||| |||| ||||| ||| |||||||||||||||||| ||| | | Sbjct: 2362999 ctcatacattcaaactttgcttacctattatttattctctctttgagggattgcacgatc 2362940 Query: 984 ctgttatcagcattggaaagagtgtaaatggt 1015 |||||||||||||||||||||||| |||||| Sbjct: 2362939 atgttatcagcattggaaagagtgtgaatggt 2362908 Score = 89.7 bits (45), Expect = 3e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 1086 ttggaaatgtccatggtgatgagcctgttggaagagaggttcttatgcatcttgcgaatt 1145 |||| ||||||||||||||||| ||||||||||| ||||||||||| | ||||| |||| Sbjct: 2361850 ttggtaatgtccatggtgatgaacctgttggaagggaggttcttataaagcttgcaaatt 2361791 Query: 1146 ggctgtgtgacaattacctgaagaatcccttgg 1178 |||||||||| || || ||||| ||||||||| Sbjct: 2361790 ggctgtgtgataactatttgaaggatcccttgg 2361758 Score = 79.8 bits (40), Expect = 3e-11 Identities = 46/48 (95%) Strand = Plus / Minus Query: 1405 gggtgctcttgttgcaaattatccatgggatggatctagagataaaag 1452 ||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 2360259 gggtgctcttgttgcaaattatccatgggatgggtctagagatcaaag 2360212 >dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 174 bits (88), Expect = 7e-40 Identities = 115/124 (92%) Strand = Plus / Minus Query: 1177 ggcaactcttattgtggagaacacgcaccttcatatacttccgacaatgaacccagatgg 1236 |||||||||||||||| | |||| ||| |||||||||||||| || |||||||| ||||| Sbjct: 83407 ggcaactcttattgtgaaaaacatgcatcttcatatacttccaacgatgaaccctgatgg 83348 Query: 1237 atttgctcttagaaggcgtggtaatgcaaacaatgttgatctcaacagagattttcctga 1296 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 83347 atttgctcttagaagacgtggtaatgcaaacaatgttgacctcaacagagattttcctga 83288 Query: 1297 ccaa 1300 |||| Sbjct: 83287 ccaa 83284 Score = 139 bits (70), Expect = 4e-29 Identities = 97/106 (91%) Strand = Plus / Minus Query: 1301 tttttccccatcaacaatgacattaactacagacaacctgaaactagagctatcatgaac 1360 |||||| ||| |||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 83189 tttttcaccaacaacgatgaaattaactacagacaacctgaaactagagctattatgaac 83130 Query: 1361 tggataaagcaagaacacttcacggcctctgctagtttgcatgggg 1406 ||| |||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 83129 tgggtaaaacaagaacacttcactgcctccgctagtttgcatgggg 83084 Score = 101 bits (51), Expect = 9e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 283 ggatatatgagcaattctgaacttgagattgctatgcatgcctttggaagttgctgtcct 342 |||||||||||||| || ||||||||||||||| |||||||| ||||||| ||| |||| Sbjct: 85493 ggatatatgagcaactcggaacttgagattgctgtgcatgccattggaagccgctatcct 85434 Query: 343 aatgtctccagggtatacaggtacatgatgt 373 ||| |||||||| ||||||||||||| |||| Sbjct: 85433 aatatctccaggatatacaggtacattatgt 85403 Score = 99.6 bits (50), Expect = 4e-17 Identities = 56/58 (96%) Strand = Plus / Minus Query: 1024 gtgggtgattgaaatatcagacaagcctgggcaaagagaagctgaaccagcattcaag 1081 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 84617 gtgggtgattgaaatatcagacaagcctgggcaaaaggaagctgaaccagcattcaag 84560 Score = 95.6 bits (48), Expect = 6e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 924 ctcatatattcaaacttcacttaactattctttgttctctctttgagggattacacaaac 983 |||||| |||||||||| |||| ||||| ||| |||||||||||||||||| ||| | | Sbjct: 84800 ctcatacattcaaactttgcttacctattatttattctctctttgagggattgcacgatc 84741 Query: 984 ctgttatcagcattggaaagagtgtaaatggt 1015 |||||||||||||||||||||||| |||||| Sbjct: 84740 atgttatcagcattggaaagagtgtgaatggt 84709 Score = 89.7 bits (45), Expect = 3e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 1086 ttggaaatgtccatggtgatgagcctgttggaagagaggttcttatgcatcttgcgaatt 1145 |||| ||||||||||||||||| ||||||||||| ||||||||||| | ||||| |||| Sbjct: 83651 ttggtaatgtccatggtgatgaacctgttggaagggaggttcttataaagcttgcaaatt 83592 Query: 1146 ggctgtgtgacaattacctgaagaatcccttgg 1178 |||||||||| || || ||||| ||||||||| Sbjct: 83591 ggctgtgtgataactatttgaaggatcccttgg 83559 Score = 79.8 bits (40), Expect = 3e-11 Identities = 46/48 (95%) Strand = Plus / Minus Query: 1405 gggtgctcttgttgcaaattatccatgggatggatctagagataaaag 1452 ||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 82060 gggtgctcttgttgcaaattatccatgggatgggtctagagatcaaag 82013