BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem209n23 (1441 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001052030.1| Oryza sativa (japonica cultivar-group) Os01g... 565 e-157 dbj|AK073409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 565 e-157 emb|CT831992.1| Oryza sativa (indica cultivar-group) cDNA clone:... 549 e-152 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 202 3e-48 dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic D... 202 3e-48 >ref|NM_001052030.1| Oryza sativa (japonica cultivar-group) Os01g0965600 (Os01g0965600) mRNA, complete cds Length = 1376 Score = 565 bits (285), Expect = e-157 Identities = 570/665 (85%) Strand = Plus / Plus Query: 490 tcgagcaagaagcaagggtatcttcttgtagttctttggagaaaagtagcactccatctt 549 ||||||| |||||| ||| ||| || ||||||||| ||||||| |||||||||||||| Sbjct: 380 tcgagcagcaagcaaaggtttctcctagtagttcttctgagaaaattagcactccatctt 439 Query: 550 caggacccaggaggaggggaaggggttcttttctttttgatgagagtgttctatacagtg 609 |||| |||| |||||||||||||||||| ||||||| || |||||||||||||||||| Sbjct: 440 cagggcccaagaggaggggaaggggttcgtttctttacgacaagagtgttctatacagtg 499 Query: 610 accagtgtggtttggaaagagatttggatgacaaggggtctaatcctcggagtggatcaa 669 | ||||||||| | |||| ||| ||||||| | | ||||||| || ||||||||||| Sbjct: 500 atcagtgtggtctagaaaatgatatggatgaacaagagtctaatgatcagagtggatcaa 559 Query: 670 aggctcatgtgaatgagcaggaggacaaagctggtacagttgcaacacaatttgggacaa 729 ||| | |||| |||||||| | |||| | | ||| ||| | ||||| |||||||| Sbjct: 560 agggccgtgtggatgagcagaaacacaagagtaatgcagctgcgaaacaatatgggacaa 619 Query: 730 ggcatgtccttgttctttatgacttttcacctagcacaagcacaacagatttggaaagaa 789 ||||||||||||||||||||||||| ||||||||||| | || |||||||||||| | Sbjct: 620 ggcatgtccttgttctttatgacttcccacctagcacactcgcagcagatttggaaaaga 679 Query: 790 tttttgaaaagttcggagaccatggagttgccattcgctgggttaatgatactgttgcac 849 |||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 680 ttttcgacaagtttggggaccatggagttgccattcgctgggttaatgatactgttgcac 739 Query: 850 ttgcagtttttcaaactccatcagctgctaatgaggcacaagcttgcgtgcctccaagat 909 |||||||||||| |||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 740 ttgcagtttttcggactccatcagctgctaatgaggcacaagcttgtatacctccaagat 799 Query: 910 ataaagtgcggtcactaaaggaggaggatgatctcttggcaaaaatagatggtagagacc 969 ||||||||||| ||||||| ||||| || ||||||||| |||||| ||||| | ||||| Sbjct: 800 ataaagtgcggccactaaaagaggatgacgatctcttgacaaaaaatgatggcatagacc 859 Query: 970 tagaaccgcccatgccaaggccgaggacgtcagccagaacagcgcaaaggctaattgctc 1029 | ||||| || | |||||||||| ||| || || |||||||| |||||||| ||||||| Sbjct: 860 ttgaaccaccaactccaaggccgaagacatctgcaagaacagcacaaaggctgattgctc 919 Query: 1030 atgggatggggttaaggcagtttacaaactttgggtcagatgaactgaagaaacaagagg 1089 |||| |||||| ||||||||||||||||||| |||||||| || |||||||||||||||| Sbjct: 