BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem208f09 (1099 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001059246.1| Oryza sativa (japonica cultivar-group) Os04g... 672 0.0 dbj|AK101565.1| Oryza sativa (japonica cultivar-group) cDNA clon... 672 0.0 dbj|AK068579.1| Oryza sativa (japonica cultivar-group) cDNA clon... 672 0.0 gb|AY107406.1| Zea mays PCO075969 mRNA sequence 176 1e-40 emb|CR855110.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 172 2e-39 >ref|NM_001059246.1| Oryza sativa (japonica cultivar-group) Os04g0405600 (Os04g0405600) mRNA, complete cds Length = 2125 Score = 672 bits (339), Expect = 0.0 Identities = 513/571 (89%) Strand = Plus / Plus Query: 299 tccgacggatcgatacagctatactcccagatcgagagggtgatcacggaggcggcgaag 358 ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 375 tccgagggatcgatacagctctactcgcagatcgagagggtgatcacggaggcggcgaag 434 Query: 359 cagtccagcgagggctggggttcgaccggagattggaccgaaatcgagggagcgtgggtg 418 |||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 435 cagtcccgggagggctggggttcgaccggagattggaccgagatcgagggagcgtgggtg 494 Query: 419 ttgagacccaagtcctcggagccctcgtttgttgttcatttcgttggtgggatttttgtt 478 ||| || || || |||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 495 ctgaagcctaaatcacaggagccctcgttcgttgttcacttcgttggtgggatttttgtt 554 Query: 479 ggagccgcgccgcagatcacataccgcttcttcctcgagcgtctcgcggacaggggagct 538 ||||| || || |||||||| || || |||||||| || || || || |||| ||||||| Sbjct: 555 ggagctgctcctcagatcacttatcgtttcttccttgaacgacttgcagacaagggagct 614 Query: 539 ttggtgattgctacaccatacgctagcggctttgaccatttcttcatcgcggatgaagtt 598 |||||||| || || ||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct: 615 ttggtgatcgcaacgccatatgctagcggctttgatcatttcttcatcgcagatgaagtt 674 Query: 599 caatttaagtttgacaggtgcttgagaaacatggttgaacctgtaaatgaccttcctaca 658 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 675 caatttaagtttgacaggtgcttaagaaacatggttgaacctgtaaatgaccttcccaca 734 Query: 659 tttggtgttggacattctttgggatctgtaatccatcttctgattggatcaaggtatgct 718 ||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 735 tttggtgttgggcattctttgggatctgtgatccaccttctcattggatcaagatacgct 794 Query: 719 gtgcagcgaagtggaaatgtattgatggcctttaacaacaaggaggcaagcttggcgatc 778 |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| | Sbjct: 795 gtgcagcgaagtggaaatatattgatggcctttaacaataaggaagcaagcttggcagtt 854 Query: 779 ccattattttcacctgtaatagttcccgtggcacagagctttggcccaatattatcccag 838 ||||||||||| |||||||| |||||| |||||||||| ||||| |||||||| |||||| Sbjct: 855 ccattattttcgcctgtaattgttcccatggcacagagttttgggccaatattttcccag 914 Query: 839 ctgacatcatatccaacgatccgttttgggg 869 |||||||||||||||| | |||||||||| Sbjct: 915 ttgacatcatatccaacacttcgttttgggg 945 >dbj|AK101565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050E24, full insert sequence Length = 1998 Score = 672 bits (339), Expect = 0.0 Identities = 513/571 (89%) Strand = Plus / Plus Query: 299 tccgacggatcgatacagctatactcccagatcgagagggtgatcacggaggcggcgaag 358 ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 337 tccgagggatcgatacagctctactcgcagatcgagagggtgatcacggaggcggcgaag 396 Query: 359 cagtccagcgagggctggggttcgaccggagattggaccgaaatcgagggagcgtgggtg 418 |||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 397 cagtcccgggagggctggggttcgaccggagattggaccgagatcgagggagcgtgggtg 456 Query: 419 ttgagacccaagtcctcggagccctcgtttgttgttcatttcgttggtgggatttttgtt 478 ||| || || || |||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 457 ctgaagcctaaatcacaggagccctcgttcgttgttcacttcgttggtgggatttttgtt 