BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem209i11 (1305 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001055245.1| Oryza sativa (japonica cultivar-group) Os03g... 1033 0.0 dbj|AK100123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 1033 0.0 dbj|AK069551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 424 e-115 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 178 4e-41 gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome... 178 4e-41 >ref|NM_001055245.1| Oryza sativa (japonica cultivar-group) Os03g0109700 (Os03g0109700) mRNA, complete cds Length = 1262 Score = 1033 bits (521), Expect = 0.0 Identities = 820/919 (89%), Gaps = 3/919 (0%) Strand = Plus / Plus Query: 240 cttacgatcatgcctcgtttcttaaggaaatcgccgcaaccgatcccccagagcatctta 299 |||||||||| || |||||| ||||||| |||||||||||||||| || |||||||||| Sbjct: 206 cttacgatcacgcgtcgtttattaaggaggtcgccgcaaccgatccaccggagcatctta 265 Query: 300 aatctctgttgaatgtgcttcaggcacgaggcgaaaagttagtttctcctggagctaaaa 359 || || |||||||||| ||||||||||| |||||| |||||||||| || || |||| Sbjct: 266 gctcgttgctgaatgtgctccaggcacgaggtgaaaagctagtttctccaggggcgaaaa 325 Query: 360 gagggctgattccacttgtagttcccttgtcagaaagcccggcaggtaatttaacatccc 419 |||| |||||||||||||| |||||||| ||||||| || ||||||||||||||||| | Sbjct: 326 gaggcctgattccacttgttgttcccttagcagaaagtccagcaggtaatttaacatcac 385 Query: 420 tactgagatggccaactgctccaagtgggatggaaatgcctgtagtggaagtccggaatc 479 |||||||||||||||||||||| || ||||||||||||||||| |||||||| || |||| Sbjct: 386 tactgagatggccaactgctcctagcgggatggaaatgcctgtggtggaagttcgtaatc 445 Query: 480 atgggctatggctcttggctaagaacgtgaaccaatatattcacagaatactcgtcgagg 539 | || |||||||| ||||||||||| ||||||||||||||||||||| | ||||| |||| Sbjct: 446 acggcctatggcttttggctaagaatgtgaaccaatatattcacagagtgctcgttgagg 505 Query: 540 ctgatatcagtgctgattgtggtggtgatttatggtctgctgcaggggaagctggtaaaa 599 ||||||||| || | | | || ||||||||||||||||| ||||| ||||||||| Sbjct: 506 ctgatatcaatggttac---gctgatgatttatggtctgctgtgggggacactggtaaaa 562 Query: 600 acctttacacaaaaggtgatttcaaagagtcacagatggaagatcttgatgtctatttgt 659 | ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 563 aactttacacaaaaggtgatttcaaagagtcacagatggcagatcttgatgcctatttgt 622 Query: 660 tgaagaaggttggactctttccggatgttatagagaggaaaacatcacgccatctagaaa 719 ||||||||||||| |||||||| |||||||||||||| ||||||||||||||| | |||| Sbjct: 623 tgaagaaggttggcctctttccagatgttatagagagaaaaacatcacgccatttcgaaa 682 Query: 720 aacgagatcatgtctcggctcttattactggagaattctacactagagatcattttcccg 779 || ||||| |||| || ||||| ||||||||||||||||||||||||||||| ||||| | Sbjct: 683 aaggagattatgtgtcagctctaattactggagaattctacactagagatcaatttcctg 742 Query: 780 gatttggaagaccctttgtgttcaacgcagagattttaagaggagttggacgtacatctg 839 |||||||||| ||||||||||||||||||||||| |||| | ||||||| |||||| | | Sbjct: 743 gatttggaaggccctttgtgttcaacgcagagatattaaaaagagttgggcgtacaaccg 802 Query: 840 aagccaaagattcagctcgggtggctttgaagtcaccatggtggacactaggctgtagat 899 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| || | Sbjct: 803 aagccaaagattcagctcgagtggctctgaagtcaccatggtggacactgggctgcagtt 