BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem205h19 (766 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT829944.1| Oryza sativa (indica cultivar-group) cDNA clone:... 347 4e-92 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 339 1e-89 emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4,... 339 1e-89 ref|NM_001060379.1| Oryza sativa (japonica cultivar-group) Os04g... 299 9e-78 ref|NM_001060380.1| Oryza sativa (japonica cultivar-group) Os04g... 236 1e-58 >emb|CT829944.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN008A11, full insert sequence Length = 943 Score = 347 bits (175), Expect = 4e-92 Identities = 241/263 (91%) Strand = Plus / Plus Query: 246 cgccgacgggcaagtgcccgatcaacacgctgaagctgctggcgtgcgtggacgtgctca 305 |||||||||| ||||||||| | ||||||||||||||||||||||||||||||| ||| | Sbjct: 264 cgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctga 323 Query: 306 acggcctggttcacgcggtggtcggcggcagcgccagcgaggcgtgctgcccgctgctgt 365 |||| ||||| |||||||||||||||| || |||||||| | |||||||||||||||| Sbjct: 324 acgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctgt 383 Query: 366 ccggcgtcgccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcgc 425 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 384 ccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcgc 443 Query: 426 tcagcgtcagcctcgtgctgcccatcgccatcgaggtgctcgtcaacgagtgcggcaagc 485 || ||||||||||||| || ||| |||||||| ||||||||||||||||||||||||| Sbjct: 444 tcggcgtcagcctcgtcctccccgtcgccatctccgtgctcgtcaacgagtgcggcaagc 503 Query: 486 acgtgccctccagcttccagtgc 508 |||| |||||||||||||||||| Sbjct: 504 acgtcccctccagcttccagtgc 526 Score = 81.8 bits (41), Expect = 4e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 89 cagctcgcgccggccgcggcatgcccctactgcccgacgccgaagcctccccctccaccg 148 |||||||||||||||||||| ||| |||||||||||||||||||||| || || || ||| Sbjct: 131 cagctcgcgccggccgcggcgtgctcctactgcccgacgccgaagccgcctccgccgccg 190 Query: 149 ccgcc 153 ||||| Sbjct: 191 ccgcc 195 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 339 bits (171), Expect = 1e-89 Identities = 240/263 (91%) Strand = Plus / Plus Query: 246 cgccgacgggcaagtgcccgatcaacacgctgaagctgctggcgtgcgtggacgtgctca 305 |||||||||| ||||||||| | ||||||||||||||||||||||||||||||| ||| | Sbjct: 31095844 cgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctga 31095903 Query: 306 acggcctggttcacgcggtggtcggcggcagcgccagcgaggcgtgctgcccgctgctgt 365 |||| ||||| |||||||||||||||| || |||||||| | |||||||||||||||| Sbjct: 31095904 acgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctgt 31095963 Query: 366 ccggcgtcgccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcgc 425 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 31095964 ccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcgc 31096023 Query: 426 tcagcgtcagcctcgtgctgcccatcgccatcgaggtgctcgtcaacgagtgcggcaagc 485 || ||||||||||||| || ||| | |||||| ||||||||||||||||||||||||| Sbjct: 31096024 tcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaagc 31096083 Query: 486 acgtgccctccagcttccagtgc 508 |||| |||||||||||||||||| Sbjct: 31096084 acgtcccctccagcttccagtgc 31096106 Score = 299 bits (151), Expect = 9e-78 Identities = 235/263 (89%) Strand = Plus / Plus Query: 246 cgccgacgggcaagtgcccgatcaacacgctgaagctgctggcgtgcgtggacgtgctca 305 |||||||||| ||||||||| | |||||||||||||||||||||||||||||| ||| | Sbjct: 31085425 cgccgacggggaagtgcccggtggacacgctgaagctgctggcgtgcgtggacgcgctga 31085484 Query: 306 acggcctggttcacgcggtggtcggcggcagcgccagcgaggcgtgctgcccgctgctgt 365 |||| ||||| |||||||||||||||| || |||| |||| | |||||||||||||||| Sbjct: 31085485 acgggctggtgcacgcggtggtcggcgccaccgccggcgacacctgctgcccgctgctgt 31085544 Query: 366 ccggcgtcgccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcgc 425 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 31085545 ccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcgc 31085604 Query: 426 tcagcgtcagcctcgtgctgcccatcgccatcgaggtgctcgtcaacgagtgcggcaagc 485 || || |||||||||| || ||| |||||||| ||||||||||| || ||||||||| Sbjct: 31085605 tcggcctcagcctcgtcctccccgtcgccatctccgtgctcgtcaatgactgcggcaagt 31085664 Query: 486 acgtgccctccagcttccagtgc 508 ||||||||||| |||||||||| Sbjct: 31085665 acgtgccctccgacttccagtgc 31085687 Score = 81.8 bits (41), Expect = 4e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 89 cagctcgcgccggccgcggcatgcccctactgcccgacgccgaagcctccccctccaccg 148 |||||||||||||||||||| ||| |||||||||||||||||||||| || || || ||| Sbjct: 31095726 cagctcgcgccggccgcggcgtgctcctactgcccgacgccgaagccgcctccgccgccg 31095785 