BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem204o18 (1932 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001048777.1| Oryza sativa (japonica cultivar-group) Os01g... 297 9e-77 ref|NM_001054785.1| Oryza sativa (japonica cultivar-group) Os02g... 218 6e-53 gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence 216 3e-52 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 167 2e-37 dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic D... 167 2e-37 >ref|NM_001048777.1| Oryza sativa (japonica cultivar-group) Os01g0185900 (Os01g0185900) mRNA, complete cds Length = 1524 Score = 297 bits (150), Expect = 9e-77 Identities = 252/286 (88%) Strand = Plus / Plus Query: 816 gcagcagcaagccaggaaggctagggtttccgtccgggtgaaatgcgacacgcccacgat 875 ||||||||| |||| ||||||||||||||||||| | || || |||||||| |||||||| Sbjct: 651 gcagcagcaggccaagaaggctagggtttccgtcagagtcaagtgcgacacccccacgat 710 Query: 876 gaacgatgggtgccaatggaggaagtacgggcagaagatctccaagggaaacccctgccc 935 |||||||||||| || ||| |||| ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 711 gaacgatgggtgtcagtggcggaaatacgggcagaaaatctcaaaggggaacccttgccc 770 Query: 936 gcgcgcctactaccgctgcaccgttgcaccctcctgcccggtcaggaagcaggtgcagag 995 ||||||||| ||||| ||||||||||||||| |||||| || | |||||||||||||| Sbjct: 771 gcgcgcctattaccgttgcaccgttgcacccaactgccctgtacgcaagcaggtgcagag 830 Query: 996 atgcgtggatgacatgtcgatcctgatcacgacgtacgagggcacgcatagccacccgct 1055 ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 831 atgcgcggacgacatgtcgatcctgatcacgacgtacgagggcacgcacagccacccgct 890 Query: 1056 cccgccggccgctgccgccatggcgtccaccacctccgccgcggcg 1101 |||||||| || || || ||||||||||| || || ||||||||| Sbjct: 891 gccgccggcggcggcggcgatggcgtccacaacgtcggccgcggcg 936 Score = 172 bits (87), Expect = 3e-39 Identities = 138/155 (89%) Strand = Plus / Plus Query: 263 tcatcaagaaggatgacaagctagaggcgaccaaggcggagatgggcgaggtgagggagg 322 ||||||||||||| || ||| | ||||| | |||||||||||||||||||||||||||| Sbjct: 125 tcatcaagaaggaggagaagatggaggcagcgaaggcggagatgggcgaggtgagggagg 184 Query: 323 agaacgagcgcctcaagacgctgctctcccacatcgtcagggactaccagtcgctccaga 382 |||||||||| ||||||||| ||||| | | ||||||||| |||||| ||||||| || | Sbjct: 185 agaacgagcggctcaagacgatgctcacacgcatcgtcagcgactacaagtcgctgcaca 244 Query: 383 tgcacttcctcgacgtcgtcaaggtcaaggagcaa 417 |||||||||||||||||||||||||||||||||| Sbjct: 245 cgcacttcctcgacgtcgtcaaggtcaaggagcaa 279 Score = 167 bits (84), Expect = 2e-37 Identities = 96/100 (96%) Strand = Plus / Plus Query: 1158 cggcgccgggctcctcggtccgaccaccatctccaccgccacgtcctgccccaccgtcac 1217 ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1032 cggcgtcgggctgctcggcccgaccaccatctccaccgccacgtcctgccccaccgtcac 1091 Query: 1218 gctcgacctcaccgcgccgcactccctcctgcacccgtcg 1257 |||||||||||||||||||||||| ||||||||||||||| Sbjct: 1092 gctcgacctcaccgcgccgcactcgctcctgcacccgtcg 1131 Score = 141 bits (71), Expect = 1e-29 Identities = 95/103 (92%) Strand = Plus / Plus Query: 1472 tgacggacacgattgcgaaggcgatcacgtcggacccgagctttcaatcggtgctggcgg 1531 ||||||||||||| ||||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 1409 tgacggacacgatcgcgaaggcgatcacgtcggacccgagcttccagtcggttttggcgg 1468 Query: 1532 cggcgatcacttcgtacatggggcgcggcggcggggcggcggc 1574 |||||||||| || |||||||||||||||||||| |||||||| Sbjct: 1469 cggcgatcacgtcctacatggggcgcggcggcggcgcggcggc 1511 Score = 107 bits (54), Expect = 2e-19 Identities = 68/72 (94%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 1263 cgccgccgcggggtacgaatccag---ggcgctgccggcggcgtggagcagcgggtacct 1319 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 1152 cgccgccgcggggtacgagtccagcagggcgctgccggcggcgtggagcagcgggtacct 1211 Query: 1320 ggcgtacggcgg 1331 |||||||||||| Sbjct: 1212 ggcgtacggcgg 1223 >ref|NM_001054785.1| Oryza sativa (japonica cