BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem205b06 (1442 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001067579.1| Oryza sativa (japonica cultivar-group) Os08g... 244 8e-61 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 157 2e-34 dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic D... 157 2e-34 dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic D... 157 2e-34 gb|AY109662.1| Zea mays CL5418_1 mRNA sequence 92 7e-15 >ref|NM_001067579.1| Oryza sativa (japonica cultivar-group) Os08g0159800 (Os08g0159800) mRNA, complete cds Length = 1104 Score = 244 bits (123), Expect = 8e-61 Identities = 174/191 (91%) Strand = Plus / Plus Query: 1001 gaatgggccaacgcagaagccatcgaattggaagatgaggatctgtaacaagtgggagat 1060 ||||||||| | ||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct: 708 gaatgggccgatgcagaagccgtcgaactggaagacgaggatctgtaacaagtgggagat 767 Query: 1061 gactggctactgcccctttggtagcaagtgccactttgctcatggagctgctgaactcca 1120 |||||| |||||||||||||| ||||| |||||||| ||||||||||| ||||||||||| Sbjct: 768 gactgggtactgcccctttggcagcaaatgccacttcgctcatggagcagctgaactcca 827 Query: 1121 caagtatggtgggggacttgtcgacatggacagcagggacgctgcatcaactcctgactc 1180 ||||||||||||||||||||| ||||| ||||||||||| |||||| ||||||| ||||| Sbjct: 828 caagtatggtgggggacttgttgacatagacagcagggatgctgcagcaactcccgactc 887 Query: 1181 gaagcaggctg 1191 ||||| |||| Sbjct: 888 caagcaagctg 898 Score = 155 bits (78), Expect = 6e-34 Identities = 124/138 (89%), Gaps = 6/138 (4%) Strand = Plus / Plus Query: 241 atggactacaccaacgacatccacatcatcccggacgcagccggccccgacgcctgggcc 300 ||||| |||||||||| ||||||||||||||||||||| || ||||||||||||||||| Sbjct: 1 atggattacaccaacgccatccacatcatcccggacgcggcgggccccgacgcctgggcg 60 Query: 301 aacgcggcggcgccgccgggcggggacgccgggatttgggccacggaggacgact---ac 357 |||||||||| ||| |||||||||||||||||| |||||||| |||||||||| || Sbjct: 61 aacgcggcgg---cgcagggcggggacgccgggatatgggccaccgaggacgactacaac 117 Query: 358 agccagtggaacgccgac 375 |||||||||||||||||| Sbjct: 118 agccagtggaacgccgac 135 Score = 149 bits (75), Expect = 4e-32 Identities = 156/183 (85%) Strand = Plus / Plus Query: 563 cttcaggaccaagctctgctgcaacgtctggacgggaacatgcccgtatgtcaccaactg 622 ||||| ||| ||||| |||||||| || || |||| || ||||| || ||||||||||| Sbjct: 261 cttcaagacgaagctgtgctgcaagttcagggcggggacctgcccctacgtcaccaactg 320 Query: 623 caactttgctcatagcgtggaggagctgcgcaagctgccgcccaactggctggaaatcat 682 |||||| || || || |||||||||| ||||||| |||||||||||||| ||| ||| | Sbjct: 321 caacttcgcccacggcatggaggagctccgcaagccgccgcccaactggcaggagatcgt 380 Query: 683 ggcggcgcacgaggaggcgacggagcagagggaggagcaccagatcccgatcatgacctc 742 ||||||||||||||||| |||||| ||||||||||||||||||||| |||||||| || Sbjct: 381 cgcggcgcacgaggaggccacggaggcgagggaggagcaccagatccccatcatgacgtc 440 Query: 743 gtc 745 ||| Sbjct: 441 gtc 443 Score = 143 bits (72), Expect = 2e-30 Identities = 114/128 (89%) Strand = Plus / Plus Query: 771 tccggcagggcgtacaaggggcggcactgcaagaagttctacaccgaggagggatgccct 830 ||||| ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 496 tccgggagggcctacaaggggaggcactgcaagaagttctacaccgacgagggatgcccc 555 Query: 831 tacggtgacgcgtgcaccttcttgcacgacgagcaatccaaggcgcgggagagcgtggcg 890 ||||| ||||||||||| ||| | ||||||||||| |||||||| |||||||||| ||| Sbjct: 556 