BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem207c18 (1511 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001049085.1| Oryza sativa (japonica cultivar-group) Os01g... 226 2e-55 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 226 2e-55 dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic D... 226 2e-55 dbj|AK119763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 2e-55 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 80 3e-11 >ref|NM_001049085.1| Oryza sativa (japonica cultivar-group) Os01g0241000 (Os01g0241000) mRNA, complete cds Length = 1545 Score = 226 bits (114), Expect = 2e-55 Identities = 182/204 (89%), Gaps = 3/204 (1%) Strand = Plus / Plus Query: 862 ccgcggcgcgagctccgatcgttcagcgccaaccagcagccggccatcgtccggtacaag 921 |||||||| ||||| || ||||||||||| |||||||||||| |||||||| || || Sbjct: 803 ccgcggcgagagctgcggtcgttcagcgcgaaccagcagccgc---tcgtccggcaccag 859 Query: 922 agcgcattccaggacaagaaatggaagagctcgagcgacctggagtcgatcgaggtgcag 981 ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 860 agcctgttccacgacaagaagtggaagagctcgagcgacctggagtcgatcgaggtgcag 919 Query: 982 gggttcaaggacctgggcttcgtgttcgaccagaaggagctcagggagagcctggcggac 1041 ||||||| ||||||||||||||||||||||||| |||||||| | |||||||| || ||| Sbjct: 920 gggttcagggacctgggcttcgtgttcgaccaggaggagctccgcgagagcctcgccgac 979 Query: 1042 gtcctcccgggcctccgcggcaag 1065 |||||||| ||||||||||||||| Sbjct: 980 gtcctccctggcctccgcggcaag 1003 Score = 167 bits (84), Expect = 2e-37 Identities = 96/100 (96%) Strand = Plus / Plus Query: 1225 aggctgcagcaggcggacgcgaggtccgcggcggagatgaaggaccagattcggatgtgg 1284 |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 1169 aggctgcagcaggcggacgcgaggtcggcggcggagatgaaggaccagcttcggatgtgg 1228 Query: 1285 gcgcaggccgttgcgtgcaatgtccgacaagagtgttaaa 1324 ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 1229 gcgcaggccgtggcgtgcaacgtccgacaagagtgttaaa 1268 Score = 139 bits (70), Expect = 4e-29 Identities = 102/112 (91%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 739 acgccgagtatgtccaggctcaggcactcgtacagcacgctggagagacattgccgctcg 798 |||||| | |||||||||||||||||| | ||||||||||||||||||| ||||||||| Sbjct: 668 acgccgggcatgtccaggctcaggcacgcccacagcacgctggagagacactgccgctcg 727 Query: 799 cacacgc---ccaccaaggctgaccggacgccgaggacgtcgggcggcggcg 847 ||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 728 cacacgcccaccaccaaggctgaccggacgccgagaacgtcgggcggcggcg 779 Score = 95.6 bits (48), Expect = 5e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 556 gacgtggaggacgatgacctgaactggagctcgatttacgagggcgtcctgcgcaccagg 615 |||| ||||||||| |||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 482 gacgcggaggacgacgacctgaactggagctcgatatacgagggcgtgctccgcaccagg 541 Query: 616 atcgccga 623 |||||||| Sbjct: 542 atcgccga 549 Score = 89.7 bits (45), Expect = 3e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 411 ggggacgtccaggctctacgcgtccgggtgcaggaggctcctccggacgccgtcgctccc 470 ||||||||| ||||| | |||||||| | | |||||||||||||||||||||||||||| Sbjct: 328 ggggacgtcgaggctgttcgcgtccgcggggcggaggctcctccggacgccgtcgctccc 387 Query: 471 gtcgcctcgtgtcgggatgga 491 |||||| || ||||||||||| Sbjct: 388 gtcgccgcgcgtcgggatgga 408 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 226 bits (114), Expect = 2e-55 Identities = 182/204 (89%), Gaps = 3/204 (1%) Strand = Plus / Plus Query: 862 ccgcggcgcgagctccgatcgttcagcgccaaccagcagccggccatcgtccggtacaag 921 |||||||| ||||| || ||||||||||| |||||||||||| |||||||| || || Sbjct: 7804046 ccgcggcgagagctgcggtcgttcagcgcgaaccagcagccgc---tcgtccggcaccag 7804102 Query: 922 agcgcattccaggacaagaaatggaagagctcgagcgacctggagtcgatcgaggtgcag 981 ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 7804103 agcctgttccacgacaagaagtggaagagctcgagcgacctggagtcgatcgaggtgcag 7804162 Query: 982 gggttcaaggacctgggcttcgtgttcgaccagaaggagctcagggagagcctggcggac 1041 ||||||| ||||||||||||||||||||||||| |||||||| | |||||||| || ||| Sbjct: 7804163 gggttcagggacctgggcttcgtgttcgaccaggaggagctccgcgagagcctcgccgac 