BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem205f16 (1787 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001061667.1| Oryza sativa (japonica cultivar-group) Os05g... 270 2e-68 gb|AC096707.2| Oryza sativa (japonica cultivar-group) chromosome... 270 2e-68 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 270 2e-68 dbj|AK072411.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 2e-68 >ref|NM_001061667.1| Oryza sativa (japonica cultivar-group) Os05g0299700 (Os05g0299700) mRNA, complete cds Length = 2359 Score = 270 bits (136), Expect = 2e-68 Identities = 268/311 (86%), Gaps = 2/311 (0%) Strand = Plus / Plus Query: 1329 gaagactaatcctggagatgctgcaagtgaaacatgctgtcattccaagggcgatccaaa 1388 ||||||||||||||||||||||||||||||| |||||||| | | || | || || ||| Sbjct: 1934 gaagactaatcctggagatgctgcaagtgaatcatgctgtaactacatgagctattcaag 1993 Query: 1389 agcatgaactctgcatatttgtgaagtaattcccatacaactgagctcttagtagcatag 1448 ||||||| ||||||| |||||||||||||||||||||| | ||| | |||||| |||| Sbjct: 1994 agcatgatatctgcatgtttgtgaagtaattcccatacagccgaggccatagtaggatag 2053 Query: 1449 aagtctgcattgagcgtaaaatccatgggtcggttgttgtgggagaatgctgcacgcttg 1508 ||||| ||| |||| |||||| ||||||||| || |||||||||| ||| ||| |||| Sbjct: 2054 cagtctacatcaagcgaaaaatctatgggtcggctgatgtgggagaaagcttcactcttg 2113 Query: 1509 ttcttcatccgtcgtcggttcactccatagct--tgctcaagctaccacgcacacggatg 1566 ||| || |||| | ||| | ||| |||||||| | |||||||||||||||||||||||| Sbjct: 2114 ttcatcgtccgccttcgatgcacaccatagctccttctcaagctaccacgcacacggatg 2173 Query: 1567 attgcatttgtactgtccagtcataattttattggatccaacaatttattgtggtatatt 1626 || ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2174 atagcaagtgtactgtccagtcataattttattggatccaacaatttattgtagtatatt 2233 Query: 1627 gtaatctttct 1637 ||||||||||| Sbjct: 2234 gtaatctttct 2244 Score = 224 bits (113), Expect = 1e-54 Identities = 182/205 (88%) Strand = Plus / Plus Query: 1099 ggtgctatttgttaaccggtgcaacgtgtgctgcaagaggattggtttgagtgggttccg 1158 |||||| |||||||||||||||||||||||| |||||||| | ||||||| || ||||| Sbjct: 1202 ggtgctgtttgttaaccggtgcaacgtgtgccgcaagagggtcggtttgaccggattccg 1261 Query: 1159 gtgccggtgtggggagctcttctgtccccgccaccggcattcggagactcatatctgctc 1218 |||||| || ||||||||||||||||| |||||||||||||| ||||| ||| ||||| Sbjct: 1262 gtgccgctgcggggagctcttctgtcctcgccaccggcattccgagacccatgagtgctc 1321 Query: 1219 gtttgattataaaactgctggccgggaggagattgcccgtgcgaacccagtgatcagggc 1278 || ||||||||||| || ||| |||||||||||||||| ||||| || ||||||||||| Sbjct: 1322 cttcgattataaaaccgcgggcagggaggagattgcccgcgcgaatcctgtgatcagggc 1381 Query: 1279 tgccaagatcattaagatctgaggt 1303 ||||||||||||||||||||||||| Sbjct: 1382 tgccaagatcattaagatctgaggt 1406 Score = 155 bits (78), Expect = 7e-34 Identities = 184/215 (85%), Gaps = 7/215 (3%) Strand = Plus / Plus Query: 709 aactccatttcttgctcttactacgcccgattccccctgatctgatcgttcaagcttggg 768 |||||||||||||||| || |||||||| |||| ||||||||| | || |||||||||| Sbjct: 775 aactccatttcttgctgttcctacgcccaattcgtcctgatctggttgtccaagcttggg 834 Query: 769 attcgcctc-agtttgcttgatttgttcatcagtgtcgaatccaatggcgcaggaaagct 827 ||||||||| | || |||||||||||| || | || ||||| ||||||||||| |||| Sbjct: 835 attcgcctccacttcccttgatttgttcgtccgcgttaaatccgatggcgcaggagagct 894 Query: 828 gtgatctcaacaaggacgaggccgagatcttgaagcc--ca-catcctcctcaccttctc 884 |||||||||||||||||||||| |||||||||||||| || |||| |||||||||| Sbjct: 895 gtgatctcaacaaggacgaggctgagatcttgaagccatcatcatcatcctcacctt--- 951 Query: 885 ctccttccccaaccccagcctcaccaccaccacca 919 |||||||||||||| ||||||| ||| | |||||| Sbjct: 952 ctccttccccaaccacagcctccccatcgccacca 986 >gb|AC096707.