516 Query: 479 ggagccgcgccgcagatcacataccgcttcttcctcgagcgtctcgcggacaggggagct 538 ||||| || || |||||||| || || |||||||| || || || || |||| ||||||| Sbjct: 517 ggagctgctcctcagatcacttatcgtttcttccttgaacgacttgcagacaagggagct 576 Query: 539 ttggtgattgctacaccatacgctagcggctttgaccatttcttcatcgcggatgaagtt 598 |||||||| || || ||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct: 577 ttggtgatcgcaacgccatatgctagcggctttgatcatttcttcatcgcagatgaagtt 636 Query: 599 caatttaagtttgacaggtgcttgagaaacatggttgaacctgtaaatgaccttcctaca 658 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 637 caatttaagtttgacaggtgcttaagaaacatggttgaacctgtaaatgaccttcccaca 696 Query: 659 tttggtgttggacattctttgggatctgtaatccatcttctgattggatcaaggtatgct 718 ||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 697 tttggtgttgggcattctttgggatctgtgatccaccttctcattggatcaagatacgct 756 Query: 719 gtgcagcgaagtggaaatgtattgatggcctttaacaacaaggaggcaagcttggcgatc 778 |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| | Sbjct: 757 gtgcagcgaagtggaaatatattgatggcctttaacaataaggaagcaagcttggcagtt 816 Query: 779 ccattattttcacctgtaatagttcccgtggcacagagctttggcccaatattatcccag 838 ||||||||||| |||||||| |||||| |||||||||| ||||| |||||||| |||||| Sbjct: 817 ccattattttcgcctgtaattgttcccatggcacagagttttgggccaatattttcccag 876 Query: 839 ctgacatcatatccaacgatccgttttgggg 869 |||||||||||||||| | |||||||||| Sbjct: 877 ttgacatcatatccaacacttcgttttgggg 907 >dbj|AK068579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157C11, full insert sequence Length = 2126 Score = 672 bits (339), Expect = 0.0 Identities = 513/571 (89%) Strand = Plus / Plus Query: 299 tccgacggatcgatacagctatactcccagatcgagagggtgatcacggaggcggcgaag 358 ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 376 tccgagggatcgatacagctctactcgcagatcgagagggtgatcacggaggcggcgaag 435 Query: 359 cagtccagcgagggctggggttcgaccggagattggaccgaaatcgagggagcgtgggtg 418 |||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 436 cagtcccgggagggctggggttcgaccggagattggaccgagatcgagggagcgtgggtg 495 Query: 419 ttgagacccaagtcctcggagccctcgtttgttgttcatttcgttggtgggatttttgtt 478 ||| || || || |||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 496 ctgaagcctaaatcacaggagccctcgttcgttgttcacttcgttggtgggatttttgtt 555 Query: 479 ggagccgcgccgcagatcacataccgcttcttcctcgagcgtctcgcggacaggggagct 538 ||||| || || |||||||| || || |||||||| || || || || |||| ||||||| Sbjct: 556 ggagctgctcctcagatcacttatcgtttcttccttgaacgacttgcagacaagggagct 615 Query: 539 ttggtgattgctacaccatacgctagcggctttgaccatttcttcatcgcggatgaagtt 598 |||||||| || || ||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct: 616 ttggtgatcgcaacgccatatgctagcggctttgatcatttcttcatcgcagatgaagtt 675 Query: 599 caatttaagtttgacaggtgcttgagaaacatggttgaacctgtaaatgaccttcctaca 658 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 676 caatttaagtttgacaggtgcttaagaaacatggttgaacctgtaaatgaccttcccaca 735 Query: 659 tttggtgttggacattctttgggatctgtaatccatcttctgattggatcaaggtatgct 718 ||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 736 tttggtgttgggcattctttgggatctgtgatccaccttctcattggatcaagatacgct 795 Query: 719 gtgcagcgaagtggaaatgtattgatggcctttaacaacaaggaggcaagcttggcgatc 778 |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| | Sbjct: 796 gtgcagcgaagtggaaatatattgatggcctttaacaataaggaagcaagcttggcagtt 855 Query: 779 ccattattttcacctgtaatagttcccgtggcacagagctttggcccaatattatcccag 838 ||||||||||| |||||||| |||||| |||||||||| ||||| |||||||| |||||| Sbjct: 856 ccattattttcgcctgtaattgttcccatggcacagagttttgggccaatattttcccag 915 Query: 839 ctgacatcatatccaacgatccgttttgggg 