920 atggaatggggctaaggcagtttacaaacttcgggtcagacgagctgaagaaacaagagg 979 Query: 1090 aggcgagaaggaaccgaatcgctgctcgacaagctatgcgtgacgatgcgtggggttcag 1149 ||||||| |||| ||||||||||||||||||||| |||| ||||| || |||||||||| Sbjct: 980 aggcgaggaggagtcgaatcgctgctcgacaagctttgcgggacgacgcatggggttcag 1039 Query: 1150 attga 1154 ||||| Sbjct: 1040 attga 1044 >dbj|AK073409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042I24, full insert sequence Length = 1377 Score = 565 bits (285), Expect = e-157 Identities = 570/665 (85%) Strand = Plus / Plus Query: 490 tcgagcaagaagcaagggtatcttcttgtagttctttggagaaaagtagcactccatctt 549 ||||||| |||||| ||| ||| || ||||||||| ||||||| |||||||||||||| Sbjct: 381 tcgagcagcaagcaaaggtttctcctagtagttcttctgagaaaattagcactccatctt 440 Query: 550 caggacccaggaggaggggaaggggttcttttctttttgatgagagtgttctatacagtg 609 |||| |||| |||||||||||||||||| ||||||| || |||||||||||||||||| Sbjct: 441 cagggcccaagaggaggggaaggggttcgtttctttacgacaagagtgttctatacagtg 500 Query: 610 accagtgtggtttggaaagagatttggatgacaaggggtctaatcctcggagtggatcaa 669 | ||||||||| | |||| ||| ||||||| | | ||||||| || ||||||||||| Sbjct: 501 atcagtgtggtctagaaaatgatatggatgaacaagagtctaatgatcagagtggatcaa 560 Query: 670 aggctcatgtgaatgagcaggaggacaaagctggtacagttgcaacacaatttgggacaa 729 ||| | |||| |||||||| | |||| | | ||| ||| | ||||| |||||||| Sbjct: 561 agggccgtgtggatgagcagaaacacaagagtaatgcagctgcgaaacaatatgggacaa 620 Query: 730 ggcatgtccttgttctttatgacttttcacctagcacaagcacaacagatttggaaagaa 789 ||||||||||||||||||||||||| ||||||||||| | || |||||||||||| | Sbjct: 621 ggcatgtccttgttctttatgacttcccacctagcacactcgcagcagatttggaaaaga 680 Query: 790 tttttgaaaagttcggagaccatggagttgccattcgctgggttaatgatactgttgcac 849 |||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 ttttcgacaagtttggggaccatggagttgccattcgctgggttaatgatactgttgcac 740 Query: 850 ttgcagtttttcaaactccatcagctgctaatgaggcacaagcttgcgtgcctccaagat 909 |||||||||||| |||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 741 ttgcagtttttcggactccatcagctgctaatgaggcacaagcttgtatacctccaagat 800 Query: 910 ataaagtgcggtcactaaaggaggaggatgatctcttggcaaaaatagatggtagagacc 969 ||||||||||| ||||||| ||||| || ||||||||| |||||| ||||| | ||||| Sbjct: 801 ataaagtgcggccactaaaagaggatgacgatctcttgacaaaaaatgatggcatagacc 860 Query: 970 tagaaccgcccatgccaaggccgaggacgtcagccagaacagcgcaaaggctaattgctc 1029 | ||||| || | |||||||||| ||| || || |||||||| |||||||| ||||||| Sbjct: 861 ttgaaccaccaactccaaggccgaagacatctgcaagaacagcacaaaggctgattgctc 920 Query: 1030 atgggatggggttaaggcagtttacaaactttgggtcagatgaactgaagaaacaagagg 1089 |||| |||||| ||||||||||||||||||| |||||||| || |||||||||||||||| Sbjct: 921 atggaatggggctaaggcagtttacaaacttcgggtcagacgagctgaagaaacaagagg 980 Query: 1090 aggcgagaaggaaccgaatcgctgctcgacaagctatgcgtgacgatgcgtggggttcag 1149 ||||||| |||| ||||||||||||||||||||| |||| ||||| || |||||||||| Sbjct: 981 aggcgaggaggagtcgaatcgctgctcgacaagctttgcgggacgacgcatggggttcag 1040 Query: 1150 attga 1154 ||||| Sbjct: 1041 attga 1045 >emb|CT831992.