Query: 149 ccgcc 153 ||||| Sbjct: 31095786 ccgcc 31095790 >emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 339 bits (171), Expect = 1e-89 Identities = 240/263 (91%) Strand = Plus / Plus Query: 246 cgccgacgggcaagtgcccgatcaacacgctgaagctgctggcgtgcgtggacgtgctca 305 |||||||||| ||||||||| | ||||||||||||||||||||||||||||||| ||| | Sbjct: 77925 cgccgacggggaagtgcccggtgaacacgctgaagctgctggcgtgcgtggacgcgctga 77984 Query: 306 acggcctggttcacgcggtggtcggcggcagcgccagcgaggcgtgctgcccgctgctgt 365 |||| ||||| |||||||||||||||| || |||||||| | |||||||||||||||| Sbjct: 77985 acgggctggtgcacgcggtggtcggcgccaaggccagcgacacctgctgcccgctgctgt 78044 Query: 366 ccggcgtcgccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcgc 425 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 78045 ccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcgc 78104 Query: 426 tcagcgtcagcctcgtgctgcccatcgccatcgaggtgctcgtcaacgagtgcggcaagc 485 || ||||||||||||| || ||| | |||||| ||||||||||||||||||||||||| Sbjct: 78105 tcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtcaacgagtgcggcaagc 78164 Query: 486 acgtgccctccagcttccagtgc 508 |||| |||||||||||||||||| Sbjct: 78165 acgtcccctccagcttccagtgc 78187 Score = 299 bits (151), Expect = 9e-78 Identities = 235/263 (89%) Strand = Plus / Plus Query: 246 cgccgacgggcaagtgcccgatcaacacgctgaagctgctggcgtgcgtggacgtgctca 305 |||||||||| ||||||||| | |||||||||||||||||||||||||||||| ||| | Sbjct: 67506 cgccgacggggaagtgcccggtggacacgctgaagctgctggcgtgcgtggacgcgctga 67565 Query: 306 acggcctggttcacgcggtggtcggcggcagcgccagcgaggcgtgctgcccgctgctgt 365 |||| ||||| |||||||||||||||| || |||| |||| | |||||||||||||||| Sbjct: 67566 acgggctggtgcacgcggtggtcggcgccaccgccggcgacacctgctgcccgctgctgt 67625 Query: 366 ccggcgtcgccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcgc 425 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 67626 ccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcgc 67685 Query: 426 tcagcgtcagcctcgtgctgcccatcgccatcgaggtgctcgtcaacgagtgcggcaagc 485 || || |||||||||| || ||| |||||||| ||||||||||| || ||||||||| Sbjct: 67686 tcggcctcagcctcgtcctccccgtcgccatctccgtgctcgtcaatgactgcggcaagt 67745 Query: 486 acgtgccctccagcttccagtgc 508 ||||||||||| |||||||||| Sbjct: 67746 acgtgccctccgacttccagtgc 67768 Score = 81.8 bits (41), Expect = 4e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 89 cagctcgcgccggccgcggcatgcccctactgcccgacgccgaagcctccccctccaccg 148 |||||||||||||||||||| ||| |||||||||||||||||||||| || || || ||| Sbjct: 77807 cagctcgcgccggccgcggcgtgctcctactgcccgacgccgaagccgcctccgccgccg 77866 Query: 149 ccgcc 153 ||||| Sbjct: 77867 ccgcc 77871 >ref|NM_001060379.1| Oryza sativa (japonica cultivar-group) Os04g0612300 (Os04g0612300) mRNA, complete cds Length = 609 Score = 299 bits (151), Expect = 9e-78 Identities = 235/263 (89%) Strand = Plus / Plus Query: 246 cgccgacgggcaagtgcccgatcaacacgctgaagctgctggcgtgcgtggacgtgctca 305 |||||||||| ||||||||| | |||||||||||||||||||||||||||||| ||| | Sbjct: 320 cgccgacggggaagtgcccggtggacacgctgaagctgctggcgtgcgtggacgcgctga 379 Query: 306 acggcctggttcacgcggtggtcggcggcagcgccagcgaggcgtgctgcccgctgctgt 365 |||| ||||| |||||||||||||||| || |||| |||| | |||||||||||||||| Sbjct: 380 acgggctggtgcacgcggtggtcggcgccaccgccggcgacacctgctgcccgctgctgt 439 Query: 366 ccggcgtcgccgacctcgacgccgcgctctgcctctgcaccaccatcaaggccaaggcgc 425 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 440 ccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcgc 499 Query: 426 tcagcgtcagcctcgtgctgcccatcgccatcgaggtgctcgtcaacgagtgcggcaagc 485 || || |||||||||| || ||| |||||||| ||||||||||| || ||||||||| Sbjct: 500 tcggcctcagcctcgtcctccccgtcgccatctccgtgctcgtcaatgactgcggcaagt 559 Query: 486 acgtgccctccagcttccagtgc 508 ||||||||||| |||||||||| Sbjct: 560 acgtgccctccgacttccagtgc 582 >ref|NM_001060380.1| Oryza sativa (japonica cultivar-group) Os04g0612400 (Os04g0612400) mRNA, complete cds Length = 713 Score = 236 bits (119), Expect = 1e-58 Identities = 149/159 (93%) Strand = Plus / Minus Query: 350 tgctgcccgctgctgtccggcgtcgccgacctcgacgccgcgctctgcctctgcaccacc 409 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 556 tgctgcccgctgctgtccggcgtcgccgacctcgacgccgcgctctgcctctgcaccgcc 497 Query: 410 atcaaggccaaggcgctcagcgtcagcctcgtgctgcccatcgccatcgaggtgctcgtc 469 |||||||||||||||||| ||||||||||||| || ||| | |||||| ||||||||| Sbjct: 496 atcaaggccaaggcgctcggcgtcagcctcgtcctccccgttgccatctccgtgctcgtc 437 Query: 470 aacgagtgcggcaagcacgtgccctccagcttccagtgc 508 |||||||||||||||||||| |||||||||||||||||| Sbjct: 436 aacgagtgcggcaagcacgtcccctccagcttccagtgc 398