BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem207d11 (1417 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001064405.1| Oryza sativa (japonica cultivar-group) Os06g... 480 e-132 dbj|AK063332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 472 e-129 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 276 2e-70 dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic D... 276 2e-70 dbj|AP003762.3| Oryza sativa (japonica cultivar-group) genomic D... 174 6e-40 >ref|NM_001064405.1| Oryza sativa (japonica cultivar-group) Os06g0560700 (Os06g0560700) mRNA, complete cds Length = 1349 Score = 480 bits (242), Expect = e-132 Identities = 438/504 (86%), Gaps = 12/504 (2%) Strand = Plus / Plus Query: 179 gtgttcgtgttcgggagctcgctggtggacaacggcaacaacaacttcctcaccaactcc 238 ||||||||||||||||||||||||||||||||||||||||||||| ||| | | |||| Sbjct: 186 gtgttcgtgttcgggagctcgctggtggacaacggcaacaacaaccacctgaacggctcc 245 Query: 239 agcg---tgcgcgccgactacctgccctacggcgtcgacttcccgctcggcccgtccggc 295 ||| |||||||||||||| |||||||||||||||||||||||| ||| | ||||| Sbjct: 246 ggcgccgtgcgcgccgactacgcgccctacggcgtcgacttcccgctgggcgccaccggc 305 Query: 296 cgcttctccaacggccgcaacatcatcgacgcgctaggcgagctgctgcgcctccccggc 355 ||||||||||||||||||||| |||||||||| || || ||||| || |||||||||| | Sbjct: 306 cgcttctccaacggccgcaacgtcatcgacgccctcggggagctcctccgcctccccgcc 365 Query: 356 ggcggactcgtcccgcccttcgctgacccggctaccaggggccgcgccgcgctgcacggc 415 | ||| ||| ||||||| ||||| ||||| || ||| | ||||||||||| || |||||| Sbjct: 366 gccggcctcctcccgcctttcgccgaccccgccacccgcggccgcgccgccctccacggc 425 Query: 416 gtcgacttcgcctccggcggctccggcatcctcgaccgcaccggccaggacactggagag 475 ||| ||||||||||||||||||||||||||||||||| ||||||| || ||| |||||| Sbjct: 426 gtcaacttcgcctccggcggctccggcatcctcgacctcaccggcaagaacaagggagag 485 Query: 476 gtgttgagcctaaagcagcaaatcaccaacttcgaggctgtgactcttcctgacctgcgg 535 || ||||||||||||||||| ||||||||||| ||||| ||||| || |||||||||||| Sbjct: 486 gtcttgagcctaaagcagcagatcaccaactttgaggcagtgacactccctgacctgcgg 545 Query: 536 gctcagctgcagggagcaacgacagccacca---------ggcacaagatgaagggccaa 586 || || |||||||||||||| |||||||||| | ||||||||||||||||| Sbjct: 546 gcccacctgcagggagcaaccacagccaccaccaccaccggacacaagatgaagggccag 605 Query: 587 gatttctttggccggtgctacttgcccaagagcctatttgtcattgggacaggtggcaat 646 |||||||||| || ||| ||| ||||||||||||| ||| |||||||||||||||||||| Sbjct: 606 gatttctttgaccagtgttacctgcccaagagcctgtttatcattgggacaggtggcaat 665 Query: 647 gactacttgctcaactacttcaac 670 |||||||||||||||||||||||| Sbjct: 666 gactacttgctcaactacttcaac 689 Score = 129 bits (65), Expect = 3e-26 Identities = 137/161 (85%) Strand = Plus / Plus Query: 1074 agaagggcgggcccgtttgcagggacaggaccaagtacgtgtttttcgacgggctccacc 1133 ||||||| ||| || | ||||| |||||||||||||||| || ||||| |||||||||| Sbjct: 1093 agaaggggggggccatctgcagtgacaggaccaagtacgccttcttcgatgggctccacc 1152 Query: 1134 