BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem210f12 (1468 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001048453.1| Oryza sativa (japonica cultivar-group) Os01g... 216 2e-52 ref|NM_001049704.1| Oryza sativa (japonica cultivar-group) Os01g... 168 4e-38 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 168 4e-38 dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic D... 168 4e-38 dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic D... 168 4e-38 >ref|NM_001048453.1| Oryza sativa (japonica cultivar-group) Os01g0129600 (Os01g0129600) mRNA, complete cds Length = 924 Score = 216 bits (109), Expect = 2e-52 Identities = 253/301 (84%) Strand = Plus / Plus Query: 195 tgagctgcaacgggtgccgcgtgctaaggaaggggtgcagcgaggggtgcagcgtccggc 254 ||||||||||||||||||||||||| | |||||||||||||| ||| | |||| | Sbjct: 8 tgagctgcaacgggtgccgcgtgctgcgcaaggggtgcagcgacaactgcgccatccgcc 67 Query: 255 agtgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtcttcctcgcca 314 |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 68 cctgcctgcagtggattcgcagccccgatgcgcaggccaacgccaccgtcttcctcgcca 127 Query: 315 agttctacggccgcgcgggactcatgaacctcatcaacgcaggcccacacgacctcaggc 374 |||||||||||||||| || ||||| |||||||||| ||| ||||| | || || | | Sbjct: 128 agttctacggccgcgccggcctcatcaacctcatcaccgccggccccgagcacgtccgtc 187 Query: 375 ctgctatcttccggtcgctcatgtacgaggcttgcgggcggatcgtgaaccccatctacg 434 |||| || ||||||||||| |||||||||||||||||||||| ||||||| | |||| Sbjct: 188 ctgccatattccggtcgctgctgtacgaggcttgcgggcggatgctgaacccggtgtacg 247 Query: 435 gctccgtcggtctgctctggtctggcaactggcagatgtgccaggccgccgtcgaggccg 494 | |||||||| || |||||||| || ||||||||| | |||||| ||||||||||| ||| Sbjct: 248 gatccgtcggcctcctctggtcggggaactggcagctttgccagtccgccgtcgagtccg 307 Query: 495 t 495 | Sbjct: 308 t 308 >ref|NM_001049704.1| Oryza sativa (japonica cultivar-group) Os01g0511000 (Os01g0511000) mRNA, complete cds Length = 1415 Score = 168 bits (85), Expect = 4e-38 Identities = 133/149 (89%) Strand = Plus / Plus Query: 182 tcgaggatgaggctgagctgcaacgggtgccgcgtgctaaggaaggggtgcagcgagggg 241 |||| |||| || |||| |||||||| ||||| ||||| | ||||| |||||||| ||| Sbjct: 163 tcgaagatgcggatgagttgcaacggttgccgggtgctgcgcaagggatgcagcgaaggg 222 Query: 242 tgcagcgtccggcagtgcctgcagtggatcaagagccccgaggcgcaggccaacgccacc 301 |||| | |||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 223 tgcaccatccgtccgtgcctgcagtggatcaagacccccgaggcgcaggccaacgccacc 282 Query: 302 gtcttcctcgccaagttctacggccgcgc 330 ||||||||||||||||||||||||||||| Sbjct: 283 gtcttcctcgccaagttctacggccgcgc 311 Score = 131 bits (66), Expect = 9e-27 Identities = 111/126 (88%) Strand = Plus / Plus Query: 381 tcttccggtcgctcatgtacgaggcttgcgggcggatcgtgaaccccatctacggctccg 440 ||||||| |||||| | |||||||| ||||| || ||||| ||||| ||||||||||||| Sbjct: 362 tcttccgctcgctcctctacgaggcctgcggccgcatcgtcaacccgatctacggctccg 