7804222 Query: 1042 gtcctcccgggcctccgcggcaag 1065 |||||||| ||||||||||||||| Sbjct: 7804223 gtcctccctggcctccgcggcaag 7804246 Score = 167 bits (84), Expect = 2e-37 Identities = 96/100 (96%) Strand = Plus / Plus Query: 1225 aggctgcagcaggcggacgcgaggtccgcggcggagatgaaggaccagattcggatgtgg 1284 |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 7804412 aggctgcagcaggcggacgcgaggtcggcggcggagatgaaggaccagcttcggatgtgg 7804471 Query: 1285 gcgcaggccgttgcgtgcaatgtccgacaagagtgttaaa 1324 ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 7804472 gcgcaggccgtggcgtgcaacgtccgacaagagtgttaaa 7804511 Score = 97.6 bits (49), Expect = 1e-16 Identities = 67/73 (91%) Strand = Plus / Plus Query: 739 acgccgagtatgtccaggctcaggcactcgtacagcacgctggagagacattgccgctcg 798 |||||| | |||||||||||||||||| | ||||||||||||||||||| ||||||||| Sbjct: 7803833 acgccgggcatgtccaggctcaggcacgcccacagcacgctggagagacactgccgctcg 7803892 Query: 799 cacacgcccacca 811 ||||||||||||| Sbjct: 7803893 cacacgcccacca 7803905 Score = 95.6 bits (48), Expect = 5e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 556 gacgtggaggacgatgacctgaactggagctcgatttacgagggcgtcctgcgcaccagg 615 |||| ||||||||| |||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 7803647 gacgcggaggacgacgacctgaactggagctcgatatacgagggcgtgctccgcaccagg 7803706 Query: 616 atcgccga 623 |||||||| Sbjct: 7803707 atcgccga 7803714 Score = 89.7 bits (45), Expect = 3e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 411 ggggacgtccaggctctacgcgtccgggtgcaggaggctcctccggacgccgtcgctccc 470 ||||||||| ||||| | |||||||| | | |||||||||||||||||||||||||||| Sbjct: 7803493 ggggacgtcgaggctgttcgcgtccgcggggcggaggctcctccggacgccgtcgctccc 7803552 Query: 471 gtcgcctcgtgtcgggatgga 491 |||||| || ||||||||||| Sbjct: 7803553 gtcgccgcgcgtcgggatgga 7803573 >dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0010K01 Length = 144404 Score = 226 bits (114), Expect = 2e-55 Identities = 182/204 (89%), Gaps = 3/204 (1%) Strand = Plus / Plus Query: 862 ccgcggcgcgagctccgatcgttcagcgccaaccagcagccggccatcgtccggtacaag 921 |||||||| ||||| || ||||||||||| |||||||||||| |||||||| || || Sbjct: 106627 ccgcggcgagagctgcggtcgttcagcgcgaaccagcagccgc---tcgtccggcaccag 106683 Query: 922 agcgcattccaggacaagaaatggaagagctcgagcgacctggagtcgatcgaggtgcag 981 ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106684 agcctgttccacgacaagaagtggaagagctcgagcgacctggagtcgatcgaggtgcag 106743 Query: 982 gggttcaaggacctgggcttcgtgttcgaccagaaggagctcagggagagcctggcggac 1041 ||||||| ||||||||||||||||||||||||| |||||||| | |||||||| || ||| Sbjct: 106744 gggttcagggacctgggcttcgtgttcgaccaggaggagctccgcgagagcctcgccgac 106803 Query: 1042 gtcctcccgggcctccgcggcaag 1065 |||||||| ||||||||||||||| Sbjct: 106804 gtcctccctggcctccgcggcaag 106827 Score = 167 bits (84), Expect = 2e-37 Identities = 96/100 (96%) Strand = Plus / Plus Query: 1225 aggctgcagcaggcggacgcgaggtccgcggcggagatgaaggaccagattcggatgtgg 1284 |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 106993 aggctgcagcaggcggacgcgaggtcggcggcggagatgaaggaccagcttcggatgtgg 107052 Query: 1285 gcgcaggccgttgcgtgcaatgtccgacaagagtgttaaa 1324 ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 107053 gcgcaggccgtggcgtgcaacgtccgacaagagtgttaaa 107092 Score = 97.6 bits (49), Expect = 1e-16 Identities = 67/73 (91%) Strand = Plus / Plus Query: 739 acgccgagtatgtccaggctcaggcactcgtacagcacgctggagagacattgccgctcg 798 |||||| | |||||||||||||||||| | ||||||||||||||||||| ||||||||| Sbjct: 106414 acgccgggcatgtccaggctcaggcacgcccacagcacgctggagagacactgccgctcg 106473 Query: 799 cacacgcccacca 811 ||||||||||||| Sbjct: 106474 cacacgcccacca 106486 Score = 95.6 bits (48), Expect = 5e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 556 gacgtggaggacgatgacctgaactggagctcgatttacgagggcgtcctgcgcaccagg 615 |||| ||||||||| |||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 106228 gacgcggaggacgacgacctgaactggagctcgatatacgagggcgtgctccgcaccagg 106287 Query: 616 atcgccga 623 |||||||| Sbjct: 106288 atcgccga 106295 Score = 89.7 bits (45), Expect = 3e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 411 ggggacgtccaggctctacgcgtccgggtgcaggaggctcctccggacgccgtcgctccc 470 ||||||||| ||||| | |||||||| | | |||||||||||||||||||||||||||| Sbjct: 106074 ggggacgtcgaggctgttcgcgtccgcggggcggaggctcctccggacgccgtcgctccc 106133 Query: 471 gtcgcctcgtgtcgggatgga 491 |||||| || ||||||||||| Sbjct: 106134 gtcgccgcgcgtcgggatgga 106154 >dbj|AK119763.