tacggcgacgcgtgcacgttcctccacgacgagcagtccaaggccagggagagcgtcgcg 615 Query: 891 ataagcct 898 || ||||| Sbjct: 616 atcagcct 623 >dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 157 bits (79), Expect = 2e-34 Identities = 125/139 (89%), Gaps = 6/139 (4%) Strand = Plus / Minus Query: 240 gatggactacaccaacgacatccacatcatcccggacgcagccggccccgacgcctgggc 299 |||||| |||||||||| ||||||||||||||||||||| || ||||||||||||||||| Sbjct: 3505664 gatggattacaccaacgccatccacatcatcccggacgcggcgggccccgacgcctgggc 3505605 Query: 300 caacgcggcggcgccgccgggcggggacgccgggatttgggccacggaggacgact---a 356 |||||||||| ||| |||||||||||||||||| |||||||| |||||||||| | Sbjct: 3505604 gaacgcggcgg---cgcagggcggggacgccgggatatgggccaccgaggacgactacaa 3505548 Query: 357 cagccagtggaacgccgac 375 ||||||||||||||||||| Sbjct: 3505547 cagccagtggaacgccgac 3505529 Score = 149 bits (75), Expect = 4e-32 Identities = 156/183 (85%) Strand = Plus / Minus Query: 563 cttcaggaccaagctctgctgcaacgtctggacgggaacatgcccgtatgtcaccaactg 622 ||||| ||| ||||| |||||||| || || |||| || ||||| || ||||||||||| Sbjct: 3505403 cttcaagacgaagctgtgctgcaagttcagggcggggacctgcccctacgtcaccaactg 3505344 Query: 623 caactttgctcatagcgtggaggagctgcgcaagctgccgcccaactggctggaaatcat 682 |||||| || || || |||||||||| ||||||| |||||||||||||| ||| ||| | Sbjct: 3505343 caacttcgcccacggcatggaggagctccgcaagccgccgcccaactggcaggagatcgt 3505284 Query: 683 ggcggcgcacgaggaggcgacggagcagagggaggagcaccagatcccgatcatgacctc 742 ||||||||||||||||| |||||| ||||||||||||||||||||| |||||||| || Sbjct: 3505283 cgcggcgcacgaggaggccacggaggcgagggaggagcaccagatccccatcatgacgtc 3505224 Query: 743 gtc 745 ||| Sbjct: 3505223 gtc 3505221 Score = 145 bits (73), Expect = 6e-31 Identities = 103/113 (91%) Strand = Plus / Minus Query: 1001 gaatgggccaacgcagaagccatcgaattggaagatgaggatctgtaacaagtgggagat 1060 ||||||||| | ||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct: 3504956 gaatgggccgatgcagaagccgtcgaactggaagacgaggatctgtaacaagtgggagat 3504897 Query: 1061 gactggctactgcccctttggtagcaagtgccactttgctcatggagctgctg 1113 |||||| |||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 3504896 gactgggtactgcccctttggcagcaaatgccacttcgctcatggagcagctg 3504844 Score = 143 bits (72), Expect = 2e-30 Identities = 114/128 (89%) Strand = Plus / Minus Query: 771 tccggcagggcgtacaaggggcggcactgcaagaagttctacaccgaggagggatgccct 830 ||||| ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 3505168 tccgggagggcctacaaggggaggcactgcaagaagttctacaccgacgagggatgcccc 3505109 Query: 831 tacggtgacgcgtgcaccttcttgcacgacgagcaatccaaggcgcgggagagcgtggcg 890 ||||| ||||||||||| ||| | ||||||||||| |||||||| |||||||||| ||| Sbjct: 3505108 tacggcgacgcgtgcacgttcctccacgacgagcagtccaaggccagggagagcgtcgcg 3505049 Query: 891 ataagcct 898 || ||||| Sbjct: 3505048 atcagcct 3505041 Score = 101 bits (51), Expect = 8e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 1113 gaactccacaagtatggtgggggacttgtcgacatggacagcagggacgctgcatcaact 1172 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| ||||| Sbjct: 3503034 gaactccacaagtatggtgggggacttgttgacatagacagcagggatgctgcagcaact 3502975 Query: 1173 cctgactcgaagcaggctg 1191 || ||||| ||||| |||| Sbjct: 3502974 cccgactccaagcaagctg 3502956 >dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498E12 Length = 153523 Score = 