cgacggacgtggtgaacgccaggatcgcgcgcaaggggtacggctcgaagtcgcctgaag 1193 |||| ||||||||||| |||||| | || ||||||| ||||||||| || ||||| || Sbjct: 1153 cgacagacgtggtgaatgccaggctggcacgcaaggcgtacggctccaactcgccggaca 1212 Query: 1194 aagtctaccccatcaatgtgaagaagttggctatgttgtag 1234 |||||||||| |||||||| ||||||||||| ||| ||||| Sbjct: 1213 aagtctaccctatcaatgttaagaagttggcaatgctgtag 1253 Score = 95.6 bits (48), Expect = 5e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 699 cccccttgtcagagttcacaaggtcgctcaccaccgagctctcaggccatctccagaggc 758 |||||||||||||||||||||| || ||| |||| |||||||| ||| || ||||| Sbjct: 712 cccccttgtcagagttcacaagctcactcctcaccaagctctcaaaccacctgcagagat 771 Query: 759 tatatgctctgggtgcaaggaagtttgtgatcttctccatccagcccataggatgcaccc 818 | |||| ||| || ||||||||||||||| | ||||||||||| ||| | || ||||||| Sbjct: 772 tgtatgatctaggggcaaggaagtttgtgctattctccatccaacccctgggttgcaccc 831 Query: 819 ccgtggtgagggcgttcctcaacg 842 | ||||||||| | |||||||||| Sbjct: 832 ctgtggtgaggaccttcctcaacg 855 >dbj|AK063332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-A03, full insert sequence Length = 1349 Score = 472 bits (238), Expect = e-129 Identities = 437/504 (86%), Gaps = 12/504 (2%) Strand = Plus / Plus Query: 179 gtgttcgtgttcgggagctcgctggtggacaacggcaacaacaacttcctcaccaactcc 238 ||||||||||||||||||||| ||||||||||||||||||||||| ||| | | |||| Sbjct: 186 gtgttcgtgttcgggagctcgttggtggacaacggcaacaacaaccacctgaacggctcc 245 Query: 239 agcg---tgcgcgccgactacctgccctacggcgtcgacttcccgctcggcccgtccggc 295 ||| |||||||||||||| |||||||||||||||||||||||| ||| | ||||| Sbjct: 246 ggcgccgtgcgcgccgactacgcgccctacggcgtcgacttcccgctgggcgccaccggc 305 Query: 296 cgcttctccaacggccgcaacatcatcgacgcgctaggcgagctgctgcgcctccccggc 355 ||||||||||||||||||||| |||||||||| || || ||||| || |||||||||| | Sbjct: 306 cgcttctccaacggccgcaacgtcatcgacgccctcggggagctcctccgcctccccgcc 365 Query: 356 ggcggactcgtcccgcccttcgctgacccggctaccaggggccgcgccgcgctgcacggc 415 | ||| ||| ||||||| ||||| ||||| || ||| | ||||||||||| || |||||| Sbjct: 366 gccggcctcctcccgcctttcgccgaccccgccacccgcggccgcgccgccctccacggc 425 Query: 416 gtcgacttcgcctccggcggctccggcatcctcgaccgcaccggccaggacactggagag 475 ||| ||||||||||||||||||||||||||||||||| ||||||| || ||| |||||| Sbjct: 426 gtcaacttcgcctccggcggctccggcatcctcgacctcaccggcaagaacaagggagag 485 Query: 476 gtgttgagcctaaagcagcaaatcaccaacttcgaggctgtgactcttcctgacctgcgg 535 || ||||||||||||||||| ||||||||||| ||||| ||||| || |||||||||||| Sbjct: 486 gtcttgagcctaaagcagcagatcaccaactttgaggcagtgacactccctgacctgcgg 545 Query: 536 gctcagctgcagggagcaacgacagccacca---------ggcacaagatgaagggccaa 586 || || |||||||||||||| |||||||||| | ||||||||||||||||| Sbjct: 546 gcccacctgcagggagcaaccacagccaccaccaccaccggacacaagatgaagggccag 605 Query: 587 gatttctttggccggtgctacttgcccaagagcctatttgtcattgggacaggtggcaat 646 |||||||||| || ||| ||| ||||||||||||| ||| |||||||||||||||||||| Sbjct: 606 gatttctttgaccagtgttacctgcccaagagcctgtttatcattgggacaggtggcaat 