BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem207a01 (1854 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001057120.1| Oryza sativa (japonica cultivar-group) Os03g... 280 2e-71 gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 genom... 280 2e-71 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 280 2e-71 dbj|AK101749.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 2e-71 ref|NM_001053199.1| Oryza sativa (japonica cultivar-group) Os02g... 186 2e-43 >ref|NM_001057120.1| Oryza sativa (japonica cultivar-group) Os03g0591300 (Os03g0591300) mRNA, complete cds Length = 1814 Score = 280 bits (141), Expect = 2e-71 Identities = 197/215 (91%), Gaps = 3/215 (1%) Strand = Plus / Plus Query: 1044 cggctttgatcagaactacgccagcaagagcgcctactacggtggc---ggcgacgacgg 1100 |||||| || ||| ||||||||||||||||||||||||| || | | | ||||| ||| Sbjct: 988 cggcttcgagcaggactacgccagcaagagcgcctactatggcgtcgaggacgacggcgg 1047 Query: 1101 cggtgggtgctcgatccggcagaaggaggacaccgacgagatcgacgcgctgatgagctc 1160 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1048 cggcgggtgctcgatccggcagaaggaggacaccgacgagatcgacgcgctgatgagcac 1107 Query: 1161 cgaggacggcgaggaggaggacgacgtgctgagcacgggccgcacgccggggtgccgcgc 1220 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || Sbjct: 1108 ggaggacggcgaggaggaggacgacgtcctgagcacgggccgcacgcctgggtgccgggc 1167 Query: 1221 cgggggctcgccggactccacgtgctcctccggcg 1255 ||||||||||||||||||||||||||| ||||||| Sbjct: 1168 cgggggctcgccggactccacgtgctcgtccggcg 1202 Score = 280 bits (141), Expect = 2e-71 Identities = 168/177 (94%) Strand = Plus / Plus Query: 1307 ccggcgacggcgagaggaagaaggagcggatgaagaagatgatgcggacgctcaagggga 1366 |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1242 ccggcggcggcgagaggaagaaggagcggatgaagaagatgatgcggactctcaagggga 1301 Query: 1367 tcatccccggcggcgatcggatggacacgcccgccgtcctcgacgaggccgtcaggtacc 1426 |||||||||||||||| |||||||||| |||||||||||||||||||||||| | |||| Sbjct: 1302 tcatccccggcggcgacaggatggacacccccgccgtcctcgacgaggccgtccgctacc 1361 Query: 1427 tcaagtcgctcaaggtggaggtcaagaagctcggcgtgcgcggatcaagcagctagc 1483 |||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 1362 tcaagtcgctcaaggtggaggtcaagaagctcggcgtgcgtggctcaagcagctagc 1418 Score = 242 bits (122), Expect = 4e-60 Identities = 131/134 (97%) Strand = Plus / Plus Query: 875 ggcagcacgacttcccggcgccgctcaccgggctcgagttccagccgtcggacacctgcc 934 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 804 ggcagcacgacttcccggcgccgctcaccggtgtcgagttccagccgtcggacacctgcc 863 Query: 935 ccaagaactacgtcatcttcgaccagacctacgaccggagccgggtcatgttccaccctt 994 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 864 ccaagaactacgtcatcttcgaccagacctacgaccggagccgggtcatgttccaccctt 923 Query: 995 ccctggccaacaac 1008 | |||||||||||| Sbjct: 924 cgctggccaacaac 937 Score = 216 bits (109), Expect = 2e-52 Identities = 133/141 (94%) Strand = Plus / Plus Query: 338 gaggatatgtgcgttgggttcaaccggaggagccttgaagccgtcgttatgacaagtggc 397 ||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 268 gaggacatgtgcgttgggttcaacgggaggagccttgacaccgtcgttatgacaagtggc 327 Query: 398 gccgtcgcgtactactacagattgatgcaagtttgccaggccgaatacttccgccagcta 457 |||||||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 328 