BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem210i07 (1481 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001070293.1| Oryza sativa (japonica cultivar-group) Os09g... 837 0.0 dbj|AK105810.1| Oryza sativa (japonica cultivar-group) cDNA clon... 837 0.0 gb|AY850134.1| Oryza sativa (japonica cultivar-group) senescence... 837 0.0 gb|AY850135.1| Hordeum vulgare senescence-inducible chloroplast ... 650 0.0 gb|AY850139.1| Zea mays senescence-inducible chloroplast stay-gr... 593 e-166 >ref|NM_001070293.1| Oryza sativa (japonica cultivar-group) Os09g0532000 (Os09g0532000) mRNA, complete cds Length = 1376 Score = 837 bits (422), Expect = 0.0 Identities = 511/541 (94%), Gaps = 6/541 (1%) Strand = Plus / Plus Query: 424 tacgtcgcgccgacggcgaggctgttcgggccggcgatcttcgaggcgtcgaagctgaag 483 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 tacgtcgtgccgagggcgaggctgttcgggccggcgatcttcgaggcgtcgaagctgaag 439 Query: 484 gtgctgttcctgggggtggacgaggagaagcacc------cgggaaagctgccgcggacg 537 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 440 gtgctgttcctgggggtggacgaggagaagcaccagcacccggggaagctgccgcggacg 499 Query: 538 tacacgctgacgcacagcgacgtgacggcgaggctgacgctggccgtgtcgcacaccatc 597 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 500 tacacgctgacgcacagcgacgtgacggcgaggctgacgctggcggtgtcgcacaccatc 559 Query: 598 aaccgcgcgcagctgcaggggtggtacaacaagctgcagcgcgacgaggtggtggccgag 657 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 560 aaccgggcgcagctgcaggggtggtacaacaagctgcagcgggacgaggtggtggcggag 619 Query: 658 tggaagaaggtgcagggcaggatgtcgctgcacgtccactgccacatctccggcggccac 717 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 620 tggaagaaggtgcagggccacatgtcgctgcacgtccactgccacatctccggcggccac 679 Query: 718 ttcctcctcgacctcatcgccggcctccgctactacatctttcgcaaggagctccccgtg 777 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 680 gtcctcctcgacctcatcgccggcctccgctactacatcttccgcaaggagctccccgtg 739 Query: 778 gttctgaaggcgttcgtgcacggcgacggcaacctgttcaacaggcacccggagctggag 837 ||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||| Sbjct: 740 gttctgaaggcgttcgtccacggcgacggcaacctgttcagccggcacccggagctggag 799 Query: 838 gaggccacggtgtgggtctacttccactccaacctcccccgcttcaaccgcgtcgactgc 897 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 800 gaggccacggtgtgggtctacttccactccaacctcccacgcttcaaccgcgtcgagtgc 859 Query: 898 tggggcccgctccgcgacgccgccgcgccggccgaggacgacgacaccgccgccgacgcg 957 |||||||||||||||||||||| |||||| ||||||| |||||| ||| ||||| |||| Sbjct: 860 tggggcccgctccgcgacgccggagcgccgcccgaggaagacgacgccgtcgccgccgcg 919 Query: 958 g 958 | Sbjct: 920 g 920 Score = 139 bits (70), Expect = 4e-29 Identities = 99/108 (91%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 955 gcggaggagcagatgcccgcgg---gcgagtggccgcagcggtgccccgggcagtgcgac 1011 |||| ||||||||||||||||| |||||||||||| ||||||||| |||||||||||| Sbjct: 935 gcggcggagcagatgcccgcggccggcgagtggccgcggcggtgcccggggcagtgcgac 994 Query: 1012 tgctgcttcccaccctacagcctcatcccctggccgcacgagcacgac 1059 ||||||||||| || |||||||||||||||||||||||| |||||||| Sbjct: 995 tgctgcttcccgccatacagcctcatcccctggccgcaccagcacgac 1042 >dbj|AK105810.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B12, full insert sequence Length = 1376 Score = 837 bits (422), Expect = 0.0 Identities = 511/541 (94%), Gaps = 6/541 (1%) Strand = Plus / Plus Query: 424 tacgtcgcgccgacggcgaggctgttcgggccggcgatcttcgaggcgtcgaagctgaag 483 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 tacgtcgtgccgagggcgaggctgttcgggccggcgatcttcgaggcgtcgaagctgaag 439 Query: 484 gtgctgttcctgggggtggacgaggagaagcacc------cgggaaagctgccgcggacg 537 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 440 gtgctgttcctgggggtggacgaggagaagcaccagcacccggggaagctgccgcggacg 499 Query: 538 tacacgctgacgcacagcgacgtgacggcgaggctgacgctggccgtgtcgcacaccatc 597 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 500 tacacgctgacgcacagcgacgtgacggcgaggctgacgctggcggtgtcgcacaccatc 559 Query: 598 aaccgcgcgcagctgcaggggtggtacaacaagctgcagcgcgacgaggtggtggccgag 657 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 560 aaccgggcgcagctgcaggggtggtacaacaagctgcagcgggacgaggtggtggcggag 619 Query: 658 tggaagaaggtgcagggcaggatgtcgctgcacgtccactgccacatctccggcggccac 717 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 620 tggaagaaggtgcagggccacatgtcgctgcacgtccactgccacatctccggcggccac 679 Query: 718 ttcctcctcgacctcatcgccggcctccgctactacatctttcgcaaggagctccccgtg 777 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 680 gtcctcctcgacctcatcgccggcctccgctactacatcttccgcaaggagctccccgtg 739 Query: 778 gttctgaaggcgttcgtgcacggcgacggcaacctgttcaacaggcacccggagctggag 837 ||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||| Sbjct: 740 gttctgaaggcgttcgtccacggcgacggcaacctgttcagccggcacccggagctggag 799 Query: 838 gaggccacggtgtgggtctacttccactccaacctcccccgcttcaaccgcgtcgactgc 897 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 800 gaggccacggtgtgggtctacttccactccaacctcccacgcttcaaccgcgtcgagtgc 859 Query: 898 tggggcccgctccgcgacgccgccgcgccggccgaggacgacgacaccgccgccgacgcg 957 |||||||||||||||||||||| |||||| ||||||| |||||| ||| ||||| |||| Sbjct: 860 tggggcccgctccgcgacgccggagcgccgcccgaggaagacgacgccgtcgccgccgcg 919 Query: 958 g 958 | Sbjct: 920 g 920 Score = 139 bits (70), Expect = 4e-29 Identities = 99/108 (91%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 955 gcggaggagcagatgcccgcgg---gcgagtggccgcagcggtgccccgggcagtgcgac 1011 |||| ||||||||||||||||| |||||||||||| ||||||||| |||||||||||| Sbjct: 935 gcggcggagcagatgcccgcggccggcgagtggccgcggcggtgcccggggcagtgcgac 994 Query: 1012 tgctgcttcccaccctacagcctcatcccctggccgcacgagcacgac 1059 ||||||||||| || |||||||||||||||||||||||| |||||||| Sbjct: 995 tgctgcttcccgccatacagcctcatcccctggccgcaccagcacgac 1042 >gb|AY850134.1| Oryza sativa (japonica cultivar-group) senescence-inducible chloroplast stay-green protein (SGR) mRNA, complete cds; nuclear gene for chloroplast product Length = 1524 Score = 837 bits (422), Expect = 0.0 Identities = 511/541 (94%), Gaps = 6/541 (1%) Strand = Plus / Plus Query: 424 tacgtcgcgccgacggcgaggctgttcgggccggcgatcttcgaggcgtcgaagctgaag 483 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 tacgtcgtgccgagggcgaggctgttcgggccggcgatcttcgaggcgtcgaagctgaag 439 Query: 484 gtgctgttcctgggggtggacgaggagaagcacc------cgggaaagctgccgcggacg 537 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 440 gtgctgttcctgggggtggacgaggagaagcaccagcacccggggaagctgccgcggacg 499 Query: 538 tacacgctgacgcacagcgacgtgacggcgaggctgacgctggccgtgtcgcacaccatc 597 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 500 tacacgctgacgcacagcgacgtgacggcgaggctgacgctggcggtgtcgcacaccatc 559 Query: 598 aaccgcgcgcagctgcaggggtggtacaacaagctgcagcgcgacgaggtggtggccgag 657 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 