BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem208l08 (1497 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT836258.1| Oryza sativa (indica cultivar-group) cDNA clone:... 159 4e-35 dbj|AK243284.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 159 4e-35 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 159 4e-35 dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic D... 159 4e-35 emb|AJ490368.1|OSA490368 Oryza sativa z157c snoRNA 151 1e-32 >emb|CT836258.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA113M05, full insert sequence Length = 1437 Score = 159 bits (80), Expect = 4e-35 Identities = 93/96 (96%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 133 tagaggttggagcggtgatgagcaattttttgtggactagagtttctgatactac-ttcg 191 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 129 tagatgttggagcggtgatgagcaattttttgtggactagagtttctgatactacttttg 188 Query: 192 tagtatttgaagaccaaacccttggctgtctgagct 227 |||||||||||||||||||||||||||||||||||| Sbjct: 189 tagtatttgaagaccaaacccttggctgtctgagct 224 Score = 157 bits (79), Expect = 2e-34 Identities = 137/155 (88%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 549 gattggatgcgtccattaccaattctggaggatgattcggttcctctcggtataatggct 608 |||| |||||||||||||||||||| ||||||| |||| |||| || ||||||||||||| Sbjct: 480 gattagatgcgtccattaccaattccggaggattattcagttcttcacggtataatggct 539 Query: 609 cgggcgctacatgctattct-ctgatgtgtggttatatcctgataggtggcgttcttggt 667 ||| ||| | ||| |||||| |||||||||||| |||||||||| | ||||||||||||| Sbjct: 540 cggacgccagatgatattcttctgatgtgtggtcatatcctgattgttggcgttcttggt 599 Query: 668 gctaatctgatcctggaaactccacatatattcac 702 || | ||| ||||||||||| |||||||||||||| Sbjct: 600 gccagtctaatcctggaaacgccacatatattcac 634 Score = 153 bits (77), Expect = 2e-33 Identities = 99/105 (94%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 309 agtggtgaagagcagtttttatgtggactagagtttctgatactgctacttttttggtag 368 |||||||| ||||| ||||||| ||||||||||||||||||||||||||||| | ||||| Sbjct: 313 agtggtgatgagcaatttttatttggactagagtttctgatactgctactttgt-ggtag 371 Query: 369 ttgaagaccaaacccttggctgtctgagctcccagatctcacaaa 413 |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 372 ttgaagaccaaacccttggctgtctgagcttccagatctcacaaa 416 Score = 141 bits (71), Expect = 9e-30 Identities = 103/111 (92%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 737 tttttgggatctaaatgatgcgaaactctgaaagggaaatcgtccaatccgttggattgt 796 |||| |||||||||||||||||||||||||||||| ||| ||||||||| | ||||||| Sbjct: 668 ttttggggatctaaatgatgcgaaactctgaaagg-aaagcgtccaatctgc-ggattgt 725 Query: 797 ggcgtgccatgacagttctttcatattgaataggaagatctgatagattcc 847 ||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 726 ggcgttccatgacatttctttcatattgaataggaagatctgatagattcc 776 Score = 103 bits (52), Expect = 2e-18 Identities = 82/90 (91%), Gaps = 4/90 (4%) Strand = Plus / Plus Query: 146 ggtgatgagcaattttt-tgtggactagagtttctgatact---acttcgtagtatttga 201 ||||||||||||||||| | ||||||||||||||||||||| |||| || ||| |||| Sbjct: 316 ggtgatgagcaatttttatttggactagagtttctgatactgctactttgtggtagttga 375 Query: 202 agaccaaacccttggctgtctgagcttcca 231 |||||||||||||||||||||||||||||| Sbjct: 376 agaccaaacccttggctgtctgagcttcca 405 Score = 99.6 bits (50), Expect = 3e-17 Identities = 86/96 (89%), Gaps = 4/96 (4%) Strand = Plus / Plus Query: 305 ttggagtggtgaagagcagtttttatgtggactagagtttctgatactgctacttttttg 364 |||||| ||||| ||||| ||||| ||||||||||||||||||||||| |||||| | Sbjct: 135 ttggagcggtgatgagcaattttt-tgtggactagagtttctgatact---acttttgta 190 Query: 365 gtagttgaagaccaaacccttggctgtctgagctcc 400 ||| |||||||||||||||||||||||||||||||| Sbjct: 191 gtatttgaagaccaaacccttggctgtctgagctcc 226 >dbj|AK243284.