gccgtcgcatattactacagattgatgcaagtgtgccaggccgaatacttccgccagctg 387 Query: 458 ctcaagcccgtgacgtagatt 478 ||||||||||||||||||||| Sbjct: 388 ctcaagcccgtgacgtagatt 408 Score = 117 bits (59), Expect = 2e-22 Identities = 90/99 (90%), Gaps = 6/99 (6%) Strand = Plus / Plus Query: 699 cgatgcagggagacccagggtacgggtacggtggctacggctacagctacgggtatggct 758 |||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 624 cgatgcagggcgacccagggtacgggtacggtggctacggctacggctacggctatggct 683 Query: 759 acgggggcggcgctagcggctacgacatggccggctacg 797 |||| |||||| ||||||||||||||||||||||| Sbjct: 684 acgg---cggcgc---cggctacgacatggccggctacg 716 >gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 genomic sequence, complete sequence Length = 163108 Score = 280 bits (141), Expect = 2e-71 Identities = 197/215 (91%), Gaps = 3/215 (1%) Strand = Plus / Plus Query: 1044 cggctttgatcagaactacgccagcaagagcgcctactacggtggc---ggcgacgacgg 1100 |||||| || ||| ||||||||||||||||||||||||| || | | | ||||| ||| Sbjct: 109078 cggcttcgagcaggactacgccagcaagagcgcctactatggcgtcgaggacgacggcgg 109137 Query: 1101 cggtgggtgctcgatccggcagaaggaggacaccgacgagatcgacgcgctgatgagctc 1160 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 109138 cggcgggtgctcgatccggcagaaggaggacaccgacgagatcgacgcgctgatgagcac 109197 Query: 1161 cgaggacggcgaggaggaggacgacgtgctgagcacgggccgcacgccggggtgccgcgc 1220 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || Sbjct: 109198 ggaggacggcgaggaggaggacgacgtcctgagcacgggccgcacgcctgggtgccgggc 109257 Query: 1221 cgggggctcgccggactccacgtgctcctccggcg 1255 ||||||||||||||||||||||||||| ||||||| Sbjct: 109258 cgggggctcgccggactccacgtgctcgtccggcg 109292 Score = 280 bits (141), Expect = 2e-71 Identities = 168/177 (94%) Strand = Plus / Plus Query: 1307 ccggcgacggcgagaggaagaaggagcggatgaagaagatgatgcggacgctcaagggga 1366 |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 109332 ccggcggcggcgagaggaagaaggagcggatgaagaagatgatgcggactctcaagggga 109391 Query: 1367 tcatccccggcggcgatcggatggacacgcccgccgtcctcgacgaggccgtcaggtacc 1426 |||||||||||||||| |||||||||| |||||||||||||||||||||||| | |||| Sbjct: 109392 tcatccccggcggcgacaggatggacacccccgccgtcctcgacgaggccgtccgctacc 109451 Query: 1427 tcaagtcgctcaaggtggaggtcaagaagctcggcgtgcgcggatcaagcagctagc 1483 |||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 109452 tcaagtcgctcaaggtggaggtcaagaagctcggcgtgcgtggctcaagcagctagc 109508 Score = 242 bits (122), Expect = 4e-60 Identities = 131/134 (97%) Strand = Plus / Plus Query: 875 ggcagcacgacttcccggcgccgctcaccgggctcgagttccagccgtcggacacctgcc 934 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 108894 ggcagcacgacttcccggcgccgctcaccggtgtcgagttccagccgtcggacacctgcc 108953 Query: 935 ccaagaactacgtcatcttcgaccagacctacgaccggagccgggtcatgttccaccctt 994 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108954 ccaagaactacgtcatcttcgaccagacctacgaccggagccgggtcatgttccaccctt 109013 Query: 995 ccctggccaacaac 1008 | |||||||||||| Sbjct: 109014 cgctggccaacaac 109027 Score = 143 bits (72), Expect = 3e-30 Identities = 93/100 (93%) Strand = Plus / Plus Query: 338 gaggatatgtgcgttgggttcaaccggaggagccttgaagccgtcgttatgacaagtggc 397 ||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 106935 gaggacatgtgcgttgggttcaacgggaggagccttgacaccgtcgttatgacaagtggc 106994 Query: 398 