560 aaccgggcgcagctgcaggggtggtacaacaagctgcagcgggacgaggtggtggcggag 619 Query: 658 tggaagaaggtgcagggcaggatgtcgctgcacgtccactgccacatctccggcggccac 717 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 620 tggaagaaggtgcagggccacatgtcgctgcacgtccactgccacatctccggcggccac 679 Query: 718 ttcctcctcgacctcatcgccggcctccgctactacatctttcgcaaggagctccccgtg 777 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 680 gtcctcctcgacctcatcgccggcctccgctactacatcttccgcaaggagctccccgtg 739 Query: 778 gttctgaaggcgttcgtgcacggcgacggcaacctgttcaacaggcacccggagctggag 837 ||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||| Sbjct: 740 gttctgaaggcgttcgtccacggcgacggcaacctgttcagccggcacccggagctggag 799 Query: 838 gaggccacggtgtgggtctacttccactccaacctcccccgcttcaaccgcgtcgactgc 897 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 800 gaggccacggtgtgggtctacttccactccaacctcccacgcttcaaccgcgtcgagtgc 859 Query: 898 tggggcccgctccgcgacgccgccgcgccggccgaggacgacgacaccgccgccgacgcg 957 |||||||||||||||||||||| |||||| ||||||| |||||| ||| ||||| |||| Sbjct: 860 tggggcccgctccgcgacgccggagcgccgcccgaggaagacgacgccgtcgccgccgcg 919 Query: 958 g 958 | Sbjct: 920 g 920 Score = 139 bits (70), Expect = 4e-29 Identities = 99/108 (91%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 955 gcggaggagcagatgcccgcgg---gcgagtggccgcagcggtgccccgggcagtgcgac 1011 |||| ||||||||||||||||| |||||||||||| ||||||||| |||||||||||| Sbjct: 935 gcggcggagcagatgcccgcggccggcgagtggccgcggcggtgcccggggcagtgcgac 994 Query: 1012 tgctgcttcccaccctacagcctcatcccctggccgcacgagcacgac 1059 ||||||||||| || |||||||||||||||||||||||| |||||||| Sbjct: 995 tgctgcttcccgccatacagcctcatcccctggccgcaccagcacgac 1042 >gb|AY850135.1| Hordeum vulgare senescence-inducible chloroplast stay-green protein (SGR) mRNA, complete cds; nuclear gene for chloroplast product Length = 1584 Score = 650 bits (328), Expect = 0.0 Identities = 463/508 (91%) Strand = Plus / Plus Query: 419 ggcgatacgtcgcgccgacggcgaggctgttcgggccggcgatcttcgaggcgtcgaagc 478 ||||| |||||| ||||| |||| ||||||| || ||||| |||||||||||||| |||| Sbjct: 453 ggcgacacgtcgtgccgagggcgcggctgtttggtccggccatcttcgaggcgtccaagc 512 Query: 479 tgaaggtgctgttcctgggggtggacgaggagaagcacccgggaaagctgccgcggacgt 538 | |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 513 tcaaggtgctgttcgtgggggtggacgaggagaagcacccggggaagctgccccggacct 572 Query: 539 acacgctgacgcacagcgacgtgacggcgaggctgacgctggccgtgtcgcacaccatca 598 ||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 573 acacgctcacccacagcgacgtgacggcgcggctgacgctggccgtgtcgcacaccatcc 632 Query: 599 accgcgcgcagctgcaggggtggtacaacaagctgcagcgcgacgaggtggtggccgagt 658 || ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| Sbjct: 633 acgccgcgcagctgcagggctggtacaaccgcctgcagcgggacgaggtggtggccgagt 692 Query: 659 ggaagaaggtgcagggcaggatgtcgctgcacgtccactgccacatctccggcggccact 718 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 693 ggaagaaggtgcagggcgccatgtcgctgcacgtccactgccacatctccggcggccact 752 Query: 719 tcctcctcgacctcatcgccggcctccgctactacatctttcgcaaggagctccccgtgg 778 |||| |||||||||||||| ||||||||||||||||| |||||||||||| |||||| Sbjct: 753 tcctgctcgacctcatcgcgccgctccgctactacatcttccgcaaggagctctccgtgg 812 Query: 779 ttctgaaggcgttcgtgcacggcgacggcaacctgttcaacaggcacccggagctggagg 838 |||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 813 ttctgaaggcgttcgtgcacggcgacggcagcctgttcagccagcacccggagctggagg 872 