BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem208n17 (1236 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001050690.1| Oryza sativa (japonica cultivar-group) Os01g... 404 e-109 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 404 e-109 dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic D... 404 e-109 dbj|AK108391.1| Oryza sativa (japonica cultivar-group) cDNA clon... 404 e-109 >ref|NM_001050690.1| Oryza sativa (japonica cultivar-group) Os01g0732300 (Os01g0732300) mRNA, complete cds Length = 1255 Score = 404 bits (204), Expect = e-109 Identities = 312/348 (89%) Strand = Plus / Plus Query: 603 aggctctcgacccactcgtcgcgcaggctcgtgagcagctcgtcctccgacgacgagtac 662 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 595 aggctctcgacgcactcgtcgcgcaggctgatgagcagctcgtcctccgacgacgagtac 654 Query: 663 gacgaggactcgcgaaacctcttctcctcgagaagcttctcctccgactcgtcggacttc 722 |||||||||||| | |||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 655 gacgaggactcgaggaacctcttctcctccaggagcttttcctccgactcgtcggacttc 714 Query: 723 tacaactgtccgcacaagaacaccaaggcgcgcgcctcggtgtccggcccgtgccgcgcc 782 |||||||| |||| ||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 715 tacaactgcccgcgcaagaacaccagggcgcgcgcctcagtgtccggcccgtgccgcgcg 774 Query: 783 ccgccggccgctgcgcggcgaggggcgtcgcagagctgccgttacagcttcgagctgccg 842 |||||| | | |||| || || |||||||||||||||| |||||||||||||| ||| Sbjct: 775 ccgccgccatcctcgcgccgcggcacgtcgcagagctgccggtacagcttcgagcttccg 834 Query: 843 cgaggctcgacggcgtccgccgcgacggacggcgggttcgcggtggtgaagcggtcggcc 902 || ||||||||||| || || || || |||||||||||||||||||||||||||||| || Sbjct: 835 cgcggctcgacggcttcggcggcaaccgacggcgggttcgcggtggtgaagcggtcgtcc 894 Query: 903 gacccgtatgaggacttccacaagtccatggaggagatgatcgccgag 950 ||||| || |||||||||| ||| || ||||||||||||||||||||| Sbjct: 895 gacccctacgaggacttccgcaaatcaatggaggagatgatcgccgag 942 Score = 266 bits (134), Expect = 2e-67 Identities = 259/301 (86%), Gaps = 6/301 (1%) Strand = Plus / Plus Query: 253 cgccgccgccgctggcactgccctcctactcccgcctcgg------gggcggcaagaagg 306 ||||||||||||||||| | ||||| |||||||||||||| |||||||||||||| Sbjct: 248 cgccgccgccgctggcattcccctcttactcccgcctcggcggcgcgggcggcaagaagg 307 Query: 307 ttggtgggggccagcacgaccgcaggctctccgtctcggccccgcgccccgcgccgctga 366 | | ||| ||||||| ||| |||||||| | |||| |||||||| |||||||| Sbjct: 308 cggccgcggggaagcacgagcgccggctctccctgtcggtgccgcgcccgccgccgctgg 367 Query: 367 tccacttcaccatcgactgcgccggccgccgctccgtcgacgctgccgacccgtccctcc 426 || | ||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 368 tcaatatcaccatcgactgcgccggccgccgctccgtcgacgcggcggacccgtccctcc 427 Query: 427 tcgcgccgctcgacgcggacgccaagaaggtggagaagcggctcacggagaccgggctgc 486 |||||||||||||| ||||||| |||| |||||| ||||||||||| ||| ||||||| Sbjct: 428 tcgcgccgctcgacctcgacgccaggaagatggagaggcggctcacggggacggggctgc 487 Query: 487 cgtacgagaccggcgagtgggagggccgcatgtgcccgccctcctcgccgttcgcctcgg 546 |||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| ||| Sbjct: 488 cgtacgagaccggcgagtgggagggccgcaagtgcccgccctccacgcctttcgccgcgg 547 Query: 547 c 547 | Sbjct: 548 c 548 Score = 174 bits (88), Expect = 5e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 966 gacggcgagcacagcgcggagcggctgctcgagacgtacctggtgctcaactcgccgcgg 1025 ||||| |||| |||||||||||||||||| ||||| ||||| |||||||||||||||||| Sbjct: 970 gacggggagctcagcgcggagcggctgctggagacctacctcgtgctcaactcgccgcgg 1029 Query: 1026 cattacccggcgatcctcgcggcgttcgcggacgtgcgggagacgctcttcccctgaact 1085 |||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1030 cattaccccgcgatcctcgcggcgttcgccgacgtgcgggagacgcttttcccctgaatc 1089 Query: 1086 cgacggccgatcggcc 1101 || || |||||||||| Sbjct: 1090 cgtcgaccgatcggcc 1105 Score = 81.8 bits (41), Expect = 6e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 152 cggctccggcaccggccgcaagaagctgaaacaccggctcgcggcaatcctctcggcctt 211 |||||| ||| |||| |||||||||||||| ||| ||||||| || |||||||||| ||| Sbjct: 126 cggctcaggcgccgggcgcaagaagctgaagcacaggctcgctgccatcctctcggtctt 185 Query: 212 ctccaggcgagctgggggcaggaagcgacgcgacgaggagg 252 | ||||||| || || | ||||||||| |||| |||||||| Sbjct: 186 caccaggcgggcaggtgacaggaagcgccgcggcgaggagg 226 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 404 bits (204), Expect = e-109 Identities = 312/348 (89%) Strand = Plus / Plus Query: 603 aggctctcgacccactcgtcgcgcaggctcgtgagcagctcgtcctccgacgacgagtac 662 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 30536652 aggctctcgacgcactcgtcgcgcaggctgatgagcagctcgtcctccgacgacgagtac 30536711 Query: 663 gacgaggactcgcgaaacctcttctcctcgagaagcttctcctccgactcgtcggacttc 722 |||||||||||| | |||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 30536712 gacgaggactcgaggaacctcttctcctccaggagcttttcctccgactcgtcggacttc 30536771 Query: 723 tacaactgtccgcacaagaacaccaaggcgcgcgcctcggtgtccggcccgtgccgcgcc 782 |||||||| |||| ||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 30536772 tacaactgcccgcgcaagaacaccagggcgcgcgcctcagtgtccggcccgtgccgcgcg 30536831 Query: 783 ccgccggccgctgcgcggcgaggggcgtcgcagagctgccgttacagcttcgagctgccg 842 |||||| | | |||| || || |||||||||||||||| |||||||||||||| ||| Sbjct: 30536832 ccgccgccatcctcgcgccgcggcacgtcgcagagctgccggtacagcttcgagcttccg 30536891 Query: 843 cgaggctcgacggcgtccgccgcgacggacggcgggttcgcggtggtgaagcggtcggcc 902 || ||||||||||| || || || || |||||||||||||||||||||||||||||| || Sbjct: 30536892 cgcggctcgacggcttcggcggcaaccgacggcgggttcgcggtggtgaagcggtcgtcc 30536951 Query: 903 gacccgtatgaggacttccacaagtccatggaggagatgatcgccgag 950 ||||| || |||||||||| ||| || ||||||||||||||||||||| Sbjct: 30536952 gacccctacgaggacttccgcaaatcaatggaggagatgatcgccgag 30536999 Score = 266 bits (134), Expect = 2e-67 Identities = 259/301 (86%), Gaps = 6/301 (1%) Strand = Plus / Plus Query: 253 cgccgccgccgctggcactgccctcctactcccgcctcgg------gggcggcaagaagg 306 ||||||||||||||||| | ||||| |||||||||||||| |||||||||||||| Sbjct: 30536305 cgccgccgccgctggcattcccctcttactcccgcctcggcggcgcgggcggcaagaagg 30536364 Query: 307 ttggtgggggccagcacgaccgcaggctctccgtctcggccccgcgccccgcgccgctga 366 | | ||| ||||||| ||| |||||||| | |||| |||||||| |||||||| Sbjct: 30536365 cggccgcggggaagcacgagcgccggctctccctgtcggtgccgcgcccgccgccgctgg 30536424 Query: 367 