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100051M17, full insert sequence Length = 1454 Score = 159 bits (80), Expect = 4e-35 Identities = 93/96 (96%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 133 tagaggttggagcggtgatgagcaattttttgtggactagagtttctgatactac-ttcg 191 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 133 tagatgttggagcggtgatgagcaattttttgtggactagagtttctgatactacttttg 192 Query: 192 tagtatttgaagaccaaacccttggctgtctgagct 227 |||||||||||||||||||||||||||||||||||| Sbjct: 193 tagtatttgaagaccaaacccttggctgtctgagct 228 Score = 151 bits (76), Expect = 1e-32 Identities = 134/152 (88%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 549 gattggatgcgtccattaccaattctggaggatgattcggttcctctcggtataatggct 608 |||| |||||||||||||||||||| ||||||| |||| |||| || ||||||||||||| Sbjct: 484 gattagatgcgtccattaccaattccggaggattattcagttcttcacggtataatggct 543 Query: 609 cgggcgctacatgctattct-ctgatgtgtggttatatcctgataggtggcgttcttggt 667 ||| ||| | ||| |||||| |||||||||||| |||||||||| | ||||||||||||| Sbjct: 544 cggacgccagatgatattcttctgatgtgtggtcatatcctgattgttggcgttcttggt 603 Query: 668 gctaatctgatcctggaaactccacatatatt 699 || | ||| ||||||||||| ||||||||||| Sbjct: 604 gccagtctaatcctggaaacgccacatatatt 635 Score = 147 bits (74), Expect = 2e-31 Identities = 96/102 (94%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 312 ggtgaagagcagtttttatgtggactagagtttctgatactgctacttttttggtagttg 371 ||||| ||||| ||||||| ||||||||||||||||||||||||||||| | |||||||| Sbjct: 320 ggtgatgagcaatttttatttggactagagtttctgatactgctactttgt-ggtagttg 378 Query: 372 aagaccaaacccttggctgtctgagctcccagatctcacaaa 413 ||||||||||||||||||||||||||| |||||||||||||| Sbjct: 379 aagaccaaacccttggctgtctgagcttccagatctcacaaa 420 Score = 141 bits (71), Expect = 9e-30 Identities = 103/111 (92%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 737 tttttgggatctaaatgatgcgaaactctgaaagggaaatcgtccaatccgttggattgt 796 |||| |||||||||||||||||||||||||||||| ||| ||||||||| | ||||||| Sbjct: 671 ttttggggatctaaatgatgcgaaactctgaaagg-aaagcgtccaatctgc-ggattgt 728 Query: 797 ggcgtgccatgacagttctttcatattgaataggaagatctgatagattcc 847 ||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 ggcgttccatgacatttctttcatattgaataggaagatctgatagattcc 779 Score = 109 bits (55), Expect = 3e-20 Identities = 85/93 (91%), Gaps = 4/93 (4%) Strand = Plus / Plus Query: 143 agcggtgatgagcaattttt-tgtggactagagtttctgatact---acttcgtagtatt 198 |||||||||||||||||||| | ||||||||||||||||||||| |||| || ||| | Sbjct: 317 agcggtgatgagcaatttttatttggactagagtttctgatactgctactttgtggtagt 376 Query: 199 tgaagaccaaacccttggctgtctgagcttcca 231 ||||||||||||||||||||||||||||||||| Sbjct: 377 tgaagaccaaacccttggctgtctgagcttcca 409 Score = 99.6 bits (50), Expect = 3e-17 Identities = 86/96 (89%), Gaps = 4/96 (4%) Strand = Plus / Plus Query: 305 ttggagtggtgaagagcagtttttatgtggactagagtttctgatactgctacttttttg 364 |||||| ||||| ||||| ||||| ||||||||||||||||||||||| |||||| | Sbjct: 139 ttggagcggtgatgagcaattttt-tgtggactagagtttctgatact---acttttgta 194 Query: 365 gtagttgaagaccaaacccttggctgtctgagctcc 400 ||| |||||||||||||||||||||||||||||||| Sbjct: 195 gtatttgaagaccaaacccttggctgtctgagctcc 230 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 159 bits (80), Expect = 4e-35 Identities = 93/96 (96%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 133 tagaggttggagcggtgatgagcaattttttgtggactagagtttctgatactac-ttcg 191 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 