665 Query: 647 gactacttgctcaactacttcaac 670 |||||||||||||||||||||||| Sbjct: 666 gactacttgctcaactacttcaac 689 Score = 129 bits (65), Expect = 3e-26 Identities = 137/161 (85%) Strand = Plus / Plus Query: 1074 agaagggcgggcccgtttgcagggacaggaccaagtacgtgtttttcgacgggctccacc 1133 ||||||| ||| || | ||||| |||||||||||||||| || ||||| |||||||||| Sbjct: 1093 agaaggggggggccatctgcagtgacaggaccaagtacgccttcttcgatgggctccacc 1152 Query: 1134 cgacggacgtggtgaacgccaggatcgcgcgcaaggggtacggctcgaagtcgcctgaag 1193 |||| ||||||||||| |||||| | || ||||||| ||||||||| || ||||| || Sbjct: 1153 cgacagacgtggtgaatgccaggctggcacgcaaggcgtacggctccaactcgccggaca 1212 Query: 1194 aagtctaccccatcaatgtgaagaagttggctatgttgtag 1234 |||||||||| |||||||| ||||||||||| ||| ||||| Sbjct: 1213 aagtctaccctatcaatgttaagaagttggcaatgctgtag 1253 Score = 95.6 bits (48), Expect = 5e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 699 cccccttgtcagagttcacaaggtcgctcaccaccgagctctcaggccatctccagaggc 758 |||||||||||||||||||||| || ||| |||| |||||||| ||| || ||||| Sbjct: 712 cccccttgtcagagttcacaagctcactcctcaccaagctctcaaaccacctgcagagat 771 Query: 759 tatatgctctgggtgcaaggaagtttgtgatcttctccatccagcccataggatgcaccc 818 | |||| ||| || ||||||||||||||| | ||||||||||| ||| | || ||||||| Sbjct: 772 tgtatgatctaggggcaaggaagtttgtgctattctccatccaacccctgggttgcaccc 831 Query: 819 ccgtggtgagggcgttcctcaacg 842 | ||||||||| | |||||||||| Sbjct: 832 ctgtggtgaggaccttcctcaacg 855 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 276 bits (139), Expect = 2e-70 Identities = 249/285 (87%), Gaps = 3/285 (1%) Strand = Plus / Plus Query: 179 gtgttcgtgttcgggagctcgctggtggacaacggcaacaacaacttcctcaccaactcc 238 ||||||||||||||||||||||||||||||||||||||||||||| ||| | | |||| Sbjct: 21100139 gtgttcgtgttcgggagctcgctggtggacaacggcaacaacaaccacctgaacggctcc 21100198 Query: 239 agcg---tgcgcgccgactacctgccctacggcgtcgacttcccgctcggcccgtccggc 295 ||| |||||||||||||| |||||||||||||||||||||||| ||| | ||||| Sbjct: 21100199 ggcgccgtgcgcgccgactacgcgccctacggcgtcgacttcccgctgggcgccaccggc 21100258 Query: 296 cgcttctccaacggccgcaacatcatcgacgcgctaggcgagctgctgcgcctccccggc 355 ||||||||||||||||||||| |||||||||| || || ||||| || |||||||||| | Sbjct: 21100259 cgcttctccaacggccgcaacgtcatcgacgccctcggggagctcctccgcctccccgcc 21100318 Query: 356 ggcggactcgtcccgcccttcgctgacccggctaccaggggccgcgccgcgctgcacggc 415 | ||| ||| ||||||| ||||| ||||| || ||| | ||||||||||| || |||||| Sbjct: 21100319 gccggcctcctcccgcctttcgccgaccccgccacccgcggccgcgccgccctccacggc 21100378 Query: 416 gtcgacttcgcctccggcggctccggcatcctcgaccgcaccggc 460 ||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 21100379 gtcaacttcgcctccggcggctccggcatcctcgacctcaccggc 21100423 Score = 218 bits (110), Expect = 5e-53 Identities = 184/210 (87%), Gaps = 9/210 (4%) Strand = Plus / Plus Query: 470 ggagaggtgttgagcctaaagcagcaaatcaccaacttcgaggctgtgactcttcctgac 529 |||||||| ||||||||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 21101310 ggagaggtcttgagcctaaagcagcagatcaccaactttgaggcagtgacactccctgac 21101369 Query: 530 ctgcgggctcagctgcagggagcaacgacagccacca---------ggcacaagatgaag 580 |||||||| || |||||||||||||| |||||||||| | |||||||||||| Sbjct: 21101370 ctgcgggcccacctgcagggagcaaccacagccaccaccaccaccggacacaagatgaag 21101429 Query: 581 ggccaagatttctttggccggtgctacttgcccaagagcctatttgtcattgggacaggt 640 ||||| |||||||||| || ||| ||| ||||||||||||| ||| |||||||||||||| Sbjct: 21101430 ggccaggatttctttgaccagtgttacctgcccaagagcctgtttatcattgggacaggt 21101489 Query: 641 ggcaatgactacttgctcaactacttcaac 670 |||||||||||||||||||||||||||||| Sbjct: 21101490 ggcaatgactacttgctcaactacttcaac 21101519 Score = 129 bits (65), Expect = 3e-26 Identities = 137/161 (85%) Strand = Plus / Plus Query: 1074 agaagggcgggcccgtttgcagggacaggaccaagtacgtgtttttcgacgggctccacc 1133 ||||||| ||| || | ||||| |||||||||||||||| || ||||| |||||||||| Sbjct: 21102917 agaaggggggggccatctgcagtgacaggaccaagtacgccttcttcgatgggctccacc 21102976 Query: 1134 cgacggacgtggtgaacgccaggatcgcgcgcaaggggtacggctcgaagtcgcctgaag 1193 |||| ||||||||||| |||||| | || ||||||| ||||||||| || ||||| || Sbjct: 21102977 cgacagacgtggtgaatgccaggctggcacgcaaggcgtacggctccaactcgccggaca 21103036 Query: 1194 aagtctaccccatcaatgtgaagaagttggctatgttgtag 1234 |||||||||| |||||||| ||||||||||| ||| ||||| Sbjct: 21103037 aagtctaccctatcaatgttaagaagttggcaatgctgtag 21103077 >dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E12 Length = 139750 Score = 276 bits (139), Expect = 2e-70 Identities = 249/285 (87%), Gaps = 3/285 (1%) Strand = Plus / Plus Query: 179 gtgttcgtgttcgggagctcgctggtggacaacggcaacaacaacttcctcaccaactcc 238 ||||||||||||||||||||||||||||||||||||||||||||| ||| | | |||| Sbjct: 97140 gtgttcgtgttcgggagctcgctggtggacaacggcaacaacaaccacctgaacggctcc 97199 Query: 239 agcg---tgcgcgccgactacctgccctacggcgtcgacttcccgctcggcccgtccggc 295 ||| |||||||||||||| |||||||||||||||||||||||| ||| | ||||| Sbjct: 97200 ggcgccgtgcgcgccgactacgcgccctacggcgtcgacttcccgctgggcgccaccggc 97259 Query: 296 cgcttctccaacggccgcaacatcatcgacgcgctaggcgagctgctgcgcctccccggc 355 ||||||||||||||||||||| |||||||||| || || ||||| || |||||||||| | Sbjct: 97260 cgcttctccaacggccgcaacgtcatcgacgccctcggggagctcctccgcctccccgcc 97319 Query: 356 ggcggactcgtcccgcccttcgctgacccggctaccaggggccgcgccgcgctgcacggc 415 | ||| ||| ||||||| ||||| ||||| || ||| | ||||||||||| || |||||| Sbjct: 97320 gccggcctcctcccgcctttcgccgaccccgccacccgcggccgcgccgccctccacggc 97379 Query: 416 gtcgacttcgcctccggcggctccggcatcctcgaccgcaccggc 460 ||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 97380 gtcaacttcgcctccggcggctccggcatcctcgacctcaccggc 97424 Score = 218 bits (110), Expect = 5e-53 Identities = 184/210 (87%), Gaps = 9/210 (4%) Strand = Plus / Plus Query: 470 ggagaggtgttgagcctaaagcagcaaatcaccaacttcgaggctgtgactcttcctgac 529 |||||||| ||||||||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 98311 ggagaggtcttgagcctaaagcagcagatcaccaactttgaggcagtgacactccctgac 98370 Query: 530 ctgcgggctcagctgcagggagcaacgacagccacca---------ggcacaagatgaag 580 |||||||| || |||||||||||||| |||||||||| | |||||||||||| Sbjct: 98371 ctgcgggcccacctgcagggagcaaccacagccaccaccaccaccggacacaagatgaag 98430 Query: 581 ggccaagatttctttggccggtgctacttgcccaagagcctatttgtcattgggacaggt 640 ||||| |||||||||| || ||| ||| ||||||||||||| ||| |||||||||||||| Sbjct: 98431 ggccaggatttctttgaccagtgttacctgcccaagagcctgtttatcattgggacaggt 98490 Query: 641 ggcaatgactacttgctcaactacttcaac 670 |||||||||||||||||||||||||||||| Sbjct: 98491 ggcaatgactacttgctcaactacttcaac 98520 Score = 129 bits (65), Expect = 3e-26 Identities = 137/161 (85%) Strand = Plus / Plus Query: 1074 agaagggcgggcccgtttgcagggacaggaccaagtacgtgtttttcgacgggctccacc 1133 ||||||| ||| || | ||||| |||||||||||||||| || ||||| |||||||||| Sbjct: 99918 agaaggggggggccatctgcagtgacaggaccaagtacgccttcttcgatgggctccacc 99977 Query: 1134 cgacggacgtggtgaacgccaggatcgcgcgcaaggggtacggctcgaagtcgcctgaag 1193 |||| ||||||||||| |||||| | || ||||||| ||||||||| || ||||| || Sbjct: 99978 cgacagacgtggtgaatgccaggctggcacgcaaggcgtacggctccaactcgccggaca 100037 Query: 1194 aagtctaccccatcaatgtgaagaagttggctatgttgtag 1234 |||||||||| |||||||| ||||||||||| ||| ||||| Sbjct: 100038 aagtctaccctatcaatgttaagaagttggcaatgctgtag 100078 >dbj|AP003762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456F09 Length = 141336 Score = 174 bits (88), Expect = 6e-40 Identities = 156/180 (86%), Gaps = 9/180 (5%) Strand = Plus / Plus Query: 500 accaacttcgaggctgtgactcttcctgacctgcgggctcagctgcagggagcaacgaca 559 |||||||| ||||| ||||| || |||||||||||||| || |||||||||||||| ||| Sbjct: 1 accaactttgaggcagtgacactccctgacctgcgggcccacctgcagggagcaaccaca 60 Query: 560 gccacca---------ggcacaagatgaagggccaagatttctttggccggtgctacttg 610 ||||||| | ||||||||||||||||| |||||||||| || ||| ||| || Sbjct: 61 gccaccaccaccaccggacacaagatgaagggccaggatttctttgaccagtgttacctg 120 Query: 611 cccaagagcctatttgtcattgggacaggtggcaatgactacttgctcaactacttcaac 670 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cccaagagcctgtttatcattgggacaggtggcaatgactacttgctcaactacttcaac 180 Score = 129 bits (65), Expect = 3e-26 Identities = 137/161 (85%) Strand = Plus / Plus Query: 1074 agaagggcgggcccgtttgcagggacaggaccaagtacgtgtttttcgacgggctccacc 1133 ||||||| ||| || | ||||| |||||||||||||||| || ||||| |||||||||| Sbjct: 1578 agaaggggggggccatctgcagtgacaggaccaagtacgccttcttcgatgggctccacc 1637 Query: 1134 cgacggacgtggtgaacgccaggatcgcgcgcaaggggtacggctcgaagtcgcctgaag 1193 |||| ||||||||||| |||||| | || ||||||| ||||||||| || ||||| || Sbjct: 1638 cgacagacgtggtgaatgccaggctggcacgcaaggcgtacggctccaactcgccggaca 1697 Query: 1194 aagtctaccccatcaatgtgaagaagttggctatgttgtag 1234 |||||||||| |||||||| ||||||||||| ||| ||||| Sbjct: 1698 aagtctaccctatcaatgttaagaagttggcaatgctgtag 1738