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1583_A05, complete sequence Length = 126987 Score = 270 bits (136), Expect = 2e-68 Identities = 268/311 (86%), Gaps = 2/311 (0%) Strand = Plus / Minus Query: 1329 gaagactaatcctggagatgctgcaagtgaaacatgctgtcattccaagggcgatccaaa 1388 ||||||||||||||||||||||||||||||| |||||||| | | || | || || ||| Sbjct: 66231 gaagactaatcctggagatgctgcaagtgaatcatgctgtaactacatgagctattcaag 66172 Query: 1389 agcatgaactctgcatatttgtgaagtaattcccatacaactgagctcttagtagcatag 1448 ||||||| ||||||| |||||||||||||||||||||| | ||| | |||||| |||| Sbjct: 66171 agcatgatatctgcatgtttgtgaagtaattcccatacagccgaggccatagtaggatag 66112 Query: 1449 aagtctgcattgagcgtaaaatccatgggtcggttgttgtgggagaatgctgcacgcttg 1508 ||||| ||| |||| |||||| ||||||||| || |||||||||| ||| ||| |||| Sbjct: 66111 cagtctacatcaagcgaaaaatctatgggtcggctgatgtgggagaaagcttcactcttg 66052 Query: 1509 ttcttcatccgtcgtcggttcactccatagct--tgctcaagctaccacgcacacggatg 1566 ||| || |||| | ||| | ||| |||||||| | |||||||||||||||||||||||| Sbjct: 66051 ttcatcgtccgccttcgatgcacaccatagctccttctcaagctaccacgcacacggatg 65992 Query: 1567 attgcatttgtactgtccagtcataattttattggatccaacaatttattgtggtatatt 1626 || ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 65991 atagcaagtgtactgtccagtcataattttattggatccaacaatttattgtagtatatt 65932 Query: 1627 gtaatctttct 1637 ||||||||||| Sbjct: 65931 gtaatctttct 65921 Score = 224 bits (113), Expect = 1e-54 Identities = 182/205 (88%) Strand = Plus / Minus Query: 1099 ggtgctatttgttaaccggtgcaacgtgtgctgcaagaggattggtttgagtgggttccg 1158 |||||| |||||||||||||||||||||||| |||||||| | ||||||| || ||||| Sbjct: 66963 ggtgctgtttgttaaccggtgcaacgtgtgccgcaagagggtcggtttgaccggattccg 66904 Query: 1159 gtgccggtgtggggagctcttctgtccccgccaccggcattcggagactcatatctgctc 1218 |||||| || ||||||||||||||||| |||||||||||||| ||||| ||| ||||| Sbjct: 66903 gtgccgctgcggggagctcttctgtcctcgccaccggcattccgagacccatgagtgctc 66844 Query: 1219 gtttgattataaaactgctggccgggaggagattgcccgtgcgaacccagtgatcagggc 1278 || ||||||||||| || ||| |||||||||||||||| ||||| || ||||||||||| Sbjct: 66843 cttcgattataaaaccgcgggcagggaggagattgcccgcgcgaatcctgtgatcagggc 66784 Query: 1279 tgccaagatcattaagatctgaggt 1303 ||||||||||||||||||||||||| Sbjct: 66783 tgccaagatcattaagatctgaggt 66759 Score = 155 bits (78), Expect = 7e-34 Identities = 184/215 (85%), Gaps = 7/215 (3%) Strand = Plus / Minus Query: 709 aactccatttcttgctcttactacgcccgattccccctgatctgatcgttcaagcttggg 768 |||||||||||||||| || |||||||| |||| ||||||||| | || |||||||||| Sbjct: 67390 aactccatttcttgctgttcctacgcccaattcgtcctgatctggttgtccaagcttggg 67331 Query: 769 attcgcctc-agtttgcttgatttgttcatcagtgtcgaatccaatggcgcaggaaagct 827 ||||||||| | || |||||||||||| || | || ||||| ||||||||||| |||| Sbjct: 67330 attcgcctccacttcccttgatttgttcgtccgcgttaaatccgatggcgcaggagagct 67271 Query: 828 gtgatctcaacaaggacgaggccgagatcttgaagcc--ca-catcctcctcaccttctc 884 |||||||||||||||||||||| |||||||||||||| || |||| |||||||||| Sbjct: 67270 