BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem212j23 (1491 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001050793.1| Oryza sativa (japonica cultivar-group) Os01g... 716 0.0 dbj|AK068036.1| Oryza sativa (japonica cultivar-group) cDNA clon... 708 0.0 gb|AY110760.1| Zea mays CL34954_1 mRNA sequence 285 3e-73 emb|CT834583.1| Oryza sativa (indica cultivar-group) cDNA clone:... 244 9e-61 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 194 7e-46 >ref|NM_001050793.1| Oryza sativa (japonica cultivar-group) Os01g0751300 (Os01g0751300) mRNA, complete cds Length = 1776 Score = 716 bits (361), Expect = 0.0 Identities = 643/737 (87%) Strand = Plus / Plus Query: 346 caaatgatgaagatgaagatgatgtaaggagtgatcatgaagctttattagacagaacaa 405 |||| |||||||||||||| ||| |||||| | ||||| |||||| | || ||||||| Sbjct: 635 caaacgatgaagatgaagaggatacgaggagtcaccatgaggctttactggatagaacaa 694 Query: 406 aaactaaacctggcttccgtcctgttgatgtccgtcgaaggtgttgctcagcaatacagc 465 ||| |||||||||| ||||| |||||||||| || || ||||||||| ||| | |||||| Sbjct: 695 aaaataaacctggcatccgtgctgttgatgttcgccggaggtgttgcccaggagtacagc 754 Query: 466 ttggaagccgccaaaaaattgtgattttggtgcttgtactgtcatttgttgttatgttcg 525 |||||||||| |||||| ||||||||||||||||| |||||||||||||||||| ||| Sbjct: 755 ttggaagccggcaaaaatttgtgattttggtgcttctactgtcatttgttgttacaatcg 814 Query: 526 cctttgccatcctcatctgggttggtagaggagaaaatcctattgattcatcactactaa 585 |||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||| | | Sbjct: 815 ccttcgccatcctcatctggattggtagaggagaaaatcctattgattcatctctattga 874 Query: 586 aaagggtttatttggatgtattttcagtagttgttcttatacttggcggtgctctggcat 645 |||||||||| ||||||||||| ||||||||||||||| ||||||| ||||| ||||||| Sbjct: 875 aaagggtttacttggatgtattctcagtagttgttcttgtacttggtggtgcgctggcat 934 Query: 646 gttatggcgcattgttattctcgaagatgagcaaagtacgttctgaaactgtatcaactg 705 ||||||| ||| | |||| || |||||||||||||| ||||||||||||| |||| ||| Sbjct: 935 gttatggtgcaatactattttcaaagatgagcaaagtgcgttctgaaactggatcatctg 994 Query: 706 agaagaggaaggttgccagtttagctgctgtctcactgatttgtttctcgtcttctgctg 765 ||||| |||||||||| ||||||||| |||| |||||||||||||||||||| || ||| Sbjct: 995 agaagcggaaggttgcaagtttagctactgtgtcactgatttgtttctcgtcgtccgcta 1054 Query: 766 tactagcacttgttactaatgttccagtgcttttgtattggtactcgacagatgcggaca 825 |||||||||||||||| ||||||||||||||| ||||||||||||| |||||| ||| Sbjct: 1055 tactagcacttgttaccaatgttccagtgcttgtgtattggtactcagcagatgaataca 1114 Query: 826 tcatcaacaatgctgttatattgtttttatattattcaataggctcgtcagtgccgtccg 885 |||||||||||||| | ||||||||| | || |||| ||||| || || | ||||| | Sbjct: 1115 tcatcaacaatgctatcatattgtttatgtactatttcataggatcatccataccgtcag 1174 Query: 886 gatttgttttatgggtcatgagagagatgcctcatcggcacacagtagaaagacccacac 945 |||||||| |||||||||||| ||| || ||||||||||| ||||||||||| ||||||| Sbjct: 1175 gatttgttctatgggtcatgaaagatattcctcatcggcagacagtagaaaggcccacac 