BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem212k16 (1581 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 252 4e-63 gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 geno... 252 4e-63 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 252 bits (127), Expect = 4e-63 Identities = 235/271 (86%) Strand = Plus / Plus Query: 724 gtacgtgggcactgccgcgtacatgagcccggagcgtttcgacccggaggcgcacggcgg 783 ||||| |||||| || |||||||||||||| ||||| |||||| | ||| ||||||| Sbjct: 28658910 gtacgagggcacggcggcgtacatgagccccgagcggttcgactccgagctccacggcga 28658969 Query: 784 gcactacgacccctgcgccgccgacgtgtggagcctgggggtcaccctcctggagctcct 843 | |||||||| |||||||||||||||| ||||||| || ||| ||||||||||||| Sbjct: 28658970 cggcgccgaccccttcgccgccgacgtgtggggcctgggcgtgaccgtcctggagctcct 28659029 Query: 844 cttgggtcggtacccgctgctccccgccgggcagcagctgagctgggcggcgctcatgtg 903 | ||| || |||||||||||||||||||| ||| ||| ||||||||||||||||||||| Sbjct: 28659030 catggcgcgctacccgctgctccccgccggccagaagccgagctgggcggcgctcatgtg 28659089 Query: 904 cgccatctgcttcggcgagccgcccgcgctgcccgacggcgcagcctcgccggagttccg 963 |||||||||||||||||||| || |||||||||||||||| |||||||||||| |||| Sbjct: 28659090 cgccatctgcttcggcgagctcccgccgctgcccgacggcgcggcctcgccggagctccg 28659149 Query: 964 ggggttcgtcgccgcgtgcctgcacaaggac 994 || |||| ||||||||||||||||||||||| Sbjct: 28659150 ggcgttcctcgccgcgtgcctgcacaaggac 28659180 Score = 212 bits (107), Expect = 3e-51 Identities = 258/308 (83%), Gaps = 9/308 (2%) Strand = Plus / Plus Query: 392 gaggcggacgtccttagccgcacggcctcgccgttcatcgtccggtgccacgcagtc--- 448 ||||||||| | || ||||| |||||||| |||||| |||||||||||||||| ||| Sbjct: 28658557 gaggcggacatactcagccggacggcctccccgttcgtcgtccggtgccacgccgtcctt 28658616 Query: 449 -----ctcc-ccgccgcctccggcgacgtcgcgctgctcctcgagctggtggacggcggg 502 |||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28658617 ccggcctccgcctccgcctccggcgacgtcgcgctgctcctcgagctggtggacggcggg 28658676 Query: 503 tcgctcgacgcggtcaggagccgccgcggatcgttcccggaggctgcgctcgcggaggtg 562 ||||||| | | ||| | |||| ||| ||||||||||||| ||| ||||||||||| Sbjct: 28658677 tcgctcgcctccgtcgcggcccgcgccggggcgttcccggaggcggcggtcgcggaggtg 28658736 Query: 563 gcggcgcaggcgctgtccgggcttgcgtacctccacgcccgccgcatcgtgcacctcgac 622 || |||||||||||||||||||| |||| |||||||||||||||| |||| |||| |||| Sbjct: 28658737 gccgcgcaggcgctgtccgggctggcgtgcctccacgcccgccgcgtcgtccaccgcgac 28658796 Query: 623 atcaaaccggcgaacgtccttgccagcgccgctggggaggtcaaggtcgccgacttcggc 682 ||||| |||| ||| |||| | ||||| | || ||||| ||| ||||||||||||| Sbjct: 28658797 atcaagccgggcaacctcctcgtcagcgtggacggcgaggtgaagatcgccgacttcggg 28658856 Query: 683 atcgccaa 690 |||||||| Sbjct: 28658857 atcgccaa 28658864 Score = 153 bits (77), Expect = 3e-33 Identities = 101/109 (92%) Strand = Plus / Plus Query: 246 ccagccagttccgcctcgccgacttcgacaagctcgccgtcctgggccgcgggaacggcg 305 ||||||||||||| |||||||||||||| | | ||||||| || ||||||||||| |||| Sbjct: 28658405 ccagccagttccggctcgccgacttcgagagggtcgccgtgctcggccgcgggaatggcg 28658464 Query: 306 gcaccgtctacaaggttcgccaccgcgagacgtgcgcgctctacgcgct 354 