157 bits (79), Expect = 2e-34 Identities = 125/139 (89%), Gaps = 6/139 (4%) Strand = Plus / Minus Query: 240 gatggactacaccaacgacatccacatcatcccggacgcagccggccccgacgcctgggc 299 |||||| |||||||||| ||||||||||||||||||||| || ||||||||||||||||| Sbjct: 139083 gatggattacaccaacgccatccacatcatcccggacgcggcgggccccgacgcctgggc 139024 Query: 300 caacgcggcggcgccgccgggcggggacgccgggatttgggccacggaggacgact---a 356 |||||||||| ||| |||||||||||||||||| |||||||| |||||||||| | Sbjct: 139023 gaacgcggcgg---cgcagggcggggacgccgggatatgggccaccgaggacgactacaa 138967 Query: 357 cagccagtggaacgccgac 375 ||||||||||||||||||| Sbjct: 138966 cagccagtggaacgccgac 138948 Score = 149 bits (75), Expect = 4e-32 Identities = 156/183 (85%) Strand = Plus / Minus Query: 563 cttcaggaccaagctctgctgcaacgtctggacgggaacatgcccgtatgtcaccaactg 622 ||||| ||| ||||| |||||||| || || |||| || ||||| || ||||||||||| Sbjct: 138822 cttcaagacgaagctgtgctgcaagttcagggcggggacctgcccctacgtcaccaactg 138763 Query: 623 caactttgctcatagcgtggaggagctgcgcaagctgccgcccaactggctggaaatcat 682 |||||| || || || |||||||||| ||||||| |||||||||||||| ||| ||| | Sbjct: 138762 caacttcgcccacggcatggaggagctccgcaagccgccgcccaactggcaggagatcgt 138703 Query: 683 ggcggcgcacgaggaggcgacggagcagagggaggagcaccagatcccgatcatgacctc 742 ||||||||||||||||| |||||| ||||||||||||||||||||| |||||||| || Sbjct: 138702 cgcggcgcacgaggaggccacggaggcgagggaggagcaccagatccccatcatgacgtc 138643 Query: 743 gtc 745 ||| Sbjct: 138642 gtc 138640 Score = 145 bits (73), Expect = 6e-31 Identities = 103/113 (91%) Strand = Plus / Minus Query: 1001 gaatgggccaacgcagaagccatcgaattggaagatgaggatctgtaacaagtgggagat 1060 ||||||||| | ||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct: 138375 gaatgggccgatgcagaagccgtcgaactggaagacgaggatctgtaacaagtgggagat 138316 Query: 1061 gactggctactgcccctttggtagcaagtgccactttgctcatggagctgctg 1113 |||||| |||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 138315 gactgggtactgcccctttggcagcaaatgccacttcgctcatggagcagctg 138263 Score = 143 bits (72), Expect = 2e-30 Identities = 114/128 (89%) Strand = Plus / Minus Query: 771 tccggcagggcgtacaaggggcggcactgcaagaagttctacaccgaggagggatgccct 830 ||||| ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 138587 tccgggagggcctacaaggggaggcactgcaagaagttctacaccgacgagggatgcccc 138528 Query: 831 tacggtgacgcgtgcaccttcttgcacgacgagcaatccaaggcgcgggagagcgtggcg 890 ||||| ||||||||||| ||| | ||||||||||| |||||||| |||||||||| ||| Sbjct: 138527 tacggcgacgcgtgcacgttcctccacgacgagcagtccaaggccagggagagcgtcgcg 138468 Query: 891 ataagcct 898 || ||||| Sbjct: 138467 atcagcct 138460 Score = 101 bits (51), Expect = 8e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 1113 gaactccacaagtatggtgggggacttgtcgacatggacagcagggacgctgcatcaact 1172 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| ||||| Sbjct: 136453 gaactccacaagtatggtgggggacttgttgacatagacagcagggatgctgcagcaact 136394 Query: 1173 cctgactcgaagcaggctg 1191 || ||||| ||||| |||| Sbjct: 136393 cccgactccaagcaagctg 136375 >dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 157 bits (79), Expect = 2e-34 Identities = 125/139 (89%), Gaps = 6/139 (4%) Strand = Plus / Minus Query: 240 gatggactacaccaacgacatccacatcatcccggacgcagccggccccgacgcctgggc 299 |||||| |||||||||| ||||||||||||||||||||| || ||||||||||||||||| Sbjct: 