BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem208o01 (1573 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 319 2e-83 dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic D... 319 2e-83 gb|AY111625.1| Zea mays CL55281_1 mRNA sequence 250 1e-62 ref|NM_001050282.1| Oryza sativa (japonica cultivar-group) Os01g... 236 2e-58 dbj|AK058593.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 2e-58 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 319 bits (161), Expect = 2e-83 Identities = 200/213 (93%) Strand = Plus / Plus Query: 336 tccagttttctatgaggaatccaaaggtaatggtgctatcagtggcattgcccctcccgc 395 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 26521805 tccagttttctatgaggaatccaaaggtaatggtgctatcagtagcattgcccctcccac 26521864 Query: 396 ctcctgaggcaattctatatgatgggcttccacttggcactattgaggctataaaggcag 455 |||||||||| || ||||||||||| ||||||||||| |||| ||||| |||||||||| Sbjct: 26521865 ctcctgaggccatgctatatgatggacttccacttggtgctatcgaggcaataaaggcag 26521924 Query: 456 cttatgggccagttgttcaaattcttgatcctccaaaggatggctttgatctcacaatga 515 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26521925 cttatggaccagtcgttcaaattcttgatcctccaaaggatggctttgatctcacaatga 26521984 Query: 516 agataaacctaacaaagcttccgccagatgaag 548 |||||||| | |||||||||||||||||||||| Sbjct: 26521985 agataaacttgacaaagcttccgccagatgaag 26522017 Score = 248 bits (125), Expect = 6e-62 Identities = 161/173 (93%) Strand = Plus / Plus Query: 547 agagcaaaggaatgctatcttgacacaaattgcatctgtgagagaggttgtgctgggtgc 606 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 26522552 agagcaaaggaatgctgtcttgactcaaattgcatctgtgagagaggtggtgctgggtgc 26522611 Query: 607 accactgaagcttctgctgaagcatctagcttcaaagacaatggctcctaatgttggcaa 666 ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 26522612 accactgaaacttctgctgaagcatctagcttcaaagacggtggctcctaatgttgacaa 26522671 Query: 667 gctggttgcccttgttcaccgtcctaatgaatcattcttccttgctccccagg 719 ||| ||||| ||||||||||||||||||||||| || ||| |||||||||||| Sbjct: 26522672 gcttgttgctcttgttcaccgtcctaatgaatcctttttcgttgctccccagg 26522724 Score = 137 bits (69), Expect = 2e-28 Identities = 84/89 (94%) Strand = Plus / Plus Query: 929 gttgttttccctcggcatgttgagggtaaaaagatagacaaaacagtttggagtttgtta 988 ||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 26523486 gttgttttcccgcggcatgttgagggtaaaaaattggacaaaacagtttggagtttgttg 26523545 Query: 989 acttttcatgcttatgtaagctaccatgt 1017 ||||||||||||||||||||||||||||| Sbjct: 26523546 acttttcatgcttatgtaagctaccatgt 26523574 Score = 133 bits (67), Expect = 2e-27 Identities = 118/135 (87%) Strand = Plus / Plus Query: 795 aggaatttgtggaagcaaggcggactgctgcgcttaataacgctccttcctgtatgtggt 854 |||||||||||||||||||||||||| || ||||| ||||| |||||||| |||||| Sbjct: 26523269 aggaatttgtggaagcaaggcggactagcgctcttaacaacgccccttcctgcttgtggt 26523328 Query: 855 ctccaacacctcctcttgaattaaaaggcgcgcctgctgatgcactaaatgcaaataccg 914 ||||| ||| |||||||| |||||||| | ||| |||||||||||||||||||| ||| Sbjct: 26523329 ctccagtaccacctcttgagttaaaaggagtaccttctgatgcactaaatgcaaatgccg 26523388 Query: 915 gttttgttacttttg 929 ||||||||||||||| Sbjct: 26523389 gttttgttacttttg 26523403 Score = 131 bits (66), Expect = 9e-27 Identities = 69/70 (98%) Strand = Plus / Plus Query: 271 