tccacttcaccatcgactgcgccggccgccgctccgtcgacgctgccgacccgtccctcc 426 || | ||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 30536425 tcaatatcaccatcgactgcgccggccgccgctccgtcgacgcggcggacccgtccctcc 30536484 Query: 427 tcgcgccgctcgacgcggacgccaagaaggtggagaagcggctcacggagaccgggctgc 486 |||||||||||||| ||||||| |||| |||||| ||||||||||| ||| ||||||| Sbjct: 30536485 tcgcgccgctcgacctcgacgccaggaagatggagaggcggctcacggggacggggctgc 30536544 Query: 487 cgtacgagaccggcgagtgggagggccgcatgtgcccgccctcctcgccgttcgcctcgg 546 |||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| ||| Sbjct: 30536545 cgtacgagaccggcgagtgggagggccgcaagtgcccgccctccacgcctttcgccgcgg 30536604 Query: 547 c 547 | Sbjct: 30536605 c 30536605 Score = 174 bits (88), Expect = 5e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 966 gacggcgagcacagcgcggagcggctgctcgagacgtacctggtgctcaactcgccgcgg 1025 ||||| |||| |||||||||||||||||| ||||| ||||| |||||||||||||||||| Sbjct: 30537027 gacggggagctcagcgcggagcggctgctggagacctacctcgtgctcaactcgccgcgg 30537086 Query: 1026 cattacccggcgatcctcgcggcgttcgcggacgtgcgggagacgctcttcccctgaact 1085 |||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 30537087 cattaccccgcgatcctcgcggcgttcgccgacgtgcgggagacgcttttcccctgaatc 30537146 Query: 1086 cgacggccgatcggcc 1101 || || |||||||||| Sbjct: 30537147 cgtcgaccgatcggcc 30537162 Score = 81.8 bits (41), Expect = 6e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 152 cggctccggcaccggccgcaagaagctgaaacaccggctcgcggcaatcctctcggcctt 211 |||||| ||| |||| |||||||||||||| ||| ||||||| || |||||||||| ||| Sbjct: 30536183 cggctcaggcgccgggcgcaagaagctgaagcacaggctcgctgccatcctctcggtctt 30536242 Query: 212 ctccaggcgagctgggggcaggaagcgacgcgacgaggagg 252 | ||||||| || || | ||||||||| |||| |||||||| Sbjct: 30536243 caccaggcgggcaggtgacaggaagcgccgcggcgaggagg 30536283 >dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0036G09 Length = 124118 Score = 404 bits (204), Expect = e-109 Identities = 312/348 (89%) Strand = Plus / Plus Query: 603 aggctctcgacccactcgtcgcgcaggctcgtgagcagctcgtcctccgacgacgagtac 662 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 19256 aggctctcgacgcactcgtcgcgcaggctgatgagcagctcgtcctccgacgacgagtac 19315 Query: 663 gacgaggactcgcgaaacctcttctcctcgagaagcttctcctccgactcgtcggacttc 722 |||||||||||| | |||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 19316 gacgaggactcgaggaacctcttctcctccaggagcttttcctccgactcgtcggacttc 19375 Query: 723 tacaactgtccgcacaagaacaccaaggcgcgcgcctcggtgtccggcccgtgccgcgcc 782 |||||||| |||| ||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 19376 tacaactgcccgcgcaagaacaccagggcgcgcgcctcagtgtccggcccgtgccgcgcg 19435 Query: 783 ccgccggccgctgcgcggcgaggggcgtcgcagagctgccgttacagcttcgagctgccg 842 |||||| | | |||| || || |||||||||||||||| |||||||||||||| ||| Sbjct: 19436 ccgccgccatcctcgcgccgcggcacgtcgcagagctgccggtacagcttcgagcttccg 19495 Query: 843 cgaggctcgacggcgtccgccgcgacggacggcgggttcgcggtggtgaagcggtcggcc 902 || ||||||||||| || || || || |||||||||||||||||||||||||||||| || Sbjct: 19496 cgcggctcgacggcttcggcggcaaccgacggcgggttcgcggtggtgaagcggtcgtcc 19555 Query: 903 gacccgtatgaggacttccacaagtccatggaggagatgatcgccgag 950 ||||| || |||||||||| ||| || ||||||||||||||||||||| Sbjct: 19556 gacccctacgaggacttccgcaaatcaatggaggagatgatcgccgag 19603 Score = 266 bits (134), Expect = 2e-67 Identities = 259/301 (86%), Gaps = 6/301 (1%) Strand = Plus / Plus Query: 253 cgccgccgccgctggcactgccctcctactcccgcctcgg------gggcggcaagaagg 306 ||||||||||||||||| | ||||| |||||||||||||| |||||||||||||| Sbjct: 18909 cgccgccgccgctggcattcccctcttactcccgcctcggcggcgcgggcggcaagaagg 18968 Query: 307 ttggtgggggccagcacgaccgcaggctctccgtctcggccccgcgccccgcgccgctga 366 | | ||| ||||||| ||| |||||||| | |||| |||||||| |||||||| Sbjct: 18969 cggccgcggggaagcacgagcgccggctctccctgtcggtgccgcgcccgccgccgctgg 19028 Query: 367 tccacttcaccatcgactgcgccggccgccgctccgtcgacgctgccgacccgtccctcc 426 || | ||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 19029 tcaatatcaccatcgactgcgccggccgccgctccgtcgacgcggcggacccgtccctcc 19088 Query: 427 tcgcgccgctcgacgcggacgccaagaaggtggagaagcggctcacggagaccgggctgc 486 |||||||||||||| ||||||| |||| |||||| ||||||||||| ||| ||||||| Sbjct: 19089 tcgcgccgctcgacctcgacgccaggaagatggagaggcggctcacggggacggggctgc 19148 Query: 487 cgtacgagaccggcgagtgggagggccgcatgtgcccgccctcctcgccgttcgcctcgg 546 |||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| ||| Sbjct: 19149 cgtacgagaccggcgagtgggagggccgcaagtgcccgccctccacgcctttcgccgcgg 19208 Query: 547 c 547 | Sbjct: 19209 c 19209 Score = 174 bits (88), Expect = 5e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 966 gacggcgagcacagcgcggagcggctgctcgagacgtacctggtgctcaactcgccgcgg 1025 ||||| |||| |||||||||||||||||| ||||| ||||| |||||||||||||||||| Sbjct: 19631 gacggggagctcagcgcggagcggctgctggagacctacctcgtgctcaactcgccgcgg 19690 Query: 1026 cattacccggcgatcctcgcggcgttcgcggacgtgcgggagacgctcttcccctgaact 1085 |||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 19691 cattaccccgcgatcctcgcggcgttcgccgacgtgcgggagacgcttttcccctgaatc 19750 Query: 1086 cgacggccgatcggcc 1101 || || |||||||||| Sbjct: 19751 cgtcgaccgatcggcc 19766 Score = 81.8 bits (41), Expect = 6e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 152 cggctccggcaccggccgcaagaagctgaaacaccggctcgcggcaatcctctcggcctt 211 |||||| ||| |||| |||||||||||||| ||| ||||||| || |||||||||| ||| Sbjct: 18787 cggctcaggcgccgggcgcaagaagctgaagcacaggctcgctgccatcctctcggtctt 18846 Query: 212 ctccaggcgagctgggggcaggaagcgacgcgacgaggagg 252 | ||||||| || || | ||||||||| |||| |||||||| Sbjct: 18847 caccaggcgggcaggtgacaggaagcgccgcggcgaggagg 18887 >dbj|AK108391.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-F05, full insert sequence Length = 1259 Score = 404 bits (204), Expect = e-109 Identities = 312/348 (89%) Strand = Plus / Plus Query: 603 aggctctcgacccactcgtcgcgcaggctcgtgagcagctcgtcctccgacgacgagtac 662 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 599 aggctctcgacgcactcgtcgcgcaggctgatgagcagctcgtcctccgacgacgagtac 658 Query: 663 gacgaggactcgcgaaacctcttctcctcgagaagcttctcctccgactcgtcggacttc 722 |||||||||||| | |||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 659 gacgaggactcgaggaacctcttctcctccaggagcttttcctccgactcgtcggacttc 718 Query: 723 tacaactgtccgcacaagaacaccaaggcgcgcgcctcggtgtccggcccgtgccgcgcc 782 |||||||| |||| ||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 719 tacaactgcccgcgcaagaacaccagggcgcgcgcctcagtgtccggcccgtgccgcgcg 778 Query: 783 ccgccggccgctgcgcggcgaggggcgtcgcagagctgccgttacagcttcgagctgccg 842 |||||| | | |||| || || |||||||||||||||| |||||||||||||| ||| Sbjct: 779 ccgccgccatcctcgcgccgcggcacgtcgcagagctgccggtacagcttcgagcttccg 838 Query: 843 cgaggctcgacggcgtccgccgcgacggacggcgggttcgcggtggtgaagcggtcggcc 902 || ||||||||||| || || || || |||||||||||||||||||||||||||||| || Sbjct: 839 cgcggctcgacggcttcggcggcaaccgacggcgggttcgcggtggtgaagcggtcgtcc 898 Query: 903 gacccgtatgaggacttccacaagtccatggaggagatgatcgccgag 950 ||||| || |||||||||| ||| || ||||||||||||||||||||| Sbjct: 899 gacccctacgaggacttccgcaaatcaatggaggagatgatcgccgag 946 Score = 266 bits (134), Expect = 2e-67 Identities = 259/301 (86%), Gaps = 6/301 (1%) Strand = Plus / Plus Query: 253 cgccgccgccgctggcactgccctcctactcccgcctcgg------gggcggcaagaagg 306 ||||||||||||||||| | ||||| |||||||||||||| |||||||||||||| Sbjct: 252 cgccgccgccgctggcattcccctcttactcccgcctcggcggcgcgggcggcaagaagg 311 Query: 307 ttggtgggggccagcacgaccgcaggctctccgtctcggccccgcgccccgcgccgctga 366 | | ||| ||||||| ||| |||||||| | |||| |||||||| |||||||| Sbjct: 312 cggccgcggggaagcacgagcgccggctctccctgtcggtgccgcgcccgccgccgctgg 371 Query: 367 tccacttcaccatcgactgcgccggccgccgctccgtcgacgctgccgacccgtccctcc 426 || | ||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 372 tcaatatcaccatcgactgcgccggccgccgctccgtcgacgcggcggacccgtccctcc 431 Query: 427 tcgcgccgctcgacgcggacgccaagaaggtggagaagcggctcacggagaccgggctgc 486 |||||||||||||| ||||||| |||| |||||| ||||||||||| ||| ||||||| Sbjct: 432 tcgcgccgctcgacctcgacgccaggaagatggagaggcggctcacggggacggggctgc 491 Query: 487 cgtacgagaccggcgagtgggagggccgcatgtgcccgccctcctcgccgttcgcctcgg 546 |||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| ||| Sbjct: 492 cgtacgagaccggcgagtgggagggccgcaagtgcccgccctccacgcctttcgccgcgg 551 Query: 547 c 547 | Sbjct: 552 c 552 Score = 174 bits (88), Expect = 5e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 966 gacggcgagcacagcgcggagcggctgctcgagacgtacctggtgctcaactcgccgcgg 1025 ||||| |||| |||||||||||||||||| ||||| ||||| |||||||||||||||||| Sbjct: 974 gacggggagctcagcgcggagcggctgctggagacctacctcgtgctcaactcgccgcgg 1033 Query: 1026 cattacccggcgatcctcgcggcgttcgcggacgtgcgggagacgctcttcccctgaact 1085 |||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1034 cattaccccgcgatcctcgcggcgttcgccgacgtgcgggagacgcttttcccctgaatc 1093 Query: 1086 cgacggccgatcggcc 1101 || || |||||||||| Sbjct: 1094 cgtcgaccgatcggcc 1109 Score = 81.8 bits (41), Expect = 6e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 152 cggctccggcaccggccgcaagaagctgaaacaccggctcgcggcaatcctctcggcctt 211 |||||| ||| |||| |||||||||||||| ||| ||||||| || |||||||||| ||| Sbjct: 130 cggctcaggcgccgggcgcaagaagctgaagcacaggctcgctgccatcctctcggtctt 189 Query: 212 ctccaggcgagctgggggcaggaagcgacgcgacgaggagg 252 | ||||||| || || | ||||||||| |||| |||||||| Sbjct: 190 caccaggcgggcaggtgacaggaagcgccgcggcgaggagg 230