862 Query: 900 acgaagaggctgctgaattagctgggtgggaggatgaacaaattgagtttataagagaga 959 | ||||||||||||||||||||||||||||||||||| || |||||||||||| |||||| Sbjct: 863 atgaagaggctgctgaattagctgggtgggaggatgagcagattgagtttatacgagaga 922 Query: 960 aggtaactgaggagggcaagcgcgaggatctgaagaaagggaaagctccagaacaggtgg 1019 |||| | ||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 923 aggttagtgaggagggcaagcgtgaggatctgaagaaaggaaaagctccagaacaggtgg 982 Query: 1020 ttcttgatgaggcggcatttctaatggatttagcttccgtggatggtaattgggatgacg 1079 ||||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || | Sbjct: 983 ttcttgacgaggcagcatttctaatggatttggcatcggtggatggtaattgggacgatg 1042 Query: 1080 ttgtggatcgaattgctggatgttacagagaatctgggcttcatgacattgcaaagttca 1139 |||| ||||||||||||||||||||||||||| |||| ||| |||| ||||| ||||||| Sbjct: 1043 ttgttgatcgaattgctggatgttacagagaagctggacttgatgatattgcgaagttca 1102 Query: 1140 ttgcttacagggaatagtt 1158 |||||||| |||||||||| Sbjct: 1103 ttgcttaccgggaatagtt 1121 >dbj|AK100123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007O11, full insert sequence Length = 1263 Score = 1033 bits (521), Expect = 0.0 Identities = 820/919 (89%), Gaps = 3/919 (0%) Strand = Plus / Plus Query: 240 cttacgatcatgcctcgtttcttaaggaaatcgccgcaaccgatcccccagagcatctta 299 |||||||||| || |||||| ||||||| |||||||||||||||| || |||||||||| Sbjct: 207 cttacgatcacgcgtcgtttattaaggaggtcgccgcaaccgatccaccggagcatctta 266 Query: 300 aatctctgttgaatgtgcttcaggcacgaggcgaaaagttagtttctcctggagctaaaa 359 || || |||||||||| ||||||||||| |||||| |||||||||| || || |||| Sbjct: 267 gctcgttgctgaatgtgctccaggcacgaggtgaaaagctagtttctccaggggcgaaaa 326 Query: 360 gagggctgattccacttgtagttcccttgtcagaaagcccggcaggtaatttaacatccc 419 |||| |||||||||||||| |||||||| ||||||| || ||||||||||||||||| | Sbjct: 327 gaggcctgattccacttgttgttcccttagcagaaagtccagcaggtaatttaacatcac 386 Query: 420 tactgagatggccaactgctccaagtgggatggaaatgcctgtagtggaagtccggaatc 479 |||||||||||||||||||||| || ||||||||||||||||| |||||||| || |||| Sbjct: 387 tactgagatggccaactgctcctagcgggatggaaatgcctgtggtggaagttcgtaatc 446 Query: 480 atgggctatggctcttggctaagaacgtgaaccaatatattcacagaatactcgtcgagg 539 | || |||||||| ||||||||||| ||||||||||||||||||||| | ||||| |||| Sbjct: 447 acggcctatggcttttggctaagaatgtgaaccaatatattcacagagtgctcgttgagg 506 Query: 540 ctgatatcagtgctgattgtggtggtgatttatggtctgctgcaggggaagctggtaaaa 599 ||||||||| || | | | || ||||||||||||||||| ||||| ||||||||| Sbjct: 507 ctgatatcaatggttac---gctgatgatttatggtctgctgtgggggacactggtaaaa 563 Query: 600 acctttacacaaaaggtgatttcaaagagtcacagatggaagatcttgatgtctatttgt 659 | ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 564 aactttacacaaaaggtgatttcaaagagtcacagatggcagatcttgatgcctatttgt 623 Query: 660 tgaagaaggttggactctttccggatgttatagagaggaaaacatcacgccatctagaaa 719 ||||||||||||| |||||||| |||||||||||||| ||||||||||||||| | |||| Sbjct: 624 tgaagaaggttggcctctttccagatgttatagagagaaaaacatcacgccatttcgaaa 683 Query: 720 aacgagatcatgtctcggctcttattactggagaattctacactagagatcattttcccg 779 || ||||| |||| || ||||| ||||||||||||||||||||||||||||| ||||| | Sbjct: 684 aaggagattatgtgtcagctctaattactggagaattctacactagagatcaatttcctg 743 Query: 780 gatttggaagaccctttgtgttcaacgcagagattttaagaggagttggacgtacatctg 839 |||||||||| ||||||||||||||||||||||| |||| | ||||||| |||||| | | Sbjct: 744 gatttggaaggccctttgtgttcaacgcagagatattaaaaagagttgggcgtacaaccg 803 Query: 840 aagccaaagattcagctcgggtggctttgaagtcaccatggtggacactaggctgtagat 899 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| || | Sbjct: 804 aagccaaagattcagctcgagtggctctgaagtcaccatggtggacactgggctgcagtt 863 Query: 900 acgaagaggctgctgaattagctgggtgggaggatgaacaaattgagtttataagagaga 959 | ||||||||||||||||||||||||||||||||||| || |||||||||||| |||||| Sbjct: 864 atgaagaggctgctgaattagctgggtgggaggatgagcagattgagtttatacgagaga 923 Query: 960 aggtaactgaggagggcaagcgcgaggatctgaagaaagggaaagctccagaacaggtgg 1019 |||| | ||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 924 aggttagtgaggagggcaagcgtgaggatctgaagaaaggaaaagctccagaacaggtgg 983 Query: 1020 ttcttgatgaggcggcatttctaatggatttagcttccgtggatggtaattgggatgacg 1079 ||||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || | Sbjct: 984 ttcttgacgaggcagcatttctaatggatttggcatcggtggatggtaattgggacgatg 1043 Query: 1080 ttgtggatcgaattgctggatgttacagagaatctgggcttcatgacattgcaaagttca 1139 |||| ||||||||||||||||||||||||||| |||| ||| |||| ||||| ||||||| Sbjct: 1044 ttgttgatcgaattgctggatgttacagagaagctggacttgatgatattgcgaagttca 1103 Query: 1140 ttgcttacagggaatagtt 1158 |||||||| |||||||||| Sbjct: 1104 ttgcttaccgggaatagtt 1122 >dbj|AK069551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025O15, full insert sequence Length = 1164 Score = 424 bits (214), Expect = e-115 Identities = 378/432 (87%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 240 cttacgatcatgcctcgtttcttaaggaaatcgccgcaaccgatcccccagagcatctta 299 |||||||||| || |||||| ||||||| |||||||||||||||| || |||||||||| Sbjct: 211 cttacgatcacgcgtcgtttattaaggaggtcgccgcaaccgatccaccggagcatctta 270 Query: 300 aatctctgttgaatgtgcttcaggcacgaggcgaaaagttagtttctcctggagctaaaa 359 || || |||||||||| ||||||||||| |||||| |||||||||| || || |||| Sbjct: 271 gctcgttgctgaatgtgctccaggcacgaggtgaaaagctagtttctccaggggcgaaaa 330 Query: 360 gagggctgattccacttgtagttcccttgtcagaaagcccggcaggtaatttaacatccc 419 |||| |||||||||||||| ||||| || ||||||| || ||||||||||||||||| | Sbjct: 331 gaggcctgattccacttgttgttccgttagcagaaagtccagcaggtaatttaacatcac 390 Query: 420 tactgagatggccaactgctccaagtgggatggaaatgcctgtagtggaagtccggaatc 479 |||||||||||||||||||||| || ||||||||||||||||| |||||||| || |||| Sbjct: 391 tactgagatggccaactgctcctagcgggatggaaatgcctgtggtggaagttcgtaatc 450 Query: 480 atgggctatggctcttggctaagaacgtgaaccaatatattcacagaatactcgtcgagg 539 | || |||||||| ||||||||||| ||||||||||||||||||||| | ||||| |||| Sbjct: 451 acggcctatggcttttggctaagaatgtgaaccaatatattcacagagtgctcgttgagg 510 Query: 540 ctgatatcagtgctgattgtggtggtgatttatggtctgctgcaggggaagctggtaaaa 599 ||||||||| || || | || ||||||||||||||||| ||||| ||||||||| Sbjct: 511 ctgatatca---atggttacgctgatgatttatggtctgctgtgggggacactggtaaaa 567 Query: 600 acctttacacaaaaggtgatttcaaagagtcacagatggaagatcttgatgtctatttgt 659 | ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 568 aactttacacaaaaggtgatttcaaagagtcacagatggcagatcttgatgcctatttgt 627 Query: 660 tgaagaaggttg 671 |||||||||||| Sbjct: 628 tgaagaaggttg 639 Score = 123 bits (62), Expect = 2e-24 Identities = 77/82 (93%) Strand = Plus / Plus Query: 737 gctcttattactggagaattctacactagagatcattttcccggatttggaagacccttt 796 ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| Sbjct: 872 gctctaattactggagaattctacactagagatcaatttcctggatttggaaggcccttt 931 Query: 797 gtgttcaacgcagagattttaa 818 ||||||||||||||||| |||| Sbjct: 932 gtgttcaacgcagagatattaa 953 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 178 bits (90), Expect = 4e-41 Identities = 132/146 (90%) Strand = Plus / Minus Query: 1013 caggtggttcttgatgaggcggcatttctaatggatttagcttccgtggatggtaattgg 1072 |||||||||||||| ||||| ||||||||||||||||| || || ||||||||||||||| Sbjct: 546618 caggtggttcttgacgaggcagcatttctaatggatttggcatcggtggatggtaattgg 546559 Query: 1073 gatgacgttgtggatcgaattgctggatgttacagagaatctgggcttcatgacattgca 1132 || || ||||| ||||||||||||||||||||||||||| |||| ||| |||| ||||| Sbjct: 546558 gacgatgttgttgatcgaattgctggatgttacagagaagctggacttgatgatattgcg 546499 Query: 1133 aagttcattgcttacagggaatagtt 1158 ||||||||||||||| |||||||||| Sbjct: 546498 aagttcattgcttaccgggaatagtt 546473 Score = 174 bits (88), Expect = 6e-40 Identities = 147/166 (88%), Gaps = 3/166 (1%) Strand = Plus / Minus Query: 506 gtgaaccaatatattcacagaatactcgtcgaggctgatatcagtgctgattgtggtggt 565 ||||||||||||||||||||| | ||||| ||||||||||||| || | | | || | Sbjct: 548062 gtgaaccaatatattcacagagtgctcgttgaggctgatatcaatggttac---gctgat 548006 Query: 566 gatttatggtctgctgcaggggaagctggtaaaaacctttacacaaaaggtgatttcaaa 625 |||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||| Sbjct: 548005 gatttatggtctgctgtgggggacactggtaaaaaactttacacaaaaggtgatttcaaa 547946 Query: 626 gagtcacagatggaagatcttgatgtctatttgttgaagaaggttg 671 ||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 547945 gagtcacagatggcagatcttgatgcctatttgttgaagaaggttg 547900 Score = 172 bits (87), Expect = 2e-39 Identities = 108/115 (93%) Strand = Plus / Minus Query: 905 gaggctgctgaattagctgggtgggaggatgaacaaattgagtttataagagagaaggta 964 |||||||||||||||||||||||||||||||| || |||||||||||| |||||||||| Sbjct: 546819 gaggctgctgaattagctgggtgggaggatgagcagattgagtttatacgagagaaggtt 546760 Query: 965 actgaggagggcaagcgcgaggatctgaagaaagggaaagctccagaacaggtgg 1019 | ||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 546759 agtgaggagggcaagcgtgaggatctgaagaaaggaaaagctccagaacaggtgg 546705 Score = 123 bits (62), Expect = 2e-24 Identities = 77/82 (93%) Strand = Plus / Minus Query: 737 gctcttattactggagaattctacactagagatcattttcccggatttggaagacccttt 796 ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| Sbjct: 547667 gctctaattactggagaattctacactagagatcaatttcctggatttggaaggcccttt 547608 Query: 797 gtgttcaacgcagagattttaa 818 ||||||||||||||||| |||| Sbjct: 547607 gtgttcaacgcagagatattaa 547586 Score = 97.6 bits (49), Expect = 1e-16 Identities = 67/73 (91%) Strand = Plus / Minus Query: 822 