cagtggcgacaagggcgtggacatcgattgccacacggtggaatacgacgatgtgcggta 330 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 26521110 cagtggcgacaagggcgtggacatcgattgccacacggtggaattcgacgatgtgcggta 26521169 Query: 331 tcatatccag 340 |||||||||| Sbjct: 26521170 tcatatccag 26521179 Score = 127 bits (64), Expect = 1e-25 Identities = 143/167 (85%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 1076 caggctttggaccgtgcaaaatccgatgcagagaagttgaagaaattggtgcacggggga 1135 ||||||||||| ||||||||||| |||||||||||||||||||| |||||| | || ||| Sbjct: 26524723 caggctttggatcgtgcaaaatctgatgcagagaagttgaagaagttggtgaatggtgga 26524782 Query: 1136 tcttttaaaagactggtttgtgcatatacatagcatttgtgcataga-ccatcacttctt 1194 ||||| ||||| |||||||||||| |||| | | ||| |||| || | ||||| ||||| Sbjct: 26524783 tctttcaaaaggctggtttgtgcaaataccttgaattcgtgcttaaacccatcttttctt 26524842 Query: 1195 tcactgattcag--gctcctcgcagagcttgaagaatgaaggcaact 1239 ||||||||| || |||||||||||||||||| ||||| ||||||| Sbjct: 26524843 tcactgattaagactctcctcgcagagcttgaataatgacggcaact 26524889 Score = 95.6 bits (48), Expect = 5e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 1020 agtgttctgaaggattcatgcacaccaggatgaggcgaagagttgagtcgctgatccagg 1079 |||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| Sbjct: 26524186 agtgttctgaaggattcatgcacaccaggatgagacgtagagttgagacgctgatccagg 26524245 Score = 85.7 bits (43), Expect = 5e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 211 gatgatattactccagtccccgtcaaggttcctgctccagatcctgcaagatcgcgtcct 270 ||||||| | |||||||| ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 26520967 gatgatacttctccagtcgccgtccaggttcctgctccagatcctgcaggatcgcgtcct 26521026 Query: 271 cag 273 ||| Sbjct: 26521027 cag 26521029 Score = 85.7 bits (43), Expect = 5e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 716 caggcagacaaagttatggttgtgtacccaatgaggttccaggattccattgatattgtg 775 |||||||||||||||| || || ||||| |||||||||||||||||||||||||| || Sbjct: 26522901 caggcagacaaagttacagtagtataccctatgaggttccaggattccattgatatagtt 26522960 Query: 776 ttagcaacttc 786 ||||||||||| Sbjct: 26522961 ttagcaacttc 26522971 >dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0006H05 Length = 154821 Score = 319 bits (161), Expect = 2e-83 Identities = 200/213 (93%) Strand = Plus / Plus Query: 336 tccagttttctatgaggaatccaaaggtaatggtgctatcagtggcattgcccctcccgc 395 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 130424 tccagttttctatgaggaatccaaaggtaatggtgctatcagtagcattgcccctcccac 130483 Query: 396 ctcctgaggcaattctatatgatgggcttccacttggcactattgaggctataaaggcag 455 |||||||||| || ||||||||||| ||||||||||| |||| ||||| |||||||||| Sbjct: 130484 ctcctgaggccatgctatatgatggacttccacttggtgctatcgaggcaataaaggcag 130543 Query: 456 cttatgggccagttgttcaaattcttgatcctccaaaggatggctttgatctcacaatga 515 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130544 cttatggaccagtcgttcaaattcttgatcctccaaaggatggctttgatctcacaatga 130603 Query: 516 agataaacctaacaaagcttccgccagatgaag 548 |||||||| | |||||||||||||||||||||| Sbjct: 130604 agataaacttgacaaagcttccgccagatgaag 130636 Score = 248 bits (125), Expect = 6e-62 Identities = 161/173 (93%) Strand = Plus / Plus Query: 547 agagcaaaggaatgctatcttgacacaaattgcatctgtgagagaggttgtgctgggtgc 606 |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 131171 agagcaaaggaatgctgtcttgactcaaattgcatctgtgagagaggtggtgctgggtgc 131230 Query: 607 accactgaagcttctgctgaagcatctagcttcaaagacaatggctcctaatgttggcaa 666 ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 131231 accactgaaacttctgctgaagcatctagcttcaaagacggtggctcctaatgttgacaa 131290 Query: 667 gctggttgcccttgttcaccgtcctaatgaatcattcttccttgctccccagg 719 ||| ||||| ||||||||||||||||||||||| || ||| |||||||||||| Sbjct: 131291 gcttgttgctcttgttcaccgtcctaatgaatcctttttcgttgctccccagg 131343 Score = 137 bits (69), Expect = 2e-28 Identities = 84/89 (94%) Strand = Plus / Plus Query: 929 gttgttttccctcggcatgttgagggtaaaaagatagacaaaacagtttggagtttgtta 988 ||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 132105 gttgttttcccgcggcatgttgagggtaaaaaattggacaaaacagtttggagtttgttg 132164 Query: 989 acttttcatgcttatgtaagctaccatgt 1017 ||||||||||||||||||||||||||||| Sbjct: 132165 acttttcatgcttatgtaagctaccatgt 132193 Score = 133 bits (67), Expect = 2e-27 Identities = 118/135 (87%) Strand = Plus / Plus Query: 795 aggaatttgtggaagcaaggcggactgctgcgcttaataacgctccttcctgtatgtggt 854 |||||||||||||||||||||||||| || ||||| ||||| |||||||| |||||| Sbjct: 131888 aggaatttgtggaagcaaggcggactagcgctcttaacaacgccccttcctgcttgtggt 131947 Query: 855 ctccaacacctcctcttgaattaaaaggcgcgcctgctgatgcactaaatgcaaataccg 914 ||||| ||| |||||||| |||||||| | ||| |||||||||||||||||||| ||| Sbjct: 131948 ctccagtaccacctcttgagttaaaaggagtaccttctgatgcactaaatgcaaatgccg 132007 Query: 915 gttttgttacttttg 929 ||||||||||||||| Sbjct: 132008 gttttgttacttttg 132022 Score = 131 bits (66), Expect = 9e-27 Identities = 69/70 (98%) Strand = Plus / Plus Query: 271 cagtggcgacaagggcgtggacatcgattgccacacggtggaatacgacgatgtgcggta 330 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129729 cagtggcgacaagggcgtggacatcgattgccacacggtggaattcgacgatgtgcggta 129788 Query: 331 tcatatccag 340 |||||||||| Sbjct: 129789 tcatatccag 129798 Score = 127 bits (64), Expect = 1e-25 Identities = 143/167 (85%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 1076 caggctttggaccgtgcaaaatccgatgcagagaagttgaagaaattggtgcacggggga 1135 ||||||||||| ||||||||||| |||||||||||||||||||| |||||| | || ||| Sbjct: 133342 caggctttggatcgtgcaaaatctgatgcagagaagttgaagaagttggtgaatggtgga 133401 Query: 1136 tcttttaaaagactggtttgtgcatatacatagcatttgtgcataga-ccatcacttctt 1194 ||||| ||||| |||||||||||| |||| | | ||| |||| || | ||||| ||||| Sbjct: 133402 tctttcaaaaggctggtttgtgcaaataccttgaattcgtgcttaaacccatcttttctt 133461 Query: 1195 tcactgattcag--gctcctcgcagagcttgaagaatgaaggcaact 1239 ||||||||| || |||||||||||||||||| ||||| ||||||| Sbjct: 133462 tcactgattaagactctcctcgcagagcttgaataatgacggcaact 133508 Score = 95.6 bits (48), Expect = 5e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 1020 agtgttctgaaggattcatgcacaccaggatgaggcgaagagttgagtcgctgatccagg 1079 |||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| Sbjct: 132805 agtgttctgaaggattcatgcacaccaggatgagacgtagagttgagacgctgatccagg 132864 Score = 85.7 bits (43), Expect = 5e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 211 gatgatattactccagtccccgtcaaggttcctgctccagatcctgcaagatcgcgtcct 270 ||||||| | |||||||| ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 129586 