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-G09, full insert sequence Length = 1544 Score = 226 bits (114), Expect = 2e-55 Identities = 182/204 (89%), Gaps = 3/204 (1%) Strand = Plus / Plus Query: 862 ccgcggcgcgagctccgatcgttcagcgccaaccagcagccggccatcgtccggtacaag 921 |||||||| ||||| || ||||||||||| |||||||||||| |||||||| || || Sbjct: 803 ccgcggcgagagctgcggtcgttcagcgcgaaccagcagccgc---tcgtccggcaccag 859 Query: 922 agcgcattccaggacaagaaatggaagagctcgagcgacctggagtcgatcgaggtgcag 981 ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 860 agcctgttccacgacaagaagtggaagagctcgagcgacctggagtcgatcgaggtgcag 919 Query: 982 gggttcaaggacctgggcttcgtgttcgaccagaaggagctcagggagagcctggcggac 1041 ||||||| ||||||||||||||||||||||||| |||||||| | |||||||| || ||| Sbjct: 920 gggttcagggacctgggcttcgtgttcgaccaggaggagctccgcgagagcctcgccgac 979 Query: 1042 gtcctcccgggcctccgcggcaag 1065 |||||||| ||||||||||||||| Sbjct: 980 gtcctccctggcctccgcggcaag 1003 Score = 167 bits (84), Expect = 2e-37 Identities = 96/100 (96%) Strand = Plus / Plus Query: 1225 aggctgcagcaggcggacgcgaggtccgcggcggagatgaaggaccagattcggatgtgg 1284 |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 1169 aggctgcagcaggcggacgcgaggtcggcggcggagatgaaggaccagcttcggatgtgg 1228 Query: 1285 gcgcaggccgttgcgtgcaatgtccgacaagagtgttaaa 1324 ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 1229 gcgcaggccgtggcgtgcaacgtccgacaagagtgttaaa 1268 Score = 139 bits (70), Expect = 4e-29 Identities = 102/112 (91%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 739 acgccgagtatgtccaggctcaggcactcgtacagcacgctggagagacattgccgctcg 798 |||||| | |||||||||||||||||| | ||||||||||||||||||| ||||||||| Sbjct: 668 acgccgggcatgtccaggctcaggcacgcccacagcacgctggagagacactgccgctcg 727 Query: 799 cacacgc---ccaccaaggctgaccggacgccgaggacgtcgggcggcggcg 847 ||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 728 cacacgcccaccaccaaggctgaccggacgccgagaacgtcgggcggcggcg 779 Score = 95.6 bits (48), Expect = 5e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 556 gacgtggaggacgatgacctgaactggagctcgatttacgagggcgtcctgcgcaccagg 615 |||| ||||||||| |||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 482 gacgcggaggacgacgacctgaactggagctcgatatacgagggcgtgctccgcaccagg 541 Query: 616 atcgccga 623 |||||||| Sbjct: 542 atcgccga 549 Score = 89.7 bits (45), Expect = 3e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 411 ggggacgtccaggctctacgcgtccgggtgcaggaggctcctccggacgccgtcgctccc 470 ||||||||| ||||| | |||||||| | | |||||||||||||||||||||||||||| Sbjct: 328 ggggacgtcgaggctgttcgcgtccgcggggcggaggctcctccggacgccgtcgctccc 387 Query: 471 gtcgcctcgtgtcgggatgga 491 |||||| || ||||||||||| Sbjct: 388 gtcgccgcgcgtcgggatgga 408 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 79.8 bits (40), Expect = 3e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 739 acgccgagtatgtccaggctcaggcactcgtacagcacgctggagagacattgccgctcg 798 |||||| | ||||||||||||| |||| | ||||||||||||||||||| ||||||||| Sbjct: 19140652 acgccgggcatgtccaggctcaagcacgcccacagcacgctggagagacactgccgctcg 19140593 Query: 799 cacacgcccacc 810 ||| |||||||| Sbjct: 19140592 cacgcgcccacc 19140581 Score = 79.8 bits (40), Expect = 3e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 556 gacgtggaggacgatgacctgaactggagctcgatttacgagggcgtcctgcgcaccagg 615 |||| ||||||||| |||||||||||||||||||| |||||| || | || ||||||||| Sbjct: 19140839 gacgcggaggacgacgacctgaactggagctcgatatacgagagcatgctccgcaccagg 19140780 Query: 616 atcgccga 623 |||||||| Sbjct: 19140779 atcgccga 19140772