gtgatctcaacaaggacgaggctgagatcttgaagccatcatcatcatcctcacctt--- 67214 Query: 885 ctccttccccaaccccagcctcaccaccaccacca 919 |||||||||||||| ||||||| ||| | |||||| Sbjct: 67213 ctccttccccaaccacagcctccccatcgccacca 67179 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 270 bits (136), Expect = 2e-68 Identities = 268/311 (86%), Gaps = 2/311 (0%) Strand = Plus / Minus Query: 1329 gaagactaatcctggagatgctgcaagtgaaacatgctgtcattccaagggcgatccaaa 1388 ||||||||||||||||||||||||||||||| |||||||| | | || | || || ||| Sbjct: 13288615 gaagactaatcctggagatgctgcaagtgaatcatgctgtaactacatgagctattcaag 13288556 Query: 1389 agcatgaactctgcatatttgtgaagtaattcccatacaactgagctcttagtagcatag 1448 ||||||| ||||||| |||||||||||||||||||||| | ||| | |||||| |||| Sbjct: 13288555 agcatgatatctgcatgtttgtgaagtaattcccatacagccgaggccatagtaggatag 13288496 Query: 1449 aagtctgcattgagcgtaaaatccatgggtcggttgttgtgggagaatgctgcacgcttg 1508 ||||| ||| |||| |||||| ||||||||| || |||||||||| ||| ||| |||| Sbjct: 13288495 cagtctacatcaagcgaaaaatctatgggtcggctgatgtgggagaaagcttcactcttg 13288436 Query: 1509 ttcttcatccgtcgtcggttcactccatagct--tgctcaagctaccacgcacacggatg 1566 ||| || |||| | ||| | ||| |||||||| | |||||||||||||||||||||||| Sbjct: 13288435 ttcatcgtccgccttcgatgcacaccatagctccttctcaagctaccacgcacacggatg 13288376 Query: 1567 attgcatttgtactgtccagtcataattttattggatccaacaatttattgtggtatatt 1626 || ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 13288375 atagcaagtgtactgtccagtcataattttattggatccaacaatttattgtagtatatt 13288316 Query: 1627 gtaatctttct 1637 ||||||||||| Sbjct: 13288315 gtaatctttct 13288305 Score = 224 bits (113), Expect = 1e-54 Identities = 182/205 (88%) Strand = Plus / Minus Query: 1099 ggtgctatttgttaaccggtgcaacgtgtgctgcaagaggattggtttgagtgggttccg 1158 |||||| |||||||||||||||||||||||| |||||||| | ||||||| || ||||| Sbjct: 13289347 ggtgctgtttgttaaccggtgcaacgtgtgccgcaagagggtcggtttgaccggattccg 13289288 Query: 1159 gtgccggtgtggggagctcttctgtccccgccaccggcattcggagactcatatctgctc 1218 |||||| || ||||||||||||||||| |||||||||||||| ||||| ||| ||||| Sbjct: 13289287 gtgccgctgcggggagctcttctgtcctcgccaccggcattccgagacccatgagtgctc 13289228 Query: 1219 gtttgattataaaactgctggccgggaggagattgcccgtgcgaacccagtgatcagggc 1278 || ||||||||||| || ||| |||||||||||||||| ||||| || ||||||||||| Sbjct: 13289227 cttcgattataaaaccgcgggcagggaggagattgcccgcgcgaatcctgtgatcagggc 13289168 Query: 1279 tgccaagatcattaagatctgaggt 1303 ||||||||||||||||||||||||| Sbjct: 13289167 tgccaagatcattaagatctgaggt 13289143 Score = 155 bits (78), Expect = 7e-34 Identities = 184/215 (85%), Gaps = 7/215 (3%) Strand = Plus / Minus Query: 709 aactccatttcttgctcttactacgcccgattccccctgatctgatcgttcaagcttggg 768 |||||||||||||||| || |||||||| |||| ||||||||| | || |||||||||| Sbjct: 13289774 aactccatttcttgctgttcctacgcccaattcgtcctgatctggttgtccaagcttggg 13289715 Query: 769 attcgcctc-agtttgcttgatttgttcatcagtgtcgaatccaatggcgcaggaaagct 827 ||||||||| | || |||||||||||| || | || ||||| ||||||||||| |||| Sbjct: 13289714 attcgcctccacttcccttgatttgttcgtccgcgttaaatccgatggcgcaggagagct 13289655 Query: 828 gtgatctcaacaaggacgaggccgagatcttgaagcc--ca-catcctcctcaccttctc 884 |||||||||||||||||||||| |||||||||||||| || |||| |||||||||| Sbjct: 13289654 gtgatctcaacaaggacgaggctgagatcttgaagccatcatcatcatcctcacctt--- 13289598 Query: 885 ctccttccccaaccccagcctcaccaccaccacca 919 |||||||||||||| ||||||| ||| | |||||| Sbjct: 13289597 ctccttccccaaccacagcctccccatcgccacca 13289563 >dbj|AK072411.