BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem205n06 (1312 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001070180.1| Oryza sativa (japonica cultivar-group) Os09g... 626 e-176 emb|CT835829.1| Oryza sativa (indica cultivar-group) cDNA clone:... 620 e-174 gb|DQ245465.1| Zea mays clone 15808 mRNA sequence 476 e-130 gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome... 232 3e-57 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 232 3e-57 >ref|NM_001070180.1| Oryza sativa (japonica cultivar-group) Os09g0512800 (Os09g0512800) mRNA, complete cds Length = 774 Score = 626 bits (316), Expect = e-176 Identities = 420/454 (92%), Gaps = 3/454 (0%) Strand = Plus / Plus Query: 569 gtccgtggtggcgaagctggagggcggcggggg---gaagggggtgcccaccaccaacta 625 |||||||||||||||| ||||||| ||||| || |||||||||||| ||||||||||| Sbjct: 321 gtccgtggtggcgaagatggaggggggcggaggcgggaagggggtgccgaccaccaacta 380 Query: 626 cgtcgtgccgctcgacaaggccaccggcatgacgcggccgctggtggagatcctgcgcga 685 ||| ||||||||||||||||||||||| |||||||| ||||| || |||||||| || || Sbjct: 381 cgtggtgccgctcgacaaggccaccgggatgacgcgcccgctcgtcgagatcctccggga 440 Query: 686 cctcaacaagcgcgtccccgacaagatcatcgacccagacaccaacaccgtcccctggta 745 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 441 cctcaacaagcgcgtccccgacaagatcatcgaccccgacaccaacaccgtcccctggta 500 Query: 746 ccatgccaatagaatgctgagcttttatgcaccaggttggtgtggagaagttcgtaatgt 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 501 ccatgccaatagaatgctgagcttttatgcaccaggttggtgtggagaagttcgcaatgt 560 Query: 806 tatttattctgacaatggaactgtaactgtggtctatcgggtgatactgagaggaacaga 865 ||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 561 tatttattctgacaatggaactgtaaccgtggtttatcgagtgattctgagaggaacaga 620 Query: 866 tggagaggcatacagagaggccactggcacagcaccagtacacgagggccgtaacgaaga 925 |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| || Sbjct: 621 cggagaggcatacagagaggctactggcacggcaccagtgcacgagggccgtaacgacga 680 Query: 926 cgctgttgcagctgcggaggaagcagcattctgcaaagtctgcgcacggtttggtttcgg 985 |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 681 tgctgttgcggctgcggaggaagcagcgttctgcaaagcctgcgcacggtttggtttcgg 740 Query: 986 cctgtacctgtaccaccaggatgaaattccatag 1019 ||| ||||| ||||||||||| || || |||||| Sbjct: 741 cctctacctataccaccaggacgagatcccatag 774 >emb|CT835829.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA003J21, full insert sequence Length = 976 Score = 620 bits (313), Expect = e-174 Identities = 420/455 (92%), Gaps = 3/455 (0%) Strand = Plus / Plus Query: 569 gtccgtggtggcgaagctggagggcggcggggg---gaagggggtgcccaccaccaacta 625 |||||||||||||||| ||||||| ||||| || |||||||||||| ||||||||||| Sbjct: 200 gtccgtggtggcgaagatggaggggggcggaggcgggaagggggtgccgaccaccaacta 259 Query: 626 cgtcgtgccgctcgacaaggccaccggcatgacgcggccgctggtggagatcctgcgcga 685 ||| ||||||||||||||||||||||| |||||||| ||||| || |||||||| || || Sbjct: 260 cgtggtgccgctcgacaaggccaccgggatgacgcgcccgctcgtcgagatcctccggga 319 Query: 686 cctcaacaagcgcgtccccgacaagatcatcgacccagacaccaacaccgtcccctggta 745 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 320 cctcaacaagcgcgtccccgacaagatcatcgaccccgacaccaacaccgtcccctggta 379 Query: 746 ccatgccaatagaatgctgagcttttatgcaccaggttggtgtggagaagttcgtaatgt 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 380 ccatgccaatagaatgctgagcttttatgcaccaggttggtgtggagaagttcgcaatgt 439 Query: 806 tatttattctgacaatggaactgtaactgtggtctatcgggtgatactgagaggaacaga 