gccgtcgcgtactactacagattgatgcaagtttgccagg 437 |||||||| || |||||||||||||||||||| ||||||| Sbjct: 106995 gccgtcgcatattactacagattgatgcaagtgtgccagg 107034 Score = 117 bits (59), Expect = 2e-22 Identities = 90/99 (90%), Gaps = 6/99 (6%) Strand = Plus / Plus Query: 699 cgatgcagggagacccagggtacgggtacggtggctacggctacagctacgggtatggct 758 |||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 108714 cgatgcagggcgacccagggtacgggtacggtggctacggctacggctacggctatggct 108773 Query: 759 acgggggcggcgctagcggctacgacatggccggctacg 797 |||| |||||| ||||||||||||||||||||||| Sbjct: 108774 acgg---cggcgc---cggctacgacatggccggctacg 108806 Score = 81.8 bits (41), Expect = 9e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 434 caggccgaatacttccgccagctactcaagcccgtgacgtagatt 478 ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 108454 caggccgaatacttccgccagctgctcaagcccgtgacgtagatt 108498 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 280 bits (141), Expect = 2e-71 Identities = 197/215 (91%), Gaps = 3/215 (1%) Strand = Plus / Plus Query: 1044 cggctttgatcagaactacgccagcaagagcgcctactacggtggc---ggcgacgacgg 1100 |||||| || ||| ||||||||||||||||||||||||| || | | | ||||| ||| Sbjct: 21713862 cggcttcgagcaggactacgccagcaagagcgcctactatggcgtcgaggacgacggcgg 21713921 Query: 1101 cggtgggtgctcgatccggcagaaggaggacaccgacgagatcgacgcgctgatgagctc 1160 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 21713922 cggcgggtgctcgatccggcagaaggaggacaccgacgagatcgacgcgctgatgagcac 21713981 Query: 1161 cgaggacggcgaggaggaggacgacgtgctgagcacgggccgcacgccggggtgccgcgc 1220 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || Sbjct: 21713982 ggaggacggcgaggaggaggacgacgtcctgagcacgggccgcacgcctgggtgccgggc 21714041 Query: 1221 cgggggctcgccggactccacgtgctcctccggcg 1255 ||||||||||||||||||||||||||| ||||||| Sbjct: 21714042 cgggggctcgccggactccacgtgctcgtccggcg 21714076 Score = 280 bits (141), Expect = 2e-71 Identities = 168/177 (94%) Strand = Plus / Plus Query: 1307 ccggcgacggcgagaggaagaaggagcggatgaagaagatgatgcggacgctcaagggga 1366 |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 21714116 ccggcggcggcgagaggaagaaggagcggatgaagaagatgatgcggactctcaagggga 21714175 Query: 1367 tcatccccggcggcgatcggatggacacgcccgccgtcctcgacgaggccgtcaggtacc 1426 |||||||||||||||| |||||||||| |||||||||||||||||||||||| | |||| Sbjct: 21714176 tcatccccggcggcgacaggatggacacccccgccgtcctcgacgaggccgtccgctacc 21714235 Query: 1427 tcaagtcgctcaaggtggaggtcaagaagctcggcgtgcgcggatcaagcagctagc 1483 |||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 21714236 tcaagtcgctcaaggtggaggtcaagaagctcggcgtgcgtggctcaagcagctagc 21714292 Score = 242 bits (122), Expect = 4e-60 Identities = 131/134 (97%) Strand = Plus / Plus Query: 875 ggcagcacgacttcccggcgccgctcaccgggctcgagttccagccgtcggacacctgcc 934 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 21713678 ggcagcacgacttcccggcgccgctcaccggtgtcgagttccagccgtcggacacctgcc 21713737 Query: 935 ccaagaactacgtcatcttcgaccagacctacgaccggagccgggtcatgttccaccctt 994 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21713738 ccaagaactacgtcatcttcgaccagacctacgaccggagccgggtcatgttccaccctt 21713797 Query: 995 ccctggccaacaac 1008 | |||||||||||| Sbjct: 21713798 cgctggccaacaac 21713811 Score = 143 bits (72), Expect = 3e-30 Identities = 93/100 (93%) Strand = Plus / Plus Query: 338 gaggatatgtgcgttgggttcaaccggaggagccttgaagccgtcgttatgacaagtggc 397 ||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 21711719 gaggacatgtgcgttgggttcaacgggaggagccttgacaccgtcgttatgacaagtggc 21711778 Query: 398 gccgtcgcgtactactacagattgatgcaagtttgccagg 437 |||||||| || |||||||||||||||||||| ||||||| Sbjct: 21711779 gccgtcgcatattactacagattgatgcaagtgtgccagg 21711818 Score = 117 bits (59), Expect = 2e-22 Identities = 90/99 (90%), Gaps = 6/99 (6%) Strand = Plus / Plus Query: 699 cgatgcagggagacccagggtacgggtacggtggctacggctacagctacgggtatggct 758 |||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 21713498 cgatgcagggcgacccagggtacgggtacggtggctacggctacggctacggctatggct 21713557 Query: 759 acgggggcggcgctagcggctacgacatggccggctacg 797 |||| |||||| ||||||||||||||||||||||| Sbjct: 21713558 acgg---cggcgc---cggctacgacatggccggctacg 21713590 Score = 81.8 bits (41), Expect = 9e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 434 caggccgaatacttccgccagctactcaagcccgtgacgtagatt 478 ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 21713238 caggccgaatacttccgccagctgctcaagcccgtgacgtagatt 21713282 >dbj|AK101749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061P20, full insert sequence Length = 1815 Score = 280 bits (141), Expect = 2e-71 Identities = 197/215 (91%), Gaps = 3/215 (1%) Strand = Plus / Plus Query: 1044 cggctttgatcagaactacgccagcaagagcgcctactacggtggc---ggcgacgacgg 1100 |||||| || ||| ||||||||||||||||||||||||| || | | | ||||| ||| Sbjct: 989 cggcttcgagcaggactacgccagcaagagcgcctactatggcgtcgaggacgacggcgg 1048 Query: 1101 cggtgggtgctcgatccggcagaaggaggacaccgacgagatcgacgcgctgatgagctc 1160 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1049 cggcgggtgctcgatccggcagaaggaggacaccgacgagatcgacgcgctgatgagcac 1108 Query: 1161 cgaggacggcgaggaggaggacgacgtgctgagcacgggccgcacgccggggtgccgcgc 1220 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || Sbjct: 1109 ggaggacggcgaggaggaggacgacgtcctgagcacgggccgcacgcctgggtgccgggc 1168 Query: 1221 cgggggctcgccggactccacgtgctcctccggcg 1255 ||||||||||||||||||||||||||| ||||||| Sbjct: 1169 cgggggctcgccggactccacgtgctcgtccggcg 1203 Score = 280 bits (141), Expect = 2e-71 Identities = 168/177 (94%) Strand = Plus / Plus Query: 1307 ccggcgacggcgagaggaagaaggagcggatgaagaagatgatgcggacgctcaagggga 1366 |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1243 ccggcggcggcgagaggaagaaggagcggatgaagaagatgatgcggactctcaagggga 1302 Query: 1367 tcatccccggcggcgatcggatggacacgcccgccgtcctcgacgaggccgtcaggtacc 1426 |||||||||||||||| |||||||||| |||||||||||||||||||||||| | |||| Sbjct: 1303 tcatccccggcggcgacaggatggacacccccgccgtcctcgacgaggccgtccgctacc 1362 Query: 1427 tcaagtcgctcaaggtggaggtcaagaagctcggcgtgcgcggatcaagcagctagc 1483 |||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 1363 tcaagtcgctcaaggtggaggtcaagaagctcggcgtgcgtggctcaagcagctagc 1419 Score = 242 bits (122), Expect = 4e-60 Identities = 131/134 (97%) Strand = Plus / Plus Query: 875 ggcagcacgacttcccggcgccgctcaccgggctcgagttccagccgtcggacacctgcc 934 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 805 ggcagcacgacttcccggcgccgctcaccggtgtcgagttccagccgtcggacacctgcc 864 Query: 935 ccaagaactacgtcatcttcgaccagacctacgaccggagccgggtcatgttccaccctt 994 