1234 Query: 946 aatcaagagttgttactttgttcagggacagaccatccgctacacaggatccgcagtgga 1005 ||||||||||||||| |||||||||||| ||||||||| ||||||||||||| || |||| Sbjct: 1235 aatcaagagttgttattttgttcagggatagaccatcccctacacaggatccacaatgga 1294 Query: 1006 gaactgctgttacatcctctaacaaggctctcaaatcaagcccaatttaatctaaagaca 1065 | ||||| |||||||||||||||||||| ||||| |||||||| |||||| | |||||| Sbjct: 1295 ggactgccgttacatcctctaacaaggccctcaagtcaagccctatttaaccagaagaca 1354 Query: 1066 aatcattgacgtggaaa 1082 || | |||| ||||||| Sbjct: 1355 aaccgttgatgtggaaa 1371 Score = 105 bits (53), Expect = 5e-19 Identities = 162/194 (83%), Gaps = 7/194 (3%) Strand = Plus / Plus Query: 1181 agatggatctgtaattcctactttcaaggtgattttagtgat--ggaaacaatggaatta 1238 |||||||| |||||||||||||| ||||| | ||||||||| | ||| || ||||||| Sbjct: 1459 agatggatatgtaattcctactt-caaggaaactttagtgatcagaaaagaagggaatta 1517 Query: 1239 cttgtggatgtagcaaggttctcaatgaaggagtgcacactatgcgtttatccagtagaa 1298 | |||| |||||||| ||||||| | | ||||||||| |||||||||||||| ||||| Sbjct: 1518 cctgtgaatgtagcatggttctcca---atgagtgcacagtatgcgtttatccattagaa 1574 Query: 1299 ctgaggttgggtaaggtttgaagcagtaacaaatgtaaatagccatagaaatgag-tatt 1357 | | ||||||||| || ||| | ||||||||||||||||||||||||||||| || Sbjct: 1575 ttaactctgggtaaggctttaaggattaacaaatgtaaatagccatagaaatgagagttt 1634 Query: 1358 ttcatggtttggct 1371 |||||||||||||| Sbjct: 1635 ttcatggtttggct 1648 >dbj|AK068036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129G23, full insert sequence Length = 1779 Score = 708 bits (357), Expect = 0.0 Identities = 642/737 (87%) Strand = Plus / Plus Query: 346 caaatgatgaagatgaagatgatgtaaggagtgatcatgaagctttattagacagaacaa 405 |||| |||||||||||||| ||| |||||| | ||||| |||||| | || ||||||| Sbjct: 638 caaacgatgaagatgaagaggatacgaggagtcaccatgaggctttactggatagaacaa 697 Query: 406 aaactaaacctggcttccgtcctgttgatgtccgtcgaaggtgttgctcagcaatacagc 465 ||| |||||||||| ||||| ||| |||||| || || ||||||||| ||| | |||||| Sbjct: 698 aaaataaacctggcatccgtgctgctgatgttcgccggaggtgttgcccaggagtacagc 757 Query: 466 ttggaagccgccaaaaaattgtgattttggtgcttgtactgtcatttgttgttatgttcg 525 |||||||||| |||||| ||||||||||||||||| |||||||||||||||||| ||| Sbjct: 758 ttggaagccggcaaaaatttgtgattttggtgcttctactgtcatttgttgttacaatcg 817 Query: 526 cctttgccatcctcatctgggttggtagaggagaaaatcctattgattcatcactactaa 585 |||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||| | | Sbjct: 818 ccttcgccatcctcatctggattggtagaggagaaaatcctattgattcatctctattga 877 Query: 586 aaagggtttatttggatgtattttcagtagttgttcttatacttggcggtgctctggcat 645 |||||||||| ||||||||||| ||||||||||||||| ||||||| ||||| ||||||| Sbjct: 878 aaagggtttacttggatgtattctcagtagttgttcttgtacttggtggtgcgctggcat 937 Query: 646 gttatggcgcattgttattctcgaagatgagcaaagtacgttctgaaactgtatcaactg 705 ||||||| ||| | |||| || |||||||||||||| ||||||||||||| |||| ||| Sbjct: 938 gttatggtgcaatactattttcaaagatgagcaaagtgcgttctgaaactggatcatctg 