865 ||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 440 tatttattctgacaatggaactgtaaccgtggtttatcgagtgattctgagaggaacaga 499 Query: 866 tggagaggcatacagagaggccactggcacagcaccagtacacgagggccgtaacgaaga 925 |||||||||||||||||||| || ||||| |||||||| ||||||||||||||||| || Sbjct: 500 cggagaggcatacagagaggctaccggcacggcaccagtgcacgagggccgtaacgacga 559 Query: 926 cgctgttgcagctgcggaggaagcagcattctgcaaagtctgcgcacggtttggtttcgg 985 |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 560 tgctgttgcggctgcggaggaagcagcgttctgcaaagcctgcgcacggtttggtttcgg 619 Query: 986 cctgtacctgtaccaccaggatgaaattccataga 1020 ||| ||||| ||||||||||| || || ||||||| Sbjct: 620 cctctacctataccaccaggacgagatcccataga 654 >gb|DQ245465.1| Zea mays clone 15808 mRNA sequence Length = 878 Score = 476 bits (240), Expect = e-130 Identities = 390/440 (88%) Strand = Plus / Plus Query: 570 tccgtggtggcgaagctggagggcggcggggggaagggggtgcccaccaccaactacgtc 629 ||||||| ||||||||||||| |||| || |||||||| ||||||||||||||||| Sbjct: 190 tccgtggcggcgaagctggagcgcgggctcggcaagggggttcccaccaccaactacgtg 249 Query: 630 gtgccgctcgacaaggccaccggcatgacgcggccgctggtggagatcctgcgcgacctc 689 ||||||||||||||||||||||| |||||||| ||||| || ||||||||||| |||||| Sbjct: 250 gtgccgctcgacaaggccaccgggatgacgcgcccgctcgtcgagatcctgcgggacctc 309 Query: 690 aacaagcgcgtccccgacaagatcatcgacccagacaccaacaccgtcccctggtaccat 749 |||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| Sbjct: 310 aacaagcgcgtccccgacaagatcatcgaccccgacactaacaccgtcaactggtaccat 369 Query: 750 gccaatagaatgctgagcttttatgcaccaggttggtgtggagaagttcgtaatgttatt 809 ||||| |||||||| || ||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 370 gccaacagaatgcttagtttttacgcaccaggttggtgtggagaagttcgtgatgttatc 429 Query: 810 tattctgacaatggaactgtaactgtggtctatcgggtgatactgagaggaacagatgga 869 ||||| || |||||||||||||| ||||| ||||| |||||||| | |||||| |||||| Sbjct: 430 tattccgagaatggaactgtaaccgtggtatatcgagtgatacttaaaggaactgatgga 489 Query: 870 gaggcatacagagaggccactggcacagcaccagtacacgagggccgtaacgaagacgct 929 |||||||||||||| ||||| |||||||||| |||| ||||| || | ||||| ||| Sbjct: 490 gaggcatacagagatgccacgggcacagcacagttacatgaggggcgcagggaagatgct 549 Query: 930 gttgcagctgcggaggaagcagcattctgcaaagtctgcgcacggtttggtttcggcctg 989 |||||||| || |||||||| |||||||||| || |||||||||||| ||||| |||||| Sbjct: 550 gttgcagccgcagaggaagctgcattctgcagagcctgcgcacggttcggttttggcctg 609 Query: 990 tacctgtaccaccaggatga 1009 |||||||||||||||||||| Sbjct: 610 tacctgtaccaccaggatga 629 >gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 232 bits (117), Expect = 3e-57 Identities = 164/179 (91%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 569 gtccgtggtggcgaagctggagggcggcggggg---gaagggggtgcccaccaccaacta 625 |||||||||||||||| ||||||| ||||| || |||||||||||| ||||||||||| Sbjct: 138975 gtccgtggtggcgaagatggaggggggcggaggcgggaagggggtgccgaccaccaacta 139034 Query: 626 cgtcgtgccgctcgacaaggccaccggcatgacgcggccgctggtggagatcctgcgcga 685 ||| ||||||||||||||||||||||| |||||||| ||||| || |||||||| || || Sbjct: 139035 cgtggtgccgctcgacaaggccaccgggatgacgcgcccgctcgtcgagatcctccggga 139094 Query: 686 cctcaacaagcgcgtccccgacaagatcatcgacccagacaccaacaccgtcccctggt 744 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 139095 cctcaacaagcgcgtccccgacaagatcatcgaccccgacaccaacaccgtcccctggt 139153 Score = 194 bits (98), Expect = 6e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 871 aggcatacagagaggccactggcacagcaccagtacacgagggccgtaacgaagacgctg 