BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem210n20 (2075 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 244 1e-60 dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic D... 244 1e-60 ref|NM_001048670.1| Oryza sativa (japonica cultivar-group) Os01g... 167 2e-37 dbj|AK061054.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 2e-37 ref|NM_001061296.1| Oryza sativa (japonica cultivar-group) Os05g... 107 2e-19 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 244 bits (123), Expect = 1e-60 Identities = 210/239 (87%) Strand = Plus / Minus Query: 937 gacccgaccatgtttgaggcattctggagggacacaggggacgcggctgagatcgtcatc 996 |||||||||||||| |||| ||||||||||| || || |||||||| ||| |||||||| Sbjct: 3580091 gacccgaccatgttcgaggagttctggagggagaccggcgacgcggcggaggtcgtcatc 3580032 Query: 997 ccggggtggcagtcgatgagctacttctccgatgtcagcaacgtctgctggttcctcgag 1056 |||||||||||| ||||||||||||||||||| || | |||||||||||||||||||||| Sbjct: 3580031 ccggggtggcagacgatgagctacttctccgacgtgaccaacgtctgctggttcctcgag 3579972 Query: 1057 ccggagttcgaccagcaggtgcgccgcctccaccggctggtcggcaacgcggcggtggac 1116 |||||| |||||| |||||||||||||||||||| | ||||||||||| || || ||| Sbjct: 3579971 ccggagctcgaccgccaggtgcgccgcctccaccgagtcgtcggcaacgccgccgtcgac 3579912 Query: 1117 gggtatcatgtcctggtcggcaccggctccatgcagctcttcatggcggccctctacgc 1175 || || || ||||| |||||||||||||||| |||||||||||||| || |||||||| Sbjct: 3579911 ggctaccacgtcctcgtcggcaccggctccacccagctcttcatggccgcgctctacgc 3579853 Score = 123 bits (62), Expect = 3e-24 Identities = 119/138 (86%) Strand = Plus / Minus Query: 1236 gtcatatcctgcggtgacggatttcctccgatctgggctcttccgttgggccggggatgc 1295 |||||| || || |||||||| |||||||| || ||||||||||| |||||||| || || Sbjct: 3578179 gtcataccccgccgtgacggacttcctccggtcggggctcttccggtgggccggcgacgc 3578120 Query: 1296 caactcgttcaagggagacaactacattgagctggtttgctccccaaacaatcccgacgg 1355 | || | ||||| || ||| ||||||||||||||| |||||||| |||||||| ||||| Sbjct: 3578119 cgacgccttcaaaggcgactcctacattgagctggtctgctccccgaacaatcctgacgg 3578060 Query: 1356 cgccatccgtgaagctgt 1373 |||||||||||||||||| Sbjct: 3578059 cgccatccgtgaagctgt 3578042 Score = 115 bits (58), Expect = 7e-22 Identities = 109/126 (86%) Strand = Plus / Minus Query: 1671 tcgcctgttcgactttgggcgacgccaaatggtggagcgctggaagatgctgcgcgcagc 1730 |||||||||||||||||| |||||| | ||||||||||| |||| ||||| ||||| || Sbjct: 3577621 tcgcctgttcgactttggtcgacgcaagatggtggagcggtggagcatgctccgcgctgc 3577562 Query: 1731 cgcagccgcctcgggcattttcagcctgcctgaggagacttcaggctactgcaacttcac 1790 || |||||||| ||||| |||||||| || |||||||| || |||| |||||||||||| Sbjct: 3577561 tgccgccgcctccggcatcttcagcctcccggaggagacctccggcttctgcaacttcac 3577502 Query: 1791 caagga 1796 |||||| Sbjct: 3577501 caagga 3577496 Score = 111 bits (56), Expect = 1e-20 Identities = 77/84 (91%) Strand = Plus / Minus Query: 650 ccatgccgctctggcgcgtcgccgtcttcgcctccgtcgcgttgaacgtcgccacactcg 709 |||||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||| Sbjct: 3580678 ccatgccgctgtggcgcgtcgcggtgttcgcctccgtcgcattgaacgtcgccaccctcg 3580619 Query: 710 ccctcctgctccaccactacgcca 733 | ||||| |||||||||||||||| Sbjct: 3580618 cactcctcctccaccactacgcca 3580595 Score = 83.8 bits (42), Expect = 3e-12 Identities = 90/106 (84%) Strand = Plus / Minus Query: 1514 ggtgggcgttggtgaaggaccgtgacattgcgcagaagatgaccaagttcattgagctca 1573 |||||||||||||||||||||| | || ||| ||||||||| ||||| | ||||| | Sbjct: 3577796 ggtgggcgttggtgaaggaccgggcgatcgcgaggaagatgacgaagtttgtggagctga 3577737 Query: 1574 acaccattggggtgtccaaggactcgcagctgcgcgctgccaaggt 1619 |||| || ||||||||||||||||||||| |||| || |||||||| Sbjct: 3577736 acacgatcggggtgtccaaggactcgcagatgcgggcggccaaggt 3577691 Score = 81.8 bits (41), Expect = 1e-11 Identities = 83/97 (85%) Strand = Plus / Minus Query: 1906 cagttcggtgcggatccgaggtacgtccggatcagcatgctcgacagggatgacgccttc 1965 |||||||| |||||| |||||||||| ||| | ||||||||||||||||| ||||| ||| Sbjct: 3577084 cagttcggggcggatgcgaggtacgtgcgggtgagcatgctcgacagggacgacgcgttc 3577025 Query: 1966 gacatctttgtaaagcgcctgtcctctctcaagtgaa 2002 |||||||| | || ||||| || || |||||||||| Sbjct: 3577024 gacatcttcatcaaccgcctctcgtcgctcaagtgaa 3576988 >dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 244 bits (123), Expect = 1e-60 Identities = 210/239 (87%) Strand = Plus / Minus Query: 937 gacccgaccatgtttgaggcattctggagggacacaggggacgcggctgagatcgtcatc 996 |||||||||||||| |||| ||||||||||| || || |||||||| ||| |||||||| Sbjct: 148159 gacccgaccatgttcgaggagttctggagggagaccggcgacgcggcggaggtcgtcatc 148100 Query: 997 ccggggtggcagtcgatgagctacttctccgatgtcagcaacgtctgctggttcctcgag 1056 |||||||||||| ||||||||||||||||||| || | |||||||||||||||||||||| Sbjct: 148099 ccggggtggcagacgatgagctacttctccgacgtgaccaacgtctgctggttcctcgag 148040 Query: 1057 ccggagttcgaccagcaggtgcgccgcctccaccggctggtcggcaacgcggcggtggac 1116 |||||| |||||| |||||||||||||||||||| | ||||||||||| || || ||| Sbjct: 148039 ccggagctcgaccgccaggtgcgccgcctccaccgagtcgtcggcaacgccgccgtcgac 147980 Query: 1117 gggtatcatgtcctggtcggcaccggctccatgcagctcttcatggcggccctctacgc 1175 || || || ||||| |||||||||||||||| |||||||||||||| || |||||||| Sbjct: 147979 ggctaccacgtcctcgtcggcaccggctccacccagctcttcatggccgcgctctacgc 147921 Score = 123 bits (62), Expect = 3e-24 Identities = 119/138 (86%) Strand = Plus / Minus Query: 1236 gtcatatcctgcggtgacggatttcctccgatctgggctcttccgttgggccggggatgc 1295 |||||| || || |||||||| |||||||| || ||||||||||| |||||||| || || Sbjct: 146247 gtcataccccgccgtgacggacttcctccggtcggggctcttccggtgggccggcgacgc 146188 Query: 1296 caactcgttcaagggagacaactacattgagctggtttgctccccaaacaatcccgacgg 1355 | || | ||||| || ||| ||||||||||||||| |||||||| |||||||| ||||| Sbjct: 146187 cgacgccttcaaaggcgactcctacattgagctggtctgctccccgaacaatcctgacgg 146128 Query: 1356 cgccatccgtgaagctgt 1373 |||||||||||||||||| Sbjct: 146127 cgccatccgtgaagctgt 146110 Score = 115 bits (58), Expect = 7e-22 Identities = 109/126 (86%) Strand = Plus / Minus Query: 1671 tcgcctgttcgactttgggcgacgccaaatggtggagcgctggaagatgctgcgcgcagc 1730 |||||||||||||||||| |||||| | ||||||||||| |||| ||||| ||||| || Sbjct: 145689 tcgcctgttcgactttggtcgacgcaagatggtggagcggtggagcatgctccgcgctgc 145630 Query: 1731 cgcagccgcctcgggcattttcagcctgcctgaggagacttcaggctactgcaacttcac 1790 || |||||||| ||||| |||||||| || |||||||| || |||| |||||||||||| Sbjct: 145629 tgccgccgcctccggcatcttcagcctcccggaggagacctccggcttctgcaacttcac 145570 Query: 1791 caagga 1796 |||||| Sbjct: 145569 caagga 145564 Score = 111 bits (56), Expect = 1e-20 Identities = 77/84 (91%) Strand = Plus / Minus Query: 650 ccatgccgctctggcgcgtcgccgtcttcgcctccgtcgcgttgaacgtcgccacactcg 709 |||||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||| Sbjct: 148746 ccatgccgctgtggcgcgtcgcggtgttcgcctccgtcgcattgaacgtcgccaccctcg 148687 Query: 710 ccctcctgctccaccactacgcca 733 | ||||| |||||||||||||||| Sbjct: 148686 cactcctcctccaccactacgcca 148663 Score = 83.8 bits (42), Expect = 3e-12 Identities = 90/106 (84%) Strand = Plus / Minus Query: 1514 ggtgggcgttggtgaaggaccgtgacattgcgcagaagatgaccaagttcattgagctca 1573 |||||||||||||||||||||| | || ||| ||||||||| ||||| | ||||| | Sbjct: 145864 ggtgggcgttggtgaaggaccgggcgatcgcgaggaagatgacgaagtttgtggagctga 145805 Query: 1574 acaccattggggtgtccaaggactcgcagctgcgcgctgccaaggt 1619 |||| || ||||||||||||||||||||| |||| || |||||||| Sbjct: 145804 acacgatcggggtgtccaaggactcgcagatgcgggcggccaaggt 145759 Score = 81.8 bits (41), Expect = 1e-11 Identities = 83/97 (85%) Strand = Plus / Minus Query: 1906 cagttcggtgcggatccgaggtacgtccggatcagcatgctcgacagggatgacgccttc 1965 |||||||| |||||| |||||||||| ||| | ||||||||||||||||| ||||| ||| Sbjct: 145152 cagttcggggcggatgcgaggtacgtgcgggtgagcatgctcgacagggacgacgcgttc 145093 Query: 1966 gacatctttgtaaagcgcctgtcctctctcaagtgaa 2002 |||||||| | || ||||| || || |||||||||| Sbjct: 145092 gacatcttcatcaaccgcctctcgtcgctcaagtgaa 145056 >ref|NM_001048670.1| Oryza sativa (japonica cultivar-group) Os01g0169800 (Os01g0169800) mRNA, partial cds Length = 1162 Score = 167 bits (84), Expect = 2e-37 Identities = 270/332 (81%) Strand = Plus / Plus Query: 1671 tcgcctgttcgactttgggcgacgccaaatggtggagcgctggaagatgctgcgcgcagc 1730 |||||||||||||||||| |||||| | ||||||||||| |||| ||||| ||||| || Sbjct: 316 tcgcctgttcgactttggtcgacgcaagatggtggagcggtggagcatgctccgcgctgc 375 Query: 1731 cgcagccgcctcgggcattttcagcctgcctgaggagacttcaggctactgcaacttcac 1790 || |||||||| ||||| |||||||| || |||||||| || |||| |||||||||||| Sbjct: 