61381 gatggattacaccaacgccatccacatcatcccggacgcggcgggccccgacgcctgggc 61322 Query: 300 caacgcggcggcgccgccgggcggggacgccgggatttgggccacggaggacgact---a 356 |||||||||| ||| |||||||||||||||||| |||||||| |||||||||| | Sbjct: 61321 gaacgcggcgg---cgcagggcggggacgccgggatatgggccaccgaggacgactacaa 61265 Query: 357 cagccagtggaacgccgac 375 ||||||||||||||||||| Sbjct: 61264 cagccagtggaacgccgac 61246 Score = 149 bits (75), Expect = 4e-32 Identities = 156/183 (85%) Strand = Plus / Minus Query: 563 cttcaggaccaagctctgctgcaacgtctggacgggaacatgcccgtatgtcaccaactg 622 ||||| ||| ||||| |||||||| || || |||| || ||||| || ||||||||||| Sbjct: 61120 cttcaagacgaagctgtgctgcaagttcagggcggggacctgcccctacgtcaccaactg 61061 Query: 623 caactttgctcatagcgtggaggagctgcgcaagctgccgcccaactggctggaaatcat 682 |||||| || || || |||||||||| ||||||| |||||||||||||| ||| ||| | Sbjct: 61060 caacttcgcccacggcatggaggagctccgcaagccgccgcccaactggcaggagatcgt 61001 Query: 683 ggcggcgcacgaggaggcgacggagcagagggaggagcaccagatcccgatcatgacctc 742 ||||||||||||||||| |||||| ||||||||||||||||||||| |||||||| || Sbjct: 61000 cgcggcgcacgaggaggccacggaggcgagggaggagcaccagatccccatcatgacgtc 60941 Query: 743 gtc 745 ||| Sbjct: 60940 gtc 60938 Score = 145 bits (73), Expect = 6e-31 Identities = 103/113 (91%) Strand = Plus / Minus Query: 1001 gaatgggccaacgcagaagccatcgaattggaagatgaggatctgtaacaagtgggagat 1060 ||||||||| | ||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct: 60673 gaatgggccgatgcagaagccgtcgaactggaagacgaggatctgtaacaagtgggagat 60614 Query: 1061 gactggctactgcccctttggtagcaagtgccactttgctcatggagctgctg 1113 |||||| |||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 60613 gactgggtactgcccctttggcagcaaatgccacttcgctcatggagcagctg 60561 Score = 143 bits (72), Expect = 2e-30 Identities = 114/128 (89%) Strand = Plus / Minus Query: 771 tccggcagggcgtacaaggggcggcactgcaagaagttctacaccgaggagggatgccct 830 ||||| ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 60885 tccgggagggcctacaaggggaggcactgcaagaagttctacaccgacgagggatgcccc 60826 Query: 831 tacggtgacgcgtgcaccttcttgcacgacgagcaatccaaggcgcgggagagcgtggcg 890 ||||| ||||||||||| ||| | ||||||||||| |||||||| |||||||||| ||| Sbjct: 60825 tacggcgacgcgtgcacgttcctccacgacgagcagtccaaggccagggagagcgtcgcg 60766 Query: 891 ataagcct 898 || ||||| Sbjct: 60765 atcagcct 60758 Score = 101 bits (51), Expect = 8e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 1113 gaactccacaagtatggtgggggacttgtcgacatggacagcagggacgctgcatcaact 1172 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| ||||| Sbjct: 58751 gaactccacaagtatggtgggggacttgttgacatagacagcagggatgctgcagcaact 58692 Query: 1173 cctgactcgaagcaggctg 1191 || ||||| ||||| |||| Sbjct: 58691 cccgactccaagcaagctg 58673 >gb|AY109662.1| Zea mays CL5418_1 mRNA sequence Length = 985 Score = 91.7 bits (46), Expect = 7e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 776 cagggcgtacaaggggcggcactgcaagaagttctacaccgaggagggatgcccttacgg 835 |||||| | |||||| || |||||||||||||||||||| || ||||| ||||| || || Sbjct: 42 cagggcattcaagggccgtcactgcaagaagttctacactgaagagggctgcccctatgg 101 Query: 836 tgacgcgtgcaccttcttgcacgacgagcaatccaaggcgcgggagagcgtggc 889 |||| | ||||||||| |||| || ||||| || ||||| |||||||||||||| Sbjct: 102 tgacacatgcaccttcctgcatgatgagcagtctaaggcacgggagagcgtggc 155