421 Query: 441 tcggtctgctctggtctggcaactggcagatgtgccaggccgccgtcgaggccgtgctca 500 |||| ||||||||||| ||| | |||||| |||||||||||||||||||||||| |||| Sbjct: 422 tcggcctgctctggtcgggccagtggcaggcgtgccaggccgccgtcgaggccgtcctca 481 Query: 501 agggcg 506 |||||| Sbjct: 482 agggcg 487 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 168 bits (85), Expect = 4e-38 Identities = 133/149 (89%) Strand = Plus / Minus Query: 182 tcgaggatgaggctgagctgcaacgggtgccgcgtgctaaggaaggggtgcagcgagggg 241 |||| |||| || |||| |||||||| ||||| ||||| | ||||| |||||||| ||| Sbjct: 17973274 tcgaagatgcggatgagttgcaacggttgccgggtgctgcgcaagggatgcagcgaaggg 17973215 Query: 242 tgcagcgtccggcagtgcctgcagtggatcaagagccccgaggcgcaggccaacgccacc 301 |||| | |||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 17973214 tgcaccatccgtccgtgcctgcagtggatcaagacccccgaggcgcaggccaacgccacc 17973155 Query: 302 gtcttcctcgccaagttctacggccgcgc 330 ||||||||||||||||||||||||||||| Sbjct: 17973154 gtcttcctcgccaagttctacggccgcgc 17973126 Score = 147 bits (74), Expect = 1e-31 Identities = 143/166 (86%) Strand = Plus / Plus Query: 195 tgagctgcaacgggtgccgcgtgctaaggaaggggtgcagcgaggggtgcagcgtccggc 254 ||||||||||||||||||||||||| | |||||||||||||| ||| | |||| | Sbjct: 1656383 tgagctgcaacgggtgccgcgtgctgcgcaaggggtgcagcgacaactgcgccatccgcc 1656442 Query: 255 agtgcctgcagtggatcaagagccccgaggcgcaggccaacgccaccgtcttcctcgcca 314 |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 1656443 cctgcctgcagtggattcgcagccccgatgcgcaggccaacgccaccgtcttcctcgcca 1656502 Query: 315 agttctacggccgcgcgggactcatgaacctcatcaacgcaggccc 360 |||||||||||||||| || ||||| |||||||||| ||| ||||| Sbjct: 1656503 agttctacggccgcgccggcctcatcaacctcatcaccgccggccc 1656548 Score = 143 bits (72), Expect = 2e-30 Identities = 138/160 (86%) Strand = Plus / Minus Query: 381 tcttccggtcgctcatgtacgaggcttgcgggcggatcgtgaaccccatctacggctccg 440 ||||||| |||||| | |||||||| ||||| || ||||| ||||| ||||||||||||| Sbjct: 17973075 tcttccgctcgctcctctacgaggcctgcggccgcatcgtcaacccgatctacggctccg 17973016 Query: 441 tcggtctgctctggtctggcaactggcagatgtgccaggccgccgtcgaggccgtgctca 500 |||| ||||||||||| ||| | |||||| |||||||||||||||||||||||| |||| Sbjct: 17973015 tcggcctgctctggtcgggccagtggcaggcgtgccaggccgccgtcgaggccgtcctca 17972956 Query: 501 agggcgcgcccatcgtccagatctcctccgaggtcgccgc 540 |||||| ||| |||| ||| ||||||| |||| |||||| Sbjct: 17972955 agggcgaccccgtcgtgcaggtctcctctgaggccgccgc 17972916 Score = 97.6 bits (49), Expect = 1e-16 Identities = 97/113 (85%) Strand = Plus / Plus Query: 383 ttccggtcgctcatgtacgaggcttgcgggcggatcgtgaaccccatctacggctccgtc 442 ||||||||||| |||||||||||||||||||||| ||||||| | ||||| |||||| Sbjct: 1656660 ttccggtcgctgctgtacgaggcttgcgggcggatgctgaacccggtgtacggatccgtc 1656719 Query: 443 ggtctgctctggtctggcaactggcagatgtgccaggccgccgtcgaggccgt 495 || || |||||||| || ||||||||| | |||||| ||||||||||| |||| Sbjct: 1656720 