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA129J09, full insert sequence Length = 1306 Score = 549 bits (277), Expect = e-152 Identities = 568/665 (85%) Strand = Plus / Plus Query: 490 tcgagcaagaagcaagggtatcttcttgtagttctttggagaaaagtagcactccatctt 549 ||||||| |||||| ||| ||| || ||||||||| ||||||| |||||||||||||| Sbjct: 381 tcgagcagcaagcaaaggtttctcctagtagttcttctgagaaaattagcactccatctt 440 Query: 550 caggacccaggaggaggggaaggggttcttttctttttgatgagagtgttctatacagtg 609 |||| |||| |||||||||||||||||| ||||||| || |||||||||||||||||| Sbjct: 441 cagggcccaagaggaggggaaggggttcgtttctttacgacaagagtgttctatacagtg 500 Query: 610 accagtgtggtttggaaagagatttggatgacaaggggtctaatcctcggagtggatcaa 669 | ||||||||| | |||| ||| ||||||| | | ||||||| || ||||||||||| Sbjct: 501 atcagtgtggtctagaaaatgatatggatgaacaagagtctaatgatcagagtggatcaa 560 Query: 670 aggctcatgtgaatgagcaggaggacaaagctggtacagttgcaacacaatttgggacaa 729 ||| | |||| |||||||| | |||| | | ||| ||| | ||||| |||||||| Sbjct: 561 agggccgtgtggatgagcagaaacacaagagtaatgcagctgcgaaacaatatgggacaa 620 Query: 730 ggcatgtccttgttctttatgacttttcacctagcacaagcacaacagatttggaaagaa 789 ||||||||||||||||||||||||| ||||||||||| | || |||||||||||| | Sbjct: 621 ggcatgtccttgttctttatgacttcccacctagcacactcgcagcagatttggaaaaga 680 Query: 790 tttttgaaaagttcggagaccatggagttgccattcgctgggttaatgatactgttgcac 849 |||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 ttttcgacaagtttggggaccatggagttgccattcgctgggttaatgatactgttgcac 740 Query: 850 ttgcagtttttcaaactccatcagctgctaatgaggcacaagcttgcgtgcctccaagat 909 |||||||||||| |||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 741 ttgcagtttttcggactccatcagctgctaatgaggcacaagcttgtatacctccaagat 800 Query: 910 ataaagtgcggtcactaaaggaggaggatgatctcttggcaaaaatagatggtagagacc 969 ||||||||||| ||||||| ||||| || ||||||||| |||||| ||||| | ||||| Sbjct: 801 ataaagtgcggccactaaaagaggatgacgatctcttgacaaaaaatgatggcatagacc 860 Query: 970 tagaaccgcccatgccaaggccgaggacgtcagccagaacagcgcaaaggctaattgctc 1029 | ||||| || | |||||||||| ||| || || |||||||| |||||||| ||||||| Sbjct: 861 ttgaaccaccaactccaaggccgaagacatctgcaagaacagcacaaaggctgattgctc 920 Query: 1030 atgggatggggttaaggcagtttacaaactttgggtcagatgaactgaagaaacaagagg 1089 |||| |||||| ||||||||||||||||||| |||||||| || |||||||||||||||| Sbjct: 921 atggaatggggctaaggcagtttacaaacttcgggtcagacgagctgaagaaacaagagg 980 Query: 1090 aggcgagaaggaaccgaatcgctgctcgacaagctatgcgtgacgatgcgtggggttcag 1149 ||||||| |||| ||||| ||||||||||||||| |||| || || || |||||||||| Sbjct: 981 aggcgaggaggagtcgaattgctgctcgacaagctttgcgggatgacgcatggggttcag 1040 Query: 1150 attga 1154 ||||| Sbjct: 