376 tgccgccgcctccggcatcttcagcctcccggaggagacctccggcttctgcaacttcac 435 Query: 1791 caaggaaatggcgtcgactaatcctgcattcgcgtggctgcgctgcgacagggaagacgt 1850 |||||| | || |||| || ||||| |||||||||||||| ||||| ||||| || || Sbjct: 436 caaggagaccgccgcgaccaaccctgcgttcgcgtggctgcggtgcgatagggaggatgt 495 Query: 1851 gcaagactgcgcgagcttccttcgcagccacaagatactgacccggagtggcagccagtt 1910 | | || || ||| | || || || | |||||||| ||||| |||| || ||||| Sbjct: 496 ggaggattgtgcggggtttctccgtgggcacaagatcctgacgaggagcggggcgcagtt 555 Query: 1911 cggtgcggatccgaggtacgtccggatcagcatgctcgacagggatgacgccttcgacat 1970 ||| |||||| |||||||||| ||| | ||||||||||||||||| ||||| |||||||| Sbjct: 556 cggggcggatgcgaggtacgtgcgggtgagcatgctcgacagggacgacgcgttcgacat 615 Query: 1971 ctttgtaaagcgcctgtcctctctcaagtgaa 2002 ||| | || ||||| || || |||||||||| Sbjct: 616 cttcatcaaccgcctctcgtcgctcaagtgaa 647 Score = 135 bits (68), Expect = 8e-28 Identities = 182/220 (82%) Strand = Plus / Plus Query: 1400 tccatgactttgcatactactggccgcaatacacgcccatcactgaacaggctgaccatg 1459 |||||||| | || ||||||||||| || ||||| |||||||| | | ||| ||||| Sbjct: 27 tccatgacctggcctactactggcctcagtacacccccatcaccaagcgtgcttcccatg 86 Query: 1460 acataatgctcttcacggtgtcgaagagtacaggacatgctgggacgaggatcgggtggg 1519 |||| ||||||||||| || || ||||| || || ||||| ||||| ||||||||||||| Sbjct: 87 acatcatgctcttcaccgtctccaagagcaccggccatgccgggaccaggatcgggtggg 146 Query: 1520 cgttggtgaaggaccgtgacattgcgcagaagatgaccaagttcattgagctcaacacca 1579 |||||||||||||||| | || ||| ||||||||| ||||| | ||||| ||||| | Sbjct: 147 cgttggtgaaggaccgggcgatcgcgaggaagatgacgaagtttgtggagctgaacacga 206 Query: 1580 ttggggtgtccaaggactcgcagctgcgcgctgccaaggt 1619 | ||||||||||||||||||||| |||| || |||||||| Sbjct: 207 tcggggtgtccaaggactcgcagatgcgggcggccaaggt 246 >dbj|AK061054.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-H01, full insert sequence Length = 1162 Score = 167 bits (84), Expect = 2e-37 Identities = 270/332 (81%) Strand = Plus / Plus Query: 1671 tcgcctgttcgactttgggcgacgccaaatggtggagcgctggaagatgctgcgcgcagc 1730 |||||||||||||||||| |||||| | ||||||||||| |||| ||||| ||||| || Sbjct: 316 tcgcctgttcgactttggtcgacgcaagatggtggagcggtggagcatgctccgcgctgc 375 Query: 1731 cgcagccgcctcgggcattttcagcctgcctgaggagacttcaggctactgcaacttcac 1790 || |||||||| ||||| |||||||| || |||||||| || |||| |||||||||||| Sbjct: 376 tgccgccgcctccggcatcttcagcctcccggaggagacctccggcttctgcaacttcac 435 Query: 1791 caaggaaatggcgtcgactaatcctgcattcgcgtggctgcgctgcgacagggaagacgt 1850 |||||| | || |||| || ||||| |||||||||||||| ||||| ||||| || || Sbjct: 436 caaggagaccgccgcgaccaaccctgcgttcgcgtggctgcggtgcgatagggaggatgt 495 Query: 1851 gcaagactgcgcgagcttccttcgcagccacaagatactgacccggagtggcagccagtt 1910 | | || || ||| | || || || | |||||||| ||||| |||| || ||||| Sbjct: 496 ggaggattgtgcggggtttctccgtgggcacaagatcctgacgaggagcggggcgcagtt 555 Query: 1911 cggtgcggatccgaggtacgtccggatcagcatgctcgacagggatgacgccttcgacat 1970 ||| |||||| |||||||||| ||| | ||||||||||||||||| ||||| |||||||| Sbjct: 556 cggggcggatgcgaggtacgtgcgggtgagcatgctcgacagggacgacgcgttcgacat 615 Query: 1971 ctttgtaaagcgcctgtcctctctcaagtgaa 2002 ||| | || ||||| || || |||||||||| Sbjct: 616 cttcatcaaccgcctctcgtcgctcaagtgaa 647 Score = 135 bits (68), Expect = 8e-28 Identities = 182/220 (82%) Strand = Plus / Plus Query: 1400 tccatgactttgcatactactggccgcaatacacgcccatcactgaacaggctgaccatg 1459 |||||||| | || ||||||||||| || ||||| |||||||| | | ||| ||||| Sbjct: 27 tccatgacctggcctactactggcctcagtacacccccatcaccaagcgtgcttcccatg 86 Query: 1460 acataatgctcttcacggtgtcgaagagtacaggacatgctgggacgaggatcgggtggg 1519 |||| ||||||||||| || || ||||| || || ||||| ||||| ||||||||||||| Sbjct: 87 acatcatgctcttcaccgtctccaagagcaccggccatgccgggaccaggatcgggtggg 146 Query: 1520 cgttggtgaaggaccgtgacattgcgcagaagatgaccaagttcattgagctcaacacca 1579 |||||||||||||||| | || ||| ||||||||| ||||| | ||||| ||||| | Sbjct: 147 cgttggtgaaggaccgggcgatcgcgaggaagatgacgaagtttgtggagctgaacacga 206 Query: 1580 ttggggtgtccaaggactcgcagctgcgcgctgccaaggt 1619 | ||||||||||||||||||||| |||| || |||||||| Sbjct: 207 tcggggtgtccaaggactcgcagatgcgggcggccaaggt 246 >ref|NM_001061296.1| Oryza sativa (japonica cultivar-group) Os05g0169300 (Os05g0169300) mRNA, complete cds Length = 1680 Score = 107 bits (54), Expect = 2e-19 Identities = 162/198 (81%) Strand = Plus / Plus Query: 987 gatcgtcatcccggggtggcagtcgatgagctacttctccgatgtcagcaacgtctgctg 1046 |||||| ||||||||||||||| ||||||||||||||||||| || ||| | | ||||| Sbjct: 356 gatcgtgatcccggggtggcagacgatgagctacttctccgacgtgggcagcctgtgctg 415 Query: 1047 gttcctcgagccggagttcgaccagcaggtgcgccgcctccaccggctggtcggcaacgc 1106 |||||| ||||| | ||| || | | ||||||||||||||||||| || ||||||||||| Sbjct: 416 gttcctggagcccgggttggagcgggaggtgcgccgcctccaccgcctcgtcggcaacgc 475 Query: 1107 ggcggtggacgggtatcatgtcctggtcggcaccggctccatgcagctcttcatggcggc 1166 | | ||||| || || || || ||||||||||| |||| ||||||||| ||| || Sbjct: 476 cgtcgccgacggctaccacgtgctcgtcggcaccggatccacccagctcttccaggccgc 535 Query: 1167 cctctacgcgctgtcgcc 1184 |||||||| || ||||| Sbjct: 536 gctctacgccctctcgcc 553 Score = 107 bits (54), Expect = 2e-19 Identities = 99/114 (86%) Strand = Plus / Plus Query: 1511 tcgggtgggcgttggtgaaggaccgtgacattgcgcagaagatgaccaagttcattgagc 1570 ||||||||||| ||||||||||| | | | ||||||||||||| ||||||||| |||| Sbjct: 880 tcgggtgggcgctggtgaaggacagggcggtggcgcagaagatgagcaagttcatcgagc 939 Query: 1571 tcaacaccattggggtgtccaaggactcgcagctgcgcgctgccaaggtcctca 1624 |||||||||| || || ||||||||||||||||| ||||| |||||| |||||| Sbjct: 940 tcaacaccatcggcgtctccaaggactcgcagctccgcgccgccaagatcctca 993