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084O03, full insert sequence Length = 2360 Score = 270 bits (136), Expect = 2e-68 Identities = 268/311 (86%), Gaps = 2/311 (0%) Strand = Plus / Plus Query: 1329 gaagactaatcctggagatgctgcaagtgaaacatgctgtcattccaagggcgatccaaa 1388 ||||||||||||||||||||||||||||||| |||||||| | | || | || || ||| Sbjct: 1935 gaagactaatcctggagatgctgcaagtgaatcatgctgtaactacatgagctattcaag 1994 Query: 1389 agcatgaactctgcatatttgtgaagtaattcccatacaactgagctcttagtagcatag 1448 ||||||| ||||||| |||||||||||||||||||||| | ||| | |||||| |||| Sbjct: 1995 agcatgatatctgcatgtttgtgaagtaattcccatacagccgaggccatagtaggatag 2054 Query: 1449 aagtctgcattgagcgtaaaatccatgggtcggttgttgtgggagaatgctgcacgcttg 1508 ||||| ||| |||| |||||| ||||||||| || |||||||||| ||| ||| |||| Sbjct: 2055 cagtctacatcaagcgaaaaatctatgggtcggctgatgtgggagaaagcttcactcttg 2114 Query: 1509 ttcttcatccgtcgtcggttcactccatagct--tgctcaagctaccacgcacacggatg 1566 ||| || |||| | ||| | ||| |||||||| | |||||||||||||||||||||||| Sbjct: 2115 ttcatcgtccgccttcgatgcacaccatagctccttctcaagctaccacgcacacggatg 2174 Query: 1567 attgcatttgtactgtccagtcataattttattggatccaacaatttattgtggtatatt 1626 || ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2175 atagcaagtgtactgtccagtcataattttattggatccaacaatttattgtagtatatt 2234 Query: 1627 gtaatctttct 1637 ||||||||||| Sbjct: 2235 gtaatctttct 2245 Score = 224 bits (113), Expect = 1e-54 Identities = 182/205 (88%) Strand = Plus / Plus Query: 1099 ggtgctatttgttaaccggtgcaacgtgtgctgcaagaggattggtttgagtgggttccg 1158 |||||| |||||||||||||||||||||||| |||||||| | ||||||| || ||||| Sbjct: 1203 ggtgctgtttgttaaccggtgcaacgtgtgccgcaagagggtcggtttgaccggattccg 1262 Query: 1159 gtgccggtgtggggagctcttctgtccccgccaccggcattcggagactcatatctgctc 1218 |||||| || ||||||||||||||||| |||||||||||||| ||||| ||| ||||| Sbjct: 1263 gtgccgctgcggggagctcttctgtcctcgccaccggcattccgagacccatgagtgctc 1322 Query: 1219 gtttgattataaaactgctggccgggaggagattgcccgtgcgaacccagtgatcagggc 1278 || ||||||||||| || ||| |||||||||||||||| ||||| || ||||||||||| Sbjct: 1323 cttcgattataaaaccgcgggcagggaggagattgcccgcgcgaatcctgtgatcagggc 1382 Query: 1279 tgccaagatcattaagatctgaggt 1303 ||||||||||||||||||||||||| Sbjct: 1383 tgccaagatcattaagatctgaggt 1407 Score = 155 bits (78), Expect = 7e-34 Identities = 184/215 (85%), Gaps = 7/215 (3%) Strand = Plus / Plus Query: 709 aactccatttcttgctcttactacgcccgattccccctgatctgatcgttcaagcttggg 768 |||||||||||||||| || |||||||| |||| ||||||||| | || |||||||||| Sbjct: 776 aactccatttcttgctgttcctacgcccaattcgtcctgatctggttgtccaagcttggg 835 Query: 769 attcgcctc-agtttgcttgatttgttcatcagtgtcgaatccaatggcgcaggaaagct 827 ||||||||| | || |||||||||||| || | || ||||| ||||||||||| |||| Sbjct: 836 attcgcctccacttcccttgatttgttcgtccgcgttaaatccgatggcgcaggagagct 895 Query: 828 gtgatctcaacaaggacgaggccgagatcttgaagcc--ca-catcctcctcaccttctc 884 |||||||||||||||||||||| |||||||||||||| || |||| |||||||||| Sbjct: 896 gtgatctcaacaaggacgaggctgagatcttgaagccatcatcatcatcctcacctt--- 952 Query: 885 ctccttccccaaccccagcctcaccaccaccacca 919 |||||||||||||| ||||||| ||| | |||||| Sbjct: 953 ctccttccccaaccacagcctccccatcgccacca 987