1041 attga 1045 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 202 bits (102), Expect = 3e-48 Identities = 150/166 (90%) Strand = Plus / Minus Query: 716 acaatttgggacaaggcatgtccttgttctttatgacttttcacctagcacaagcacaac 775 ||||| ||||||||||||||||||||||||||||||||| ||||||||||| | || | Sbjct: 42569188 acaatatgggacaaggcatgtccttgttctttatgacttcccacctagcacactcgcagc 42569129 Query: 776 agatttggaaagaatttttgaaaagttcggagaccatggagttgccattcgctgggttaa 835 ||||||||||| ||||| || ||||| || ||||||||||||||||||||||||||||| Sbjct: 42569128 agatttggaaaagattttcgacaagtttggggaccatggagttgccattcgctgggttaa 42569069 Query: 836 tgatactgttgcacttgcagtttttcaaactccatcagctgctaat 881 |||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 42569068 tgatactgttgcacttgcagtttttcggactccatcagctggtaat 42569023 Score = 196 bits (99), Expect = 2e-46 Identities = 153/171 (89%) Strand = Plus / Minus Query: 984 ccaaggccgaggacgtcagccagaacagcgcaaaggctaattgctcatgggatggggtta 1043 |||||||||| ||| || || |||||||| |||||||| ||||||||||| |||||| || Sbjct: 42567734 ccaaggccgaagacatctgcaagaacagcacaaaggctgattgctcatggaatggggcta 42567675 Query: 1044 aggcagtttacaaactttgggtcagatgaactgaagaaacaagaggaggcgagaaggaac 1103 ||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||| Sbjct: 42567674 aggcagtttacaaacttcgggtcagacgagctgaagaaacaagaggaggcgaggaggagt 42567615 Query: 1104 cgaatcgctgctcgacaagctatgcgtgacgatgcgtggggttcagattga 1154 ||||||||||||||||||||| |||| ||||| || ||||||||||||||| Sbjct: 42567614 cgaatcgctgctcgacaagctttgcgggacgacgcatggggttcagattga 42567564 Score = 135 bits (68), Expect = 6e-28 Identities = 167/200 (83%) Strand = Plus / Minus Query: 490 tcgagcaagaagcaagggtatcttcttgtagttctttggagaaaagtagcactccatctt 549 ||||||| |||||| ||| ||| || ||||||||| ||||||| |||||||||||||| Sbjct: 42569502 tcgagcagcaagcaaaggtttctcctagtagttcttctgagaaaattagcactccatctt 42569443 Query: 550 caggacccaggaggaggggaaggggttcttttctttttgatgagagtgttctatacagtg 609 |||| |||| |||||||||||||||||| ||||||| || |||||||||||||||||| Sbjct: 42569442 cagggcccaagaggaggggaaggggttcgtttctttacgacaagagtgttctatacagtg 42569383 Query: 610 accagtgtggtttggaaagagatttggatgacaaggggtctaatcctcggagtggatcaa 669 | ||||||||| | |||| ||| ||||||| | | ||||||| || ||||||||||| Sbjct: 42569382 atcagtgtggtctagaaaatgatatggatgaacaagagtctaatgatcagagtggatcaa 42569323 Query: 670 aggctcatgtgaatgagcag 689 ||| | |||| |||||||| Sbjct: 42569322 agggccgtgtggatgagcag 42569303 Score = 93.7 bits (47), Expect = 2e-15 Identities = 71/79 (89%) Strand = Plus / Minus Query: 876 gctaatgaggcacaagcttgcgtgcctccaagatataaagtgcggtcactaaaggaggag 935 |||||||||||||||||||| | ||||||||||||||||||||| ||||||| ||||| Sbjct: 42567995 gctaatgaggcacaagcttgtatacctccaagatataaagtgcggccactaaaagaggat 42567936 Query: 936 gatgatctcttggcaaaaa 954 || ||||||||| |||||| Sbjct: 