BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem205e03 (1493 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001054045.1| Oryza sativa (japonica cultivar-group) Os02g... 466 e-127 dbj|AK073723.1| Oryza sativa (japonica cultivar-group) cDNA clon... 466 e-127 gb|AY104458.1| Zea mays PCO099025 mRNA sequence 212 3e-51 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 165 6e-37 dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic D... 165 6e-37 >ref|NM_001054045.1| Oryza sativa (japonica cultivar-group) Os02g0633400 (Os02g0633400) mRNA, complete cds Length = 1321 Score = 466 bits (235), Expect = e-127 Identities = 370/415 (89%) Strand = Plus / Plus Query: 372 gcggcctctccaagactcgaaacgcgcagacgctgcttccgctcactgtgaagcagatca 431 ||||| || |||||| ||| ||||| ||| ||||||| |||||||| ||||||||||||| Sbjct: 261 gcggcttccccaagagtcggaacgcccaggcgctgctcccgctcaccgtgaagcagatca 320 Query: 432 tggacgcgtcccagaccaacgacgacaagtccaattttgctgtcaatggcacggaggtgt 491 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 321 tggacgcgtcccagaccaacgacgacaagtcgaattttgctgtcaatggcatggaggtgt 380 Query: 492 ccacggttaggcttgtcggacgcatgttgaataaggttgagcgggtgaccgatgtagcgt 551 |||||||||||||||| ||||||||||| |||||| |||| ||||| || |||||| | | Sbjct: 381 ccacggttaggcttgtaggacgcatgttaaataagcttgatcgggttacggatgtatcat 440 Query: 552 tcactcttgatgatggtacaagcaggatagatgtgaatcgctgggaaaacgagagttctg 611 |||||||||||||||||||| ||||| || ||||||||||||||||||||| || ||| Sbjct: 441 tcactcttgatgatggtacaggcagggtacctgtgaatcgctgggaaaacgatagcactg 500 Query: 612 acactaaggaaatgtctggcgtcaaggatggagactatgttattgtcaatggtggtctga 671 | |||||||| ||| ||| | | || |||| |||||||||||||||||||||||||| | Sbjct: 501 atactaaggagatggctgacattcagaatggtgactatgttattgtcaatggtggtctaa 560 Query: 672 aaggttttcaagggaagcgtcatgtggttgcttactctgtgcggcctgtaatcaacttca 731 |||||||||||||||||||||| |||||||||||||||||| ||| | ||| |||||||| Sbjct: 561 aaggttttcaagggaagcgtcaggtggttgcttactctgtgaggcgtataaccaacttca 620 Query: 732 atgatgtcacacatcactttctgcactgcattcatgtgcatttggagctcaccag 786 ||||||| |||||||||||||| |||||| |||||||||| |||||||| ||||| Sbjct: 621 atgatgtaacacatcactttcttcactgcgttcatgtgcacttggagcttaccag 675 >dbj|AK073723.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061H13, full insert sequence Length = 1322 Score = 466 bits (235), Expect = e-127 Identities = 370/415 (89%) Strand = Plus / Plus Query: 372 gcggcctctccaagactcgaaacgcgcagacgctgcttccgctcactgtgaagcagatca 431 ||||| || |||||| ||| ||||| ||| ||||||| |||||||| ||||||||||||| Sbjct: 262 gcggcttccccaagagtcggaacgcccaggcgctgctcccgctcaccgtgaagcagatca 321 Query: 432 tggacgcgtcccagaccaacgacgacaagtccaattttgctgtcaatggcacggaggtgt 491 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 322 tggacgcgtcccagaccaacgacgacaagtcgaattttgctgtcaatggcatggaggtgt 381 Query: 492 ccacggttaggcttgtcggacgcatgttgaataaggttgagcgggtgaccgatgtagcgt 551 |||||||||||||||| ||||||||||| |||||| |||| ||||| || |||||| | | Sbjct: 382 ccacggttaggcttgtaggacgcatgttaaataagcttgatcgggttacggatgtatcat 441 Query: 552 tcactcttgatgatggtacaagcaggatagatgtgaatcgctgggaaaacgagagttctg 611 |||||||||||||||||||| ||||| || ||||||||||||||||||||| || ||| Sbjct: 