Query: 839 aggccacggtgtgggtctacttccactccaacctcccccgcttcaaccgcgtcgactgct 898 |||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||| Sbjct: 873 aggccacggtgtgggtctacttccactcgaacaaccccaacttcaaccgcgtcgagtgct 932 Query: 899 ggggcccgctccgcgacgccgccgcgcc 926 ||||||||||| |||||||||||||||| Sbjct: 933 ggggcccgctcagcgacgccgccgcgcc 960 Score = 119 bits (60), Expect = 3e-23 Identities = 84/92 (91%) Strand = Plus / Plus Query: 972 cgcgggcgagtggccgcagcggtgccccgggcagtgcgactgctgcttcccaccctacag 1031 ||||||| ||||||||| ||||||||||||||||||||||||||||||||| || | | Sbjct: 1054 cgcgggccagtggccgcggcggtgccccgggcagtgcgactgctgcttcccgccggagtg 1113 Query: 1032 cctcatcccctggccgcacgagcacgacatgg 1063 ||||||||||||||||||||||||||| |||| Sbjct: 1114 cctcatcccctggccgcacgagcacgagatgg 1145 >gb|AY850139.1| Zea mays senescence-inducible chloroplast stay-green protein 2 (SGR2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1145 Score = 593 bits (299), Expect = e-166 Identities = 386/415 (93%) Strand = Plus / Plus Query: 525 gctgccgcggacgtacacgctgacgcacagcgacgtgacggcgaggctgacgctggccgt 584 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 423 gctgccgcggacgtacacgctgacgcacagcgacgtgacggccaggctgacgctcgccgt 482 Query: 585 gtcgcacaccatcaaccgcgcgcagctgcaggggtggtacaacaagctgcagcgcgacga 644 |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 483 ctcgcacaccatcaaccgcgcgcagctgcagggctggtacaaccgcctgcagcgcgacga 542 Query: 645 ggtggtggccgagtggaagaaggtgcagggcaggatgtcgctgcacgtccactgccacat 704 |||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||| Sbjct: 543 ggtggtggccgagtggaagaaggtgcgcggccggatgtcgctgcacgtgcactgccacat 602 Query: 705 ctccggcggccacttcctcctcgacctcatcgccggcctccgctactacatctttcgcaa 764 |||||||||||||||||| |||||||||||||| |||||||||||| ||| || ||||| Sbjct: 603 ctccggcggccacttcctgctcgacctcatcgcgggcctccgctacgtcattttccgcaa 662 Query: 765 ggagctccccgtggttctgaaggcgttcgtgcacggcgacggcaacctgttcaacaggca 824 ||||||||||||||| || |||||||||||||||||||||||| ||||||||| | |||| Sbjct: 663 ggagctccccgtggtgctcaaggcgttcgtgcacggcgacggcgacctgttcagccggca 722 Query: 825 cccggagctggaggaggccacggtgtgggtctacttccactccaacctcccccgcttcaa 884 |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 723 cccggagctggaggaggccacggtgtgggtctacttccactccaacctggctcgcttcaa 782 Query: 885 ccgcgtcgactgctggggcccgctccgcgacgccgccgcgccggccgaggacgac 939 |||||| || |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 783 ccgcgtggagtgctggggtccgctccgcgacgccgccgcgcccgccgaggacgac 837 Score = 165 bits (83), Expect = 6e-37 Identities = 107/115 (93%) Strand = Plus / Plus Query: 392 ggcggcggcccaaggacgcgcggctgcggcgatacgtcgcgccgacggcgaggctgttcg 451 ||||||||||| || |||||||| | |||||||||||| ||||||||||||||||||| Sbjct: 281 ggcggcggccctgggtcgcgcggcggaggcgatacgtcgttccgacggcgaggctgttcg 340 Query: 452 ggccggcgatcttcgaggcgtcgaagctgaaggtgctgttcctgggggtggacga 506 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 341 ggccggcgatcttcgaggcgtcgaagctgaaggtgctgttcctgggcgtggacga 395 Score = 101 bits (51), Expect = 8e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 977 gcgagtggccgcagcggtgccccgggcagtgcgactgctgcttcccaccctacagcctca 1036 ||||||||||||| ||||| ||| |||||||| |||||||||||| || ||||||||| Sbjct: 896 gcgagtggccgcaccggtgtccccagcagtgcggctgctgcttcccgccgcacagcctca 955 Query: 1037 tcccctggccgcacgagcacgacatgg 1063 ||||||||||| ||||||||||||||| Sbjct: 956 tcccctggccgaacgagcacgacatgg 982