42567935 gacgatctcttgacaaaaa 42567917 >dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 202 bits (102), Expect = 3e-48 Identities = 150/166 (90%) Strand = Plus / Minus Query: 716 acaatttgggacaaggcatgtccttgttctttatgacttttcacctagcacaagcacaac 775 ||||| ||||||||||||||||||||||||||||||||| ||||||||||| | || | Sbjct: 90071 acaatatgggacaaggcatgtccttgttctttatgacttcccacctagcacactcgcagc 90012 Query: 776 agatttggaaagaatttttgaaaagttcggagaccatggagttgccattcgctgggttaa 835 ||||||||||| ||||| || ||||| || ||||||||||||||||||||||||||||| Sbjct: 90011 agatttggaaaagattttcgacaagtttggggaccatggagttgccattcgctgggttaa 89952 Query: 836 tgatactgttgcacttgcagtttttcaaactccatcagctgctaat 881 |||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 89951 tgatactgttgcacttgcagtttttcggactccatcagctggtaat 89906 Score = 196 bits (99), Expect = 2e-46 Identities = 153/171 (89%) Strand = Plus / Minus Query: 984 ccaaggccgaggacgtcagccagaacagcgcaaaggctaattgctcatgggatggggtta 1043 |||||||||| ||| || || |||||||| |||||||| ||||||||||| |||||| || Sbjct: 88617 ccaaggccgaagacatctgcaagaacagcacaaaggctgattgctcatggaatggggcta 88558 Query: 1044 aggcagtttacaaactttgggtcagatgaactgaagaaacaagaggaggcgagaaggaac 1103 ||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||| Sbjct: 88557 aggcagtttacaaacttcgggtcagacgagctgaagaaacaagaggaggcgaggaggagt 88498 Query: 1104 cgaatcgctgctcgacaagctatgcgtgacgatgcgtggggttcagattga 1154 ||||||||||||||||||||| |||| ||||| || ||||||||||||||| Sbjct: 88497 cgaatcgctgctcgacaagctttgcgggacgacgcatggggttcagattga 88447 Score = 135 bits (68), Expect = 6e-28 Identities = 167/200 (83%) Strand = Plus / Minus Query: 490 tcgagcaagaagcaagggtatcttcttgtagttctttggagaaaagtagcactccatctt 549 ||||||| |||||| ||| ||| || ||||||||| ||||||| |||||||||||||| Sbjct: 90385 tcgagcagcaagcaaaggtttctcctagtagttcttctgagaaaattagcactccatctt 90326 Query: 550 caggacccaggaggaggggaaggggttcttttctttttgatgagagtgttctatacagtg 609 |||| |||| |||||||||||||||||| ||||||| || |||||||||||||||||| Sbjct: 90325 cagggcccaagaggaggggaaggggttcgtttctttacgacaagagtgttctatacagtg 90266 Query: 610 accagtgtggtttggaaagagatttggatgacaaggggtctaatcctcggagtggatcaa 669 | ||||||||| | |||| ||| ||||||| | | ||||||| || ||||||||||| Sbjct: 90265 atcagtgtggtctagaaaatgatatggatgaacaagagtctaatgatcagagtggatcaa 90206 Query: 670 aggctcatgtgaatgagcag 689 ||| | |||| |||||||| Sbjct: 90205 agggccgtgtggatgagcag 90186 Score = 93.7 bits (47), Expect = 2e-15 Identities = 71/79 (89%) Strand = Plus / Minus Query: 876 gctaatgaggcacaagcttgcgtgcctccaagatataaagtgcggtcactaaaggaggag 935 |||||||||||||||||||| | ||||||||||||||||||||| ||||||| ||||| Sbjct: 88878 gctaatgaggcacaagcttgtatacctccaagatataaagtgcggccactaaaagaggat 88819 Query: 936 gatgatctcttggcaaaaa 954 || ||||||||| |||||| Sbjct: 88818 gacgatctcttgacaaaaa 88800