442 tcactcttgatgatggtacaggcagggtacctgtgaatcgctgggaaaacgatagcactg 501 Query: 612 acactaaggaaatgtctggcgtcaaggatggagactatgttattgtcaatggtggtctga 671 | |||||||| ||| ||| | | || |||| |||||||||||||||||||||||||| | Sbjct: 502 atactaaggagatggctgacattcagaatggtgactatgttattgtcaatggtggtctaa 561 Query: 672 aaggttttcaagggaagcgtcatgtggttgcttactctgtgcggcctgtaatcaacttca 731 |||||||||||||||||||||| |||||||||||||||||| ||| | ||| |||||||| Sbjct: 562 aaggttttcaagggaagcgtcaggtggttgcttactctgtgaggcgtataaccaacttca 621 Query: 732 atgatgtcacacatcactttctgcactgcattcatgtgcatttggagctcaccag 786 ||||||| |||||||||||||| |||||| |||||||||| |||||||| ||||| Sbjct: 622 atgatgtaacacatcactttcttcactgcgttcatgtgcacttggagcttaccag 676 >gb|AY104458.1| Zea mays PCO099025 mRNA sequence Length = 1283 Score = 212 bits (107), Expect = 3e-51 Identities = 423/528 (80%), Gaps = 9/528 (1%) Strand = Plus / Plus Query: 259 cggcggcggcgggcactacgatggcggc---gggggcgccacgaacgccaactccctctt 315 ||||||||||||||||||||| || ||| || |||||| |||||| ||| | ||||| Sbjct: 164 cggcggcggcgggcactacgacggaggcagcggtggcgccgggaacgctaacgcgctctt 223 Query: 316 cggcggcggtggtttcatgccctcgcagtccacgaacgccccggagagcagcagcagcgg 375 ||||||||| || ||||||||||| ||||||||| | |||||||| |||| || Sbjct: 224 cggcggcgggggcttcatgccctcacagtccacggtggtcccggagaacagc------gg 277 Query: 376 cctctccaagactcgaaacgcgcagacgctgcttccgctcactgtgaagcagatcatgga 435 |||||| ||| ||| | ||||||||||||||| |||||||| ||||| |||| |||||| Sbjct: 278 cctctctaagggtcggagcgcgcagacgctgctcccgctcaccgtgaaacagaccatgga 337 Query: 436 cgcgtcccagaccaacgacgacaagtccaattttgctgtcaatggcacggaggtgtccac 495 |||| | || |||| || |||| ||| ||||| || |||| ||| |||||||| || Sbjct: 338 cgcggcgcaaaccagcggtgacaggtctaatttcgccatcaacggcgttgaggtgtctac 397 Query: 496 ggttaggcttgtcggacgcatgttgaataaggttgagcgggtgaccgatgtagcgttcac 555 | |||||||||| ||||||||| | |||||||||||| || || ||||| | ||||| Sbjct: 398 gattaggcttgttggacgcatgctaggtaaggttgagcgtgtcacagatgttgtattcac 457 Query: 556 tcttgatgatggtacaagcaggatagatgtgaatcgctgggaaaacgagagttctgacac 615 ||||||||||||||| ||| |||||||||||||||||||||||| ||| ||| || | Sbjct: 458 tcttgatgatggtactggcaagatagatgtgaatcgctgggaaaatgaggcttccgatgc 517 Query: 616 taaggaaatgtctggcgtcaaggatggagactatgttattgtcaatggtggtctgaaagg 675 |||||| ||| ||| | ||| | | ||||||| || |||| ||| ||| ||||||| Sbjct: 518 taaggagatggctgatgccaataacgagaactatgtcatagtcattggcggtttgaaagg 577 Query: 676 ttttcaagggaagcgtcatgtggttgcttactctgtgcggcctgtaatcaacttcaatga 735 ||||||||| ||||| ||||| ||||| || ||||||||| ||| | ||||||||||| Sbjct: 578 ttttcaaggaaagcgccatgtagttgcctatgctgtgcggcgtgtgacaaacttcaatga 637 Query: 736 tgtcacacatcactttctgcactgcattcatgtgcatttggagctcac 783 | || ||||||||||||||||||||| |||||| |||||||||| Sbjct: 638 aataacctgtcactttctgcactgcattcaggtgcatatggagctcac 685 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 165 bits (83), Expect = 6e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 392 aacgcgcagacgctgcttccgctcactgtgaagcagatcatggacgcgtcccagaccaac 451 ||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 25426473 aacgcccaggcgctgctcccgctcaccgtgaagcagatcatggacgcgtcccagaccaac 25426414 Query: 452 