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 28658465 gcaccgtgtacaaggttcgccaccgcgagacgtgcgcgctctacgcgct 28658513 >gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete sequence Length = 158839 Score = 252 bits (127), Expect = 4e-63 Identities = 235/271 (86%) Strand = Plus / Minus Query: 724 gtacgtgggcactgccgcgtacatgagcccggagcgtttcgacccggaggcgcacggcgg 783 ||||| |||||| || |||||||||||||| ||||| |||||| | ||| ||||||| Sbjct: 131310 gtacgagggcacggcggcgtacatgagccccgagcggttcgactccgagctccacggcga 131251 Query: 784 gcactacgacccctgcgccgccgacgtgtggagcctgggggtcaccctcctggagctcct 843 | |||||||| |||||||||||||||| ||||||| || ||| ||||||||||||| Sbjct: 131250 cggcgccgaccccttcgccgccgacgtgtggggcctgggcgtgaccgtcctggagctcct 131191 Query: 844 cttgggtcggtacccgctgctccccgccgggcagcagctgagctgggcggcgctcatgtg 903 | ||| || |||||||||||||||||||| ||| ||| ||||||||||||||||||||| Sbjct: 131190 catggcgcgctacccgctgctccccgccggccagaagccgagctgggcggcgctcatgtg 131131 Query: 904 cgccatctgcttcggcgagccgcccgcgctgcccgacggcgcagcctcgccggagttccg 963 |||||||||||||||||||| || |||||||||||||||| |||||||||||| |||| Sbjct: 131130 cgccatctgcttcggcgagctcccgccgctgcccgacggcgcggcctcgccggagctccg 131071 Query: 964 ggggttcgtcgccgcgtgcctgcacaaggac 994 || |||| ||||||||||||||||||||||| Sbjct: 131070 ggcgttcctcgccgcgtgcctgcacaaggac 131040 Score = 212 bits (107), Expect = 3e-51 Identities = 258/308 (83%), Gaps = 9/308 (2%) Strand = Plus / Minus Query: 392 gaggcggacgtccttagccgcacggcctcgccgttcatcgtccggtgccacgcagtc--- 448 ||||||||| | || ||||| |||||||| |||||| |||||||||||||||| ||| Sbjct: 131663 gaggcggacatactcagccggacggcctccccgttcgtcgtccggtgccacgccgtcctt 131604 Query: 449 -----ctcc-ccgccgcctccggcgacgtcgcgctgctcctcgagctggtggacggcggg 502 |||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131603 ccggcctccgcctccgcctccggcgacgtcgcgctgctcctcgagctggtggacggcggg 131544 Query: 503 tcgctcgacgcggtcaggagccgccgcggatcgttcccggaggctgcgctcgcggaggtg 562 ||||||| | | ||| | |||| ||| ||||||||||||| ||| ||||||||||| Sbjct: 131543 tcgctcgcctccgtcgcggcccgcgccggggcgttcccggaggcggcggtcgcggaggtg 131484 Query: 563 gcggcgcaggcgctgtccgggcttgcgtacctccacgcccgccgcatcgtgcacctcgac 622 || |||||||||||||||||||| |||| |||||||||||||||| |||| |||| |||| Sbjct: 131483 gccgcgcaggcgctgtccgggctggcgtgcctccacgcccgccgcgtcgtccaccgcgac 131424 Query: 623 atcaaaccggcgaacgtccttgccagcgccgctggggaggtcaaggtcgccgacttcggc 682 ||||| |||| ||| |||| | ||||| | || ||||| ||| ||||||||||||| Sbjct: 131423 atcaagccgggcaacctcctcgtcagcgtggacggcgaggtgaagatcgccgacttcggg 131364 Query: 683 atcgccaa 690 |||||||| Sbjct: 131363 atcgccaa 131356 Score = 153 bits (77), Expect = 3e-33 Identities = 101/109 (92%) Strand = Plus / Minus Query: 246 ccagccagttccgcctcgccgacttcgacaagctcgccgtcctgggccgcgggaacggcg 305 ||||||||||||| |||||||||||||| | | ||||||| || ||||||||||| |||| Sbjct: 131815 ccagccagttccggctcgccgacttcgagagggtcgccgtgctcggccgcgggaatggcg 131756 Query: 306 gcaccgtctacaaggttcgccaccgcgagacgtgcgcgctctacgcgct 354 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131755 gcaccgtgtacaaggttcgccaccgcgagacgtgcgcgctctacgcgct 131707