gatgatacttctccagtcgccgtccaggttcctgctccagatcctgcaggatcgcgtcct 129645 Query: 271 cag 273 ||| Sbjct: 129646 cag 129648 Score = 85.7 bits (43), Expect = 5e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 716 caggcagacaaagttatggttgtgtacccaatgaggttccaggattccattgatattgtg 775 |||||||||||||||| || || ||||| |||||||||||||||||||||||||| || Sbjct: 131520 caggcagacaaagttacagtagtataccctatgaggttccaggattccattgatatagtt 131579 Query: 776 ttagcaacttc 786 ||||||||||| Sbjct: 131580 ttagcaacttc 131590 >gb|AY111625.1| Zea mays CL55281_1 mRNA sequence Length = 637 Score = 250 bits (126), Expect = 1e-62 Identities = 237/274 (86%) Strand = Plus / Plus Query: 271 cagtggcgacaagggcgtggacatcgattgccacacggtggaatacgacgatgtgcggta 330 ||||||||| |||||| ||||||| || || |||||||| || | ||| ||||| ||||| Sbjct: 364 cagtggcgagaagggcatggacattgactgtcacacggtagagttcgatgatgtccggta 423 Query: 331 tcatatccagttttctatgaggaatccaaaggtaatggtgctatcagtggcattgcccct 390 |||||||||||||||||||||||||||||||||||||||| | ||||| || ||||| || Sbjct: 424 tcatatccagttttctatgaggaatccaaaggtaatggtgttgtcagttgctttgcctct 483 Query: 391 cccgcctcctgaggcaattctatatgatgggcttccacttggcactattgaggctataaa 450 || |||||||| || ||||| ||||||||||| ||||| || | ||||| |||||||| Sbjct: 484 gccacctcctgaagcgattctgtatgatgggctaccactaggtgccattgaagctataaa 543 Query: 451 ggcagcttatgggccagttgttcaaattcttgatcctccaaaggatggctttgatctcac 510 ||||| |||||||||||||| || |||||||||||||||||||| || ||||||||||| Sbjct: 544 agcagcatatgggccagttgtgcagattcttgatcctccaaaggacgggtttgatctcac 603 Query: 511 aatgaagataaacctaacaaagcttccgccagat 544 |||||||||||| | ||||| ||||||| |||| Sbjct: 604 aatgaagataaatttgacaaaacttccgctagat 637 >ref|NM_001050282.1| Oryza sativa (japonica cultivar-group) Os01g0654300 (Os01g0654300) mRNA, partial cds Length = 610 Score = 236 bits (119), Expect = 2e-58 Identities = 155/167 (92%) Strand = Plus / Plus Query: 980 agtttgttaacttttcatgcttatgtaagctaccatgtaaagtgttctgaaggattcatg 1039 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1 agtttgttgacttttcatgcttatgtaagctaccatgtgaagtgttctgaaggattcatg 60 Query: 1040 cacaccaggatgaggcgaagagttgagtcgctgatccaggctttggaccgtgcaaaatcc 1099 |||||||||||||| || ||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 61 cacaccaggatgagacgtagagttgagacgctgatccaggctttggatcgtgcaaaatct 120 Query: 1100 gatgcagagaagttgaagaaattggtgcacgggggatcttttaaaag 1146 |||||||||||||||||||| |||||| | || |||||||| ||||| Sbjct: 121 gatgcagagaagttgaagaagttggtgaatggtggatctttcaaaag 167 >dbj|AK058593.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-G12, full insert sequence Length = 610 Score = 236 bits (119), Expect = 2e-58 Identities = 155/167 (92%) Strand = Plus / Plus Query: 980 agtttgttaacttttcatgcttatgtaagctaccatgtaaagtgttctgaaggattcatg 1039 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1 agtttgttgacttttcatgcttatgtaagctaccatgtgaagtgttctgaaggattcatg 60 Query: 1040 cacaccaggatgaggcgaagagttgagtcgctgatccaggctttggaccgtgcaaaatcc 1099 |||||||||||||| || ||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 61 cacaccaggatgagacgtagagttgagacgctgatccaggctttggatcgtgcaaaatct 120 Query: 1100 gatgcagagaagttgaagaaattggtgcacgggggatcttttaaaag 1146 |||||||||||||||||||| |||||| | || |||||||| ||||| Sbjct: 121 gatgcagagaagttgaagaagttggtgaatggtggatctttcaaaag 167