gacgacaagtccaattttgctgtcaatggcacggaggtgtccacggt 498 ||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 25426413 gacgacaagtcgaattttgctgtcaatggcatggaggtgtccacggt 25426367 Score = 123 bits (62), Expect = 2e-24 Identities = 71/74 (95%) Strand = Plus / Minus Query: 639 atggagactatgttattgtcaatggtggtctgaaaggttttcaagggaagcgtcatgtgg 698 |||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 25425632 atggtgactatgttattgtcaatggtggtctaaaaggttttcaagggaagcgtcaggtgg 25425573 Query: 699 ttgcttactctgtg 712 |||||||||||||| Sbjct: 25425572 ttgcttactctgtg 25425559 Score = 103 bits (52), Expect = 2e-18 Identities = 88/100 (88%) Strand = Plus / Minus Query: 496 ggttaggcttgtcggacgcatgttgaataaggttgagcgggtgaccgatgtagcgttcac 555 |||||||||||| ||||||||||| |||||| |||| ||||| || |||||| | ||||| Sbjct: 25425945 ggttaggcttgtaggacgcatgttaaataagcttgatcgggttacggatgtatcattcac 25425886 Query: 556 tcttgatgatggtacaagcaggatagatgtgaatcgctgg 595 |||||||||||||||| ||||| || ||||||||||||| Sbjct: 25425885 tcttgatgatggtacaggcagggtacctgtgaatcgctgg 25425846 Score = 85.7 bits (43), Expect = 5e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 724 caacttcaatgatgtcacacatcactttctgcactgcattcatgtgcatttggagctcac 783 ||||||||||||||| |||||||||||||| |||||| |||||||||| |||||||| || Sbjct: 25424585 caacttcaatgatgtaacacatcactttcttcactgcgttcatgtgcacttggagcttac 25424526 Query: 784 cag 786 ||| Sbjct: 25424525 cag 25424523 >dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1643_A10 Length = 130037 Score = 165 bits (83), Expect = 6e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 392 aacgcgcagacgctgcttccgctcactgtgaagcagatcatggacgcgtcccagaccaac 451 ||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 82135 aacgcccaggcgctgctcccgctcaccgtgaagcagatcatggacgcgtcccagaccaac 82076 Query: 452 gacgacaagtccaattttgctgtcaatggcacggaggtgtccacggt 498 ||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 82075 gacgacaagtcgaattttgctgtcaatggcatggaggtgtccacggt 82029 Score = 123 bits (62), Expect = 2e-24 Identities = 71/74 (95%) Strand = Plus / Minus Query: 639 atggagactatgttattgtcaatggtggtctgaaaggttttcaagggaagcgtcatgtgg 698 |||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 81294 atggtgactatgttattgtcaatggtggtctaaaaggttttcaagggaagcgtcaggtgg 81235 Query: 699 ttgcttactctgtg 712 |||||||||||||| Sbjct: 81234 ttgcttactctgtg 81221 Score = 103 bits (52), Expect = 2e-18 Identities = 88/100 (88%) Strand = Plus / Minus Query: 496 ggttaggcttgtcggacgcatgttgaataaggttgagcgggtgaccgatgtagcgttcac 555 |||||||||||| ||||||||||| |||||| |||| ||||| || |||||| | ||||| Sbjct: 81607 ggttaggcttgtaggacgcatgttaaataagcttgatcgggttacggatgtatcattcac 81548 Query: 556 tcttgatgatggtacaagcaggatagatgtgaatcgctgg 595 |||||||||||||||| ||||| || ||||||||||||| Sbjct: 81547 tcttgatgatggtacaggcagggtacctgtgaatcgctgg 81508 Score = 85.7 bits (43), Expect = 5e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 724 caacttcaatgatgtcacacatcactttctgcactgcattcatgtgcatttggagctcac 783 ||||||||||||||| |||||||||||||| |||||| |||||||||| |||||||| || Sbjct: 80247 caacttcaatgatgtaacacatcactttcttcactgcgttcatgtgcacttggagcttac 80188 Query: 784 cag 786 ||| Sbjct: 80187 cag 80185