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 865 ccaagaactacgtcatcttcgaccagacctacgaccggagccgggtcatgttccaccctt 924 Query: 995 ccctggccaacaac 1008 | |||||||||||| Sbjct: 925 cgctggccaacaac 938 Score = 216 bits (109), Expect = 2e-52 Identities = 133/141 (94%) Strand = Plus / Plus Query: 338 gaggatatgtgcgttgggttcaaccggaggagccttgaagccgtcgttatgacaagtggc 397 ||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 269 gaggacatgtgcgttgggttcaacgggaggagccttgacaccgtcgttatgacaagtggc 328 Query: 398 gccgtcgcgtactactacagattgatgcaagtttgccaggccgaatacttccgccagcta 457 |||||||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 329 gccgtcgcatattactacagattgatgcaagtgtgccaggccgaatacttccgccagctg 388 Query: 458 ctcaagcccgtgacgtagatt 478 ||||||||||||||||||||| Sbjct: 389 ctcaagcccgtgacgtagatt 409 Score = 117 bits (59), Expect = 2e-22 Identities = 90/99 (90%), Gaps = 6/99 (6%) Strand = Plus / Plus Query: 699 cgatgcagggagacccagggtacgggtacggtggctacggctacagctacgggtatggct 758 |||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 625 cgatgcagggcgacccagggtacgggtacggtggctacggctacggctacggctatggct 684 Query: 759 acgggggcggcgctagcggctacgacatggccggctacg 797 |||| |||||| ||||||||||||||||||||||| Sbjct: 685 acgg---cggcgc---cggctacgacatggccggctacg 717 >ref|NM_001053199.1| Oryza sativa (japonica cultivar-group) Os02g0315600 (Os02g0315600) mRNA, complete cds Length = 2167 Score = 186 bits (94), Expect = 2e-43 Identities = 133/146 (91%) Strand = Plus / Plus Query: 1324 aagaaggagcggatgaagaagatgatgcggacgctcaaggggatcatccccggcggcgat 1383 ||||||||||| |||||||||||| |||||||||||||||| || |||||||||||| | Sbjct: 1337 aagaaggagcgcatgaagaagatggtgcggacgctcaagggcattatccccggcggcaac 1396 Query: 1384 cggatggacacgcccgccgtcctcgacgaggccgtcaggtacctcaagtcgctcaaggtg 1443 | |||||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||| Sbjct: 1397 cagatggacacgccggccgtgctcgacgaggccgtccggtacctcaagtctctcaaggtc 1456 Query: 1444 gaggtcaagaagctcggcgtgcgcgg 1469 |||||||||||||| ||||||||||| Sbjct: 1457 gaggtcaagaagcttggcgtgcgcgg 1482 Score = 127 bits (64), Expect = 2e-25 Identities = 118/136 (86%) Strand = Plus / Plus Query: 879 gcacgacttcccggcgccgctcaccgggctcgagttccagccgtcggacacctgccccaa 938 ||||||||||||||||||| | | || ||| |||||||||||||||| ||| |||||||| Sbjct: 922 gcacgacttcccggcgccgatgaacgagctggagttccagccgtcggccacgtgccccaa 981 Query: 939 gaactacgtcatcttcgaccagacctacgaccggagccgggtcatgttccacccttccct 998 |||||||||||||||||||||||| | | | ||||||||||||||||||||| || || Sbjct: 982 gaactacgtcatcttcgaccagacgtgcaccaagagccgggtcatgttccacccctcgct 1041 Query: 999 ggccaacaacttcggc 1014 ||| |||| |||||| Sbjct: 1042 ggcgcacaagttcggc 1057 Score = 123 bits (62), Expect = 3e-24 Identities = 121/140 (86%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 1108 tgctcgatccggcagaaggaggacaccgacgagatcgacgcgctgatgagctccgaggac 1167 |||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 1163 tgctcggtgcggcagaaggaggacacggacgagatcgacgcgctgctgagctcggaggac 1222 Query: 1168 ggcgaggaggaggacgacgtgctgagcacgggccgcacgccggggtgccgcgccgggggc 1227 ||| || |||||||||||| |||||||||| ||||| ||||||| ||| | ||| || Sbjct: 1223 ggc---gacgaggacgacgtggtgagcacggggcgcaccccggggtaccgggacggcagc 1279 Query: 1228 tcgccggactccacgtgctc 1247 || |||||||| |||||||| Sbjct: 1280 tccccggactcgacgtgctc 1299