997 Query: 706 agaagaggaaggttgccagtttagctgctgtctcactgatttgtttctcgtcttctgctg 765 ||||| |||||||||| ||||||||| |||| |||||||||||||||||||| || ||| Sbjct: 998 agaagcggaaggttgcaagtttagctactgtgtcactgatttgtttctcgtcgtccgcta 1057 Query: 766 tactagcacttgttactaatgttccagtgcttttgtattggtactcgacagatgcggaca 825 |||||||||||||||| ||||||||||||||| ||||||||||||| |||||| ||| Sbjct: 1058 tactagcacttgttaccaatgttccagtgcttgtgtattggtactcagcagatgaataca 1117 Query: 826 tcatcaacaatgctgttatattgtttttatattattcaataggctcgtcagtgccgtccg 885 |||||||||||||| | ||||||||| | || |||| ||||| || || | ||||| | Sbjct: 1118 tcatcaacaatgctatcatattgtttatgtactatttcataggatcatccataccgtcag 1177 Query: 886 gatttgttttatgggtcatgagagagatgcctcatcggcacacagtagaaagacccacac 945 |||||||| |||||||||||| ||| || ||||||||||| ||||||||||| ||||||| Sbjct: 1178 gatttgttctatgggtcatgaaagatattcctcatcggcagacagtagaaaggcccacac 1237 Query: 946 aatcaagagttgttactttgttcagggacagaccatccgctacacaggatccgcagtgga 1005 ||||||||||||||| |||||||||||| ||||||||| ||||||||||||| || |||| Sbjct: 1238 aatcaagagttgttattttgttcagggatagaccatcccctacacaggatccacaatgga 1297 Query: 1006 gaactgctgttacatcctctaacaaggctctcaaatcaagcccaatttaatctaaagaca 1065 | ||||| |||||||||||||||||||| ||||| |||||||| |||||| | |||||| Sbjct: 1298 ggactgccgttacatcctctaacaaggccctcaagtcaagccctatttaaccagaagaca 1357 Query: 1066 aatcattgacgtggaaa 1082 || | |||| ||||||| Sbjct: 1358 aaccgttgatgtggaaa 1374 Score = 105 bits (53), Expect = 5e-19 Identities = 162/194 (83%), Gaps = 7/194 (3%) Strand = Plus / Plus Query: 1181 agatggatctgtaattcctactttcaaggtgattttagtgat--ggaaacaatggaatta 1238 |||||||| |||||||||||||| ||||| | ||||||||| | ||| || ||||||| Sbjct: 1462 agatggatatgtaattcctactt-caaggaaactttagtgatcagaaaagaagggaatta 1520 Query: 1239 cttgtggatgtagcaaggttctcaatgaaggagtgcacactatgcgtttatccagtagaa 1298 | |||| |||||||| ||||||| | | ||||||||| |||||||||||||| ||||| Sbjct: 1521 cctgtgaatgtagcatggttctcca---atgagtgcacagtatgcgtttatccattagaa 1577 Query: 1299 ctgaggttgggtaaggtttgaagcagtaacaaatgtaaatagccatagaaatgag-tatt 1357 | | ||||||||| || ||| | ||||||||||||||||||||||||||||| || Sbjct: 1578 ttaactctgggtaaggctttaaggattaacaaatgtaaatagccatagaaatgagagttt 1637 Query: 1358 ttcatggtttggct 1371 |||||||||||||| Sbjct: 1638 ttcatggtttggct 1651 >gb|AY110760.1| Zea mays CL34954_1 mRNA sequence Length = 657 Score = 285 bits (144), Expect = 3e-73 Identities = 171/180 (95%) Strand = Plus / Minus Query: 658 tgttattctcgaagatgagcaaagtacgttctgaaactgtatcaactgagaagaggaagg 717 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 655 tgttattctcgaagatgagcaaagttcgttctgaaactgtatcaactgagaagtggaagg 596 Query: 718 ttgccagtttagctgctgtctcactgatttgtttctcgtcttctgctgtactagcacttg 777 |||||||||||||||||||||| ||||| |||||||||||||||||| |||| ||||||| Sbjct: 595 ttgccagtttagctgctgtctcgctgatctgtttctcgtcttctgctatacttgcacttg 536 Query: 