gagttggacgtacatctgaagccaaagattcagctcgggtggctttgaagtcaccatggt 881 ||||||| |||||| | |||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 547017 gagttgggcgtacaaccgaagccaaagattcagctcgagtggctctgaagtcaccatggt 546958 Query: 882 ggacactaggctg 894 ||||||| ||||| Sbjct: 546957 ggacactgggctg 546945 >gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0043C10, complete sequence Length = 108688 Score = 178 bits (90), Expect = 4e-41 Identities = 132/146 (90%) Strand = Plus / Plus Query: 1013 caggtggttcttgatgaggcggcatttctaatggatttagcttccgtggatggtaattgg 1072 |||||||||||||| ||||| ||||||||||||||||| || || ||||||||||||||| Sbjct: 69298 caggtggttcttgacgaggcagcatttctaatggatttggcatcggtggatggtaattgg 69357 Query: 1073 gatgacgttgtggatcgaattgctggatgttacagagaatctgggcttcatgacattgca 1132 || || ||||| ||||||||||||||||||||||||||| |||| ||| |||| ||||| Sbjct: 69358 gacgatgttgttgatcgaattgctggatgttacagagaagctggacttgatgatattgcg 69417 Query: 1133 aagttcattgcttacagggaatagtt 1158 ||||||||||||||| |||||||||| Sbjct: 69418 aagttcattgcttaccgggaatagtt 69443 Score = 174 bits (88), Expect = 6e-40 Identities = 147/166 (88%), Gaps = 3/166 (1%) Strand = Plus / Plus Query: 506 gtgaaccaatatattcacagaatactcgtcgaggctgatatcagtgctgattgtggtggt 565 ||||||||||||||||||||| | ||||| ||||||||||||| || | | | || | Sbjct: 67854 gtgaaccaatatattcacagagtgctcgttgaggctgatatcaatggttac---gctgat 67910 Query: 566 gatttatggtctgctgcaggggaagctggtaaaaacctttacacaaaaggtgatttcaaa 625 |||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||| Sbjct: 67911 gatttatggtctgctgtgggggacactggtaaaaaactttacacaaaaggtgatttcaaa 67970 Query: 626 gagtcacagatggaagatcttgatgtctatttgttgaagaaggttg 671 ||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 67971 gagtcacagatggcagatcttgatgcctatttgttgaagaaggttg 68016 Score = 172 bits (87), Expect = 2e-39 Identities = 108/115 (93%) Strand = Plus / Plus Query: 905 gaggctgctgaattagctgggtgggaggatgaacaaattgagtttataagagagaaggta 964 |||||||||||||||||||||||||||||||| || |||||||||||| |||||||||| Sbjct: 69097 gaggctgctgaattagctgggtgggaggatgagcagattgagtttatacgagagaaggtt 69156 Query: 965 actgaggagggcaagcgcgaggatctgaagaaagggaaagctccagaacaggtgg 1019 | ||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 69157 agtgaggagggcaagcgtgaggatctgaagaaaggaaaagctccagaacaggtgg 69211 Score = 123 bits (62), Expect = 2e-24 Identities = 77/82 (93%) Strand = Plus / Plus Query: 737 gctcttattactggagaattctacactagagatcattttcccggatttggaagacccttt 796 ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| Sbjct: 68249 gctctaattactggagaattctacactagagatcaatttcctggatttggaaggcccttt 68308 Query: 797 gtgttcaacgcagagattttaa 818 ||||||||||||||||| |||| Sbjct: 68309 gtgttcaacgcagagatattaa 68330 Score = 97.6 bits (49), Expect = 1e-16 Identities = 67/73 (91%) Strand = Plus / Plus Query: 822 gagttggacgtacatctgaagccaaagattcagctcgggtggctttgaagtcaccatggt 881 ||||||| |||||| | |||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 68899 gagttgggcgtacaaccgaagccaaagattcagctcgagtggctctgaagtcaccatggt 68958 Query: 882 ggacactaggctg 894 ||||||| ||||| Sbjct: 68959 ggacactgggctg 68971