28063012 tagatgttggagcggtgatgagcaattttttgtggactagagtttctgatactacttttg 28063071 Query: 192 tagtatttgaagaccaaacccttggctgtctgagct 227 |||||||||||||||||||||||||||||||||||| Sbjct: 28063072 tagtatttgaagaccaaacccttggctgtctgagct 28063107 Score = 151 bits (76), Expect = 1e-32 Identities = 134/152 (88%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 549 gattggatgcgtccattaccaattctggaggatgattcggttcctctcggtataatggct 608 |||| |||||||||||||||||||| ||||||| |||| |||| || ||||||||||||| Sbjct: 28063363 gattagatgcgtccattaccaattccggaggattattcagttcttcacggtataatggct 28063422 Query: 609 cgggcgctacatgctattct-ctgatgtgtggttatatcctgataggtggcgttcttggt 667 ||| ||| | ||| |||||| |||||||||||| |||||||||| | ||||||||||||| Sbjct: 28063423 cggacgccagatgatattcttctgatgtgtggtcatatcctgattgttggcgttcttggt 28063482 Query: 668 gctaatctgatcctggaaactccacatatatt 699 || | ||| ||||||||||| ||||||||||| Sbjct: 28063483 gccagtctaatcctggaaacgccacatatatt 28063514 Score = 147 bits (74), Expect = 2e-31 Identities = 96/102 (94%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 312 ggtgaagagcagtttttatgtggactagagtttctgatactgctacttttttggtagttg 371 ||||| ||||| ||||||| ||||||||||||||||||||||||||||| | |||||||| Sbjct: 28063199 ggtgatgagcaatttttatttggactagagtttctgatactgctactttgt-ggtagttg 28063257 Query: 372 aagaccaaacccttggctgtctgagctcccagatctcacaaa 413 ||||||||||||||||||||||||||| |||||||||||||| Sbjct: 28063258 aagaccaaacccttggctgtctgagcttccagatctcacaaa 28063299 Score = 141 bits (71), Expect = 9e-30 Identities = 103/111 (92%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 737 tttttgggatctaaatgatgcgaaactctgaaagggaaatcgtccaatccgttggattgt 796 |||| |||||||||||||||||||||||||||||| ||| ||||||||| | ||||||| Sbjct: 28063550 ttttggggatctaaatgatgcgaaactctgaaagg-aaagcgtccaatctgc-ggattgt 28063607 Query: 797 ggcgtgccatgacagttctttcatattgaataggaagatctgatagattcc 847 ||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 28063608 ggcgttccatgacatttctttcatattgaataggaagatctgatagattcc 28063658 Score = 109 bits (55), Expect = 3e-20 Identities = 85/93 (91%), Gaps = 4/93 (4%) Strand = Plus / Plus Query: 143 agcggtgatgagcaattttt-tgtggactagagtttctgatact---acttcgtagtatt 198 |||||||||||||||||||| | ||||||||||||||||||||| |||| || ||| | Sbjct: 28063196 agcggtgatgagcaatttttatttggactagagtttctgatactgctactttgtggtagt 28063255 Query: 199 tgaagaccaaacccttggctgtctgagcttcca 231 ||||||||||||||||||||||||||||||||| Sbjct: 28063256 tgaagaccaaacccttggctgtctgagcttcca 28063288 Score = 99.6 bits (50), Expect = 3e-17 Identities = 86/96 (89%), Gaps = 4/96 (4%) Strand = Plus / Plus Query: 305 ttggagtggtgaagagcagtttttatgtggactagagtttctgatactgctacttttttg 364 |||||| ||||| ||||| ||||| ||||||||||||||||||||||| |||||| | Sbjct: 28063018 ttggagcggtgatgagcaattttt-tgtggactagagtttctgatact---acttttgta 28063073 Query: 365 gtagttgaagaccaaacccttggctgtctgagctcc 400 ||| |||||||||||||||||||||||||||||||| Sbjct: 28063074 gtatttgaagaccaaacccttggctgtctgagctcc 28063109 >dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 159 bits (80), Expect = 4e-35 Identities = 93/96 (96%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 133 tagaggttggagcggtgatgagcaattttttgtggactagagtttctgatactac-ttcg 191 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 107831 tagatgttggagcggtgatgagcaattttttgtggactagagtttctgatactacttttg 107890 Query: 192 tagtatttgaagaccaaacccttggctgtctgagct 227 |||||||||||||||||||||||||||||||||||| Sbjct: 107891 tagtatttgaagaccaaacccttggctgtctgagct 107926 Score = 151 bits (76), Expect = 1e-32 Identities = 134/152 (88%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 549 gattggatgcgtccattaccaattctggaggatgattcggttcctctcggtataatggct 608 |||| |||||||||||||||||||| ||||||| |||| |||| || ||||||||||||| Sbjct: 108182 gattagatgcgtccattaccaattccggaggattattcagttcttcacggtataatggct 108241 Query: 609 cgggcgctacatgctattct-ctgatgtgtggttatatcctgataggtggcgttcttggt 667 ||| ||| | ||| |||||| |||||||||||| |||||||||| | ||||||||||||| Sbjct: 108242 cggacgccagatgatattcttctgatgtgtggtcatatcctgattgttggcgttcttggt 108301 Query: 668 gctaatctgatcctggaaactccacatatatt 699 || | ||| ||||||||||| ||||||||||| Sbjct: 108302 gccagtctaatcctggaaacgccacatatatt 108333 Score = 147 bits (74), Expect = 2e-31 Identities = 96/102 (94%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 312 ggtgaagagcagtttttatgtggactagagtttctgatactgctacttttttggtagttg 371 ||||| ||||| ||||||| ||||||||||||||||||||||||||||| | |||||||| Sbjct: 108018 ggtgatgagcaatttttatttggactagagtttctgatactgctactttgt-ggtagttg 108076 Query: 372 aagaccaaacccttggctgtctgagctcccagatctcacaaa 413 ||||||||||||||||||||||||||| |||||||||||||| Sbjct: 108077 aagaccaaacccttggctgtctgagcttccagatctcacaaa 108118 Score = 141 bits (71), Expect = 9e-30 Identities = 103/111 (92%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 737 tttttgggatctaaatgatgcgaaactctgaaagggaaatcgtccaatccgttggattgt 796 |||| |||||||||||||||||||||||||||||| ||| ||||||||| | ||||||| Sbjct: 108369 ttttggggatctaaatgatgcgaaactctgaaagg-aaagcgtccaatctgc-ggattgt 108426 Query: 797 ggcgtgccatgacagttctttcatattgaataggaagatctgatagattcc 847 ||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 108427 ggcgttccatgacatttctttcatattgaataggaagatctgatagattcc 108477 Score = 109 bits (55), Expect = 3e-20 Identities = 85/93 (91%), Gaps = 4/93 (4%) Strand = Plus / Plus Query: 143 agcggtgatgagcaattttt-tgtggactagagtttctgatact---acttcgtagtatt 198 |||||||||||||||||||| | ||||||||||||||||||||| |||| || ||| | Sbjct: 108015 agcggtgatgagcaatttttatttggactagagtttctgatactgctactttgtggtagt 108074 Query: 199 tgaagaccaaacccttggctgtctgagcttcca 231 ||||||||||||||||||||||||||||||||| Sbjct: 108075 tgaagaccaaacccttggctgtctgagcttcca 108107 Score = 99.6 bits (50), Expect = 3e-17 Identities = 86/96 (89%), Gaps = 4/96 (4%) Strand = Plus / Plus Query: 305 ttggagtggtgaagagcagtttttatgtggactagagtttctgatactgctacttttttg 364 |||||| ||||| ||||| ||||| ||||||||||||||||||||||| |||||| | Sbjct: 107837 ttggagcggtgatgagcaattttt-tgtggactagagtttctgatact---acttttgta 107892 Query: 365 gtagttgaagaccaaacccttggctgtctgagctcc 400 ||| |||||||||||||||||||||||||||||||| Sbjct: 107893 gtatttgaagaccaaacccttggctgtctgagctcc 107928 >emb|AJ490368.1|OSA490368 Oryza sativa z157c snoRNA Length = 90 Score = 151 bits (76), Expect = 1e-32 Identities = 86/88 (97%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 141 ggagcggtgatgagcaattttttgtggactagagtttctgatactac-ttcgtagtattt 199 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 1 ggagcggtgatgagcaattttttgtggactagagtttctgatactacttttgtagtattt 60 Query: 200 gaagaccaaacccttggctgtctgagct 227 |||||||||||||||||||||||||||| Sbjct: 61 gaagaccaaacccttggctgtctgagct 88 Score = 95.6 bits (48), Expect = 5e-16 Identities = 84/94 (89%), Gaps = 4/94 (4%) Strand = Plus / Plus Query: 307 ggagtggtgaagagcagtttttatgtggactagagtttctgatactgctacttttttggt 366 |||| ||||| ||||| ||||| ||||||||||||||||||||||| |||||| | || Sbjct: 1 ggagcggtgatgagcaattttt-tgtggactagagtttctgatact---acttttgtagt 56 Query: 367 agttgaagaccaaacccttggctgtctgagctcc 400 | |||||||||||||||||||||||||||||||| Sbjct: 57 atttgaagaccaaacccttggctgtctgagctcc 90