778 ttactaatgttccagtgcttttgtattggtactcgacagatgcggacatcatcaacaatg 837 | |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 535 tgactaatgttccagtgcttttgtattggtactcaacagatgtggacatcatcaacaatg 476 Score = 182 bits (92), Expect = 3e-42 Identities = 176/204 (86%) Strand = Plus / Minus Query: 864 ataggctcgtcagtgccgtccggatttgttttatgggtcatgagagagatgcctcatcgg 923 ||||||||||||||||| || ||||||||| ||||| ||||||||||||||||||||||| Sbjct: 449 ataggctcgtcagtgccatcaggatttgttctatggatcatgagagagatgcctcatcgg 390 Query: 924 cacacagtagaaagacccacacaatcaagagttgttactttgttcagggacagaccatcc 983 || ||| |||||| || | |||| || || ||||||||||||||||| |||||||| Sbjct: 389 caggtagttgaaagatccgtagaatcgagggtggttactttgttcagggaaagaccatca 330 Query: 984 gctacacaggatccgcagtggagaactgctgttacatcctctaacaaggctctcaaatca 1043 |||| |||||||| |||||||| || ||||| |||||||| |||||||| ||||| ||| Sbjct: 329 actacgcaggatccacagtggaggacagctgtcacatcctcaaacaaggccctcaagtca 270 Query: 1044 agcccaatttaatctaaagacaaa 1067 |||||||||||| || |||||||| Sbjct: 269 agcccaatttaacctgaagacaaa 246 >emb|CT834583.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA052J08, full insert sequence Length = 1009 Score = 244 bits (123), Expect = 9e-61 Identities = 216/247 (87%) Strand = Plus / Plus Query: 346 caaatgatgaagatgaagatgatgtaaggagtgatcatgaagctttattagacagaacaa 405 |||| |||||||||||||| ||| |||||| | ||||| |||||| | || ||||||| Sbjct: 614 caaacgatgaagatgaagaggatacgaggagtcaccatgaggctttactggatagaacaa 673 Query: 406 aaactaaacctggcttccgtcctgttgatgtccgtcgaaggtgttgctcagcaatacagc 465 ||| |||||||||| ||||| |||||||||| || || ||||||||| ||| | |||||| Sbjct: 674 aaaataaacctggcatccgtgctgttgatgttcgccggaggtgttgcccaggagtacagc 733 Query: 466 ttggaagccgccaaaaaattgtgattttggtgcttgtactgtcatttgttgttatgttcg 525 |||||||||| |||||| ||||||||||||||||| |||||||||||||||||| ||| Sbjct: 734 ttggaagccggcaaaaatttgtgattttggtgcttctactgtcatttgttgttacaatcg 793 Query: 526 cctttgccatcctcatctgggttggtagaggagaaaatcctattgattcatcactactaa 585 |||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||| | | Sbjct: 794 ccttcgccatcctcatctggattggtagaggagaaaatcctattgattcatctctattga 853 Query: 586 aaagggt 592 ||||||| Sbjct: 854 aaagggt 860 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 194 bits (98), Expect = 7e-46 Identities = 140/154 (90%) Strand = Plus / Plus Query: 879 ccgtccggatttgttttatgggtcatgagagagatgcctcatcggcacacagtagaaaga 938 ||||| ||||||||| |||||||||||| ||| || ||||||||||| ||||||||||| Sbjct: 31512151 ccgtcaggatttgttctatgggtcatgaaagatattcctcatcggcagacagtagaaagg 31512210 Query: 939 cccacacaatcaagagttgttactttgttcagggacagaccatccgctacacaggatccg 998 |||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| Sbjct: 31512211 cccacacaatcaagagttgttattttgttcagggatagaccatcccctacacaggatcca 31512270 Query: 999 cagtggagaactgctgttacatcctctaacaagg 1032 || ||||| ||||| ||||||||||||||||||| Sbjct: 