ggcctcctctggtcggggaactggcagctttgccagtccgccgtcgagtccgt 1656772 >dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0054L14 Length = 150022 Score = 168 bits (85), Expect = 4e-38 Identities = 133/149 (89%) Strand = Plus / Minus Query: 182 tcgaggatgaggctgagctgcaacgggtgccgcgtgctaaggaaggggtgcagcgagggg 241 |||| |||| || |||| |||||||| ||||| ||||| | ||||| |||||||| ||| Sbjct: 515 tcgaagatgcggatgagttgcaacggttgccgggtgctgcgcaagggatgcagcgaaggg 456 Query: 242 tgcagcgtccggcagtgcctgcagtggatcaagagccccgaggcgcaggccaacgccacc 301 |||| | |||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 455 tgcaccatccgtccgtgcctgcagtggatcaagacccccgaggcgcaggccaacgccacc 396 Query: 302 gtcttcctcgccaagttctacggccgcgc 330 ||||||||||||||||||||||||||||| Sbjct: 395 gtcttcctcgccaagttctacggccgcgc 367 Score = 143 bits (72), Expect = 2e-30 Identities = 138/160 (86%) Strand = Plus / Minus Query: 381 tcttccggtcgctcatgtacgaggcttgcgggcggatcgtgaaccccatctacggctccg 440 ||||||| |||||| | |||||||| ||||| || ||||| ||||| ||||||||||||| Sbjct: 316 tcttccgctcgctcctctacgaggcctgcggccgcatcgtcaacccgatctacggctccg 257 Query: 441 tcggtctgctctggtctggcaactggcagatgtgccaggccgccgtcgaggccgtgctca 500 |||| ||||||||||| ||| | |||||| |||||||||||||||||||||||| |||| Sbjct: 256 tcggcctgctctggtcgggccagtggcaggcgtgccaggccgccgtcgaggccgtcctca 197 Query: 501 agggcgcgcccatcgtccagatctcctccgaggtcgccgc 540 |||||| ||| |||| ||| ||||||| |||| |||||| Sbjct: 196 agggcgaccccgtcgtgcaggtctcctctgaggccgccgc 157 >dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0520B06 Length = 142667 Score = 168 bits (85), Expect = 4e-38 Identities = 133/149 (89%) Strand = Plus / Minus Query: 182 tcgaggatgaggctgagctgcaacgggtgccgcgtgctaaggaaggggtgcagcgagggg 241 |||| |||| || |||| |||||||| ||||| ||||| | ||||| |||||||| ||| Sbjct: 93109 tcgaagatgcggatgagttgcaacggttgccgggtgctgcgcaagggatgcagcgaaggg 93050 Query: 242 tgcagcgtccggcagtgcctgcagtggatcaagagccccgaggcgcaggccaacgccacc 301 |||| | |||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 93049 tgcaccatccgtccgtgcctgcagtggatcaagacccccgaggcgcaggccaacgccacc 92990 Query: 302 gtcttcctcgccaagttctacggccgcgc 330 ||||||||||||||||||||||||||||| Sbjct: 92989 gtcttcctcgccaagttctacggccgcgc 92961 Score = 143 bits (72), Expect = 2e-30 Identities = 138/160 (86%) Strand = Plus / Minus Query: 381 tcttccggtcgctcatgtacgaggcttgcgggcggatcgtgaaccccatctacggctccg 440 ||||||| |||||| | |||||||| ||||| || ||||| ||||| ||||||||||||| Sbjct: 92910 tcttccgctcgctcctctacgaggcctgcggccgcatcgtcaacccgatctacggctccg 92851 Query: 441 tcggtctgctctggtctggcaactggcagatgtgccaggccgccgtcgaggccgtgctca 500 |||| ||||||||||| ||| | |||||| |||||||||||||||||||||||| |||| Sbjct: 92850 tcggcctgctctggtcgggccagtggcaggcgtgccaggccgccgtcgaggccgtcctca 92791 Query: 501 agggcgcgcccatcgtccagatctcctccgaggtcgccgc 540 |||||| ||| |||| ||| ||||||| |||| |||||| Sbjct: 92790 agggcgaccccgtcgtgcaggtctcctctgaggccgccgc 92751