869 |||||||||||||||| | |||||||||| Sbjct: 916 ttgacatcatatccaacacttcgttttgggg 946 >gb|AY107406.1| Zea mays PCO075969 mRNA sequence Length = 440 Score = 176 bits (89), Expect = 1e-40 Identities = 159/181 (87%), Gaps = 1/181 (0%) Strand = Plus / Plus Query: 296 ccttccgacggatcgatacagctatactcccagatcgagagggtgatcacggaggcggcg 355 ||||||||||| ||||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 260 ccttccgacgggtcgatacagctctattcccagatcgagagggtaatcacggaggcggca 319 Query: 356 aagcagtccagcgagggctggggttcgaccggagattggaccgaaat-cgagggagcgtg 414 ||||||||| | || |||||||||||||| ||||||||||||||| | ||||||| | || Sbjct: 320 aagcagtcccgggaaggctggggttcgactggagattggaccgaagtccgagggatcatg 379 Query: 415 ggtgttgagacccaagtcctcggagccctcgtttgttgttcatttcgttggtgggatttt 474 |||||||||||| ||||||| |||||| || |||||||| || || ||||| || ||||| Sbjct: 380 ggtgttgagaccgaagtccttggagccatcatttgttgtccactttgttggaggaatttt 439 Query: 475 t 475 | Sbjct: 440 t 440 >emb|CR855110.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0502B11, complete sequence Length = 113840 Score = 172 bits (87), Expect = 2e-39 Identities = 108/115 (93%) Strand = Plus / Minus Query: 530 aggggagctttggtgattgctacaccatacgctagcggctttgaccatttcttcatcgcg 589 ||||||||||||||||| || || ||||| |||||||||||||| |||||||||||||| Sbjct: 109075 aggggagctttggtgatcgcaacgccatatgctagcggctttgatcatttcttcatcgca 109016 Query: 590 gatgaagttcaatttaagtttgacaggtgcttgagaaacatggttgaacctgtaa 644 |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 109015 gatgaagttcaatttaagtttgacaggtgcttaagaaacatggttgaacctgtaa 108961 Score = 131 bits (66), Expect = 7e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 759 aggaggcaagcttggcgatcccattattttcacctgtaatagttcccgtggcacagagct 818 |||| ||||||||||| | ||||||||||| |||||||| |||||| |||||||||| | Sbjct: 107641 aggaagcaagcttggcagttccattattttcgcctgtaattgttcccatggcacagagtt 107582 Query: 819 ttggcccaatattatcccagctgacatcatatccaacgatccgttttggggtacgatgtg 878 |||| |||||||| |||||| |||||||||||||||| | ||||||||||||||||||| Sbjct: 107581 ttgggccaatattttcccagttgacatcatatccaacacttcgttttggggtacgatgtg 107522 Query: 879 tt 880 || Sbjct: 107521 tt 107520 Score = 121 bits (61), Expect = 6e-24 Identities = 70/73 (95%) Strand = Plus / Minus Query: 335 agggtgatcacggaggcggcgaagcagtccagcgagggctggggttcgaccggagattgg 394 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 109882 agggtgatcacggaggcggcgaagcagtcccgggagggctggggttcgaccggagattgg 109823 Query: 395 accgaaatcgagg 407 ||||| ||||||| Sbjct: 109822 accgagatcgagg 109810 Score = 91.7 bits (46), Expect = 6e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 436 ggagccctcgtttgttgttcatttcgttggtgggatttttgttggagccgcgccgcagat 495 |||||||||||| |||||||| |||||||||||||||||||||||||| || || ||||| Sbjct: 109682 ggagccctcgttcgttgttcacttcgttggtgggatttttgttggagctgctcctcagat 109623 Query: 496 cacataccgcttcttcct 513 ||| || || |||||||| Sbjct: 109622 cacttatcgtttcttcct 109605 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 641 gtaaatgaccttcctacatttggtgttggacattctttgggatctgtaatccatcttctg 700 |||||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 108890 gtaaatgaccttcccacatttggtgttgggcattctttgggatctgtgatccaccttctc 108831 Query: 701 attgg 705 ||||| Sbjct: 108830 attgg 108826 Score = 83.8 bits (42), Expect = 1e-12 Identities = 54/58 (93%) Strand = Plus / Minus Query: 704 ggatcaaggtatgctgtgcagcgaagtggaaatgtattgatggcctttaacaacaagg 761 |||||||| || ||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 108547 ggatcaagatacgctgtgcagcgaagtggaaatatattgatggcctttaacaataagg 108490