31512271 caatggaggactgccgttacatcctctaacaagg 31512304 Score = 125 bits (63), Expect = 6e-25 Identities = 129/151 (85%) Strand = Plus / Plus Query: 346 caaatgatgaagatgaagatgatgtaaggagtgatcatgaagctttattagacagaacaa 405 |||| |||||||||||||| ||| |||||| | ||||| |||||| | || ||||||| Sbjct: 31508970 caaacgatgaagatgaagaggatacgaggagtcaccatgaggctttactggatagaacaa 31509029 Query: 406 aaactaaacctggcttccgtcctgttgatgtccgtcgaaggtgttgctcagcaatacagc 465 ||| |||||||||| ||||| |||||||||| || || ||||||||| ||| | |||||| Sbjct: 31509030 aaaataaacctggcatccgtgctgttgatgttcgccggaggtgttgcccaggagtacagc 31509089 Query: 466 ttggaagccgccaaaaaattgtgattttggt 496 |||||||||| |||||| ||||||||||||| Sbjct: 31509090 ttggaagccggcaaaaatttgtgattttggt 31509120 Score = 125 bits (63), Expect = 6e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 494 ggtgcttgtactgtcatttgttgttatgttcgcctttgccatcctcatctgggttggtag 553 ||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 31509310 ggtgcttctactgtcatttgttgttacaatcgccttcgccatcctcatctggattggtag 31509369 Query: 554 aggagaaaatcctattgattcatcactactaaaaagggt 592 |||||||||||||||||||||||| ||| | |||||||| Sbjct: 31509370 aggagaaaatcctattgattcatctctattgaaaagggt 31509408 Score = 105 bits (53), Expect = 5e-19 Identities = 162/194 (83%), Gaps = 7/194 (3%) Strand = Plus / Plus Query: 1181 agatggatctgtaattcctactttcaaggtgattttagtgat--ggaaacaatggaatta 1238 |||||||| |||||||||||||| ||||| | ||||||||| | ||| || ||||||| Sbjct: 31512536 agatggatatgtaattcctactt-caaggaaactttagtgatcagaaaagaagggaatta 31512594 Query: 1239 cttgtggatgtagcaaggttctcaatgaaggagtgcacactatgcgtttatccagtagaa 1298 | |||| |||||||| ||||||| | | ||||||||| |||||||||||||| ||||| Sbjct: 31512595 cctgtgaatgtagcatggttctcca---atgagtgcacagtatgcgtttatccattagaa 31512651 Query: 1299 ctgaggttgggtaaggtttgaagcagtaacaaatgtaaatagccatagaaatgag-tatt 1357 | | ||||||||| || ||| | ||||||||||||||||||||||||||||| || Sbjct: 31512652 ttaactctgggtaaggctttaaggattaacaaatgtaaatagccatagaaatgagagttt 31512711 Query: 1358 ttcatggtttggct 1371 |||||||||||||| Sbjct: 31512712 ttcatggtttggct 31512725 Score = 101 bits (51), Expect = 8e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 715 aggttgccagtttagctgctgtctcactgatttgtttctcgtcttctgctgtactagcac 774 ||||||| ||||||||| |||| |||||||||||||||||||| || ||| ||||||||| Sbjct: 31511102 aggttgcaagtttagctactgtgtcactgatttgtttctcgtcgtccgctatactagcac 31511161 Query: 775 ttgttactaatgttccagt 793 ||||||| ||||||||||| Sbjct: 31511162 ttgttaccaatgttccagt 31511180 Score = 85.7 bits (43), Expect = 5e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 590 ggtttatttggatgtattttcagtagttgttcttatacttggcggtgctctggcatgtta 649 |||||| ||||||||||| ||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 31510036 ggtttacttggatgtattctcagtagttgttcttgtacttggtggtgcgctggcatgtta 31510095 Query: 650 tgg 652 ||| Sbjct: 31510096 tgg 31510098