930 |||||||||||||||| |||||||| |||||||| ||||||||||||||||| || |||| Sbjct: 141487 aggcatacagagaggctactggcacggcaccagtgcacgagggccgtaacgacgatgctg 141546 Query: 931 ttgcagctgcggaggaagcagcattctgcaaagtctgcgcacggtttggtttcggcctgt 990 |||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||| | Sbjct: 141547 ttgcggctgcggaggaagcagcgttctgcaaagcctgcgcacggtttggtttcggcctct 141606 Query: 991 acctgtaccaccaggatgaaattccataga 1020 |||| ||||||||||| || || ||||||| Sbjct: 141607 acctataccaccaggacgagatcccataga 141636 Score = 143 bits (72), Expect = 2e-30 Identities = 90/96 (93%) Strand = Plus / Plus Query: 778 caggttggtgtggagaagttcgtaatgttatttattctgacaatggaactgtaactgtgg 837 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 141240 caggttggtgtggagaagttcgcaatgttatttattctgacaatggaactgtaaccgtgg 141299 Query: 838 tctatcgggtgatactgagaggaacagatggagagg 873 | ||||| ||||| |||||||||||||| ||||||| Sbjct: 141300 tttatcgagtgattctgagaggaacagacggagagg 141335 Score = 81.8 bits (41), Expect = 7e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 742 ggtaccatgccaatagaatgctgagcttttatgcaccaggt 782 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 140717 ggtaccatgccaatagaatgctgagcttttatgcaccaggt 140757 >dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 232 bits (117), Expect = 3e-57 Identities = 164/179 (91%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 569 gtccgtggtggcgaagctggagggcggcggggg---gaagggggtgcccaccaccaacta 625 |||||||||||||||| ||||||| ||||| || |||||||||||| ||||||||||| Sbjct: 19655900 gtccgtggtggcgaagatggaggggggcggaggcgggaagggggtgccgaccaccaacta 19655959 Query: 626 cgtcgtgccgctcgacaaggccaccggcatgacgcggccgctggtggagatcctgcgcga 685 ||| ||||||||||||||||||||||| |||||||| ||||| || |||||||| || || Sbjct: 19655960 cgtggtgccgctcgacaaggccaccgggatgacgcgcccgctcgtcgagatcctccggga 19656019 Query: 686 cctcaacaagcgcgtccccgacaagatcatcgacccagacaccaacaccgtcccctggt 744 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 19656020 cctcaacaagcgcgtccccgacaagatcatcgaccccgacaccaacaccgtcccctggt 19656078 Score = 194 bits (98), Expect = 6e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 871 aggcatacagagaggccactggcacagcaccagtacacgagggccgtaacgaagacgctg 930 |||||||||||||||| |||||||| |||||||| ||||||||||||||||| || |||| Sbjct: 19658412 aggcatacagagaggctactggcacggcaccagtgcacgagggccgtaacgacgatgctg 19658471 Query: 931 ttgcagctgcggaggaagcagcattctgcaaagtctgcgcacggtttggtttcggcctgt 990 |||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||| | Sbjct: 19658472 ttgcggctgcggaggaagcagcgttctgcaaagcctgcgcacggtttggtttcggcctct 19658531 Query: 991 acctgtaccaccaggatgaaattccataga 1020 |||| ||||||||||| || || ||||||| Sbjct: 19658532 acctataccaccaggacgagatcccataga 19658561 Score = 143 bits (72), Expect = 2e-30 Identities = 90/96 (93%) Strand = Plus / Plus Query: 778 caggttggtgtggagaagttcgtaatgttatttattctgacaatggaactgtaactgtgg 837 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 19658165 caggttggtgtggagaagttcgcaatgttatttattctgacaatggaactgtaaccgtgg 19658224 Query: 838 tctatcgggtgatactgagaggaacagatggagagg 873 | ||||| ||||| |||||||||||||| ||||||| Sbjct: 19658225 tttatcgagtgattctgagaggaacagacggagagg 19658260 Score = 81.8 bits (41), Expect = 7e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 742 ggtaccatgccaatagaatgctgagcttttatgcaccaggt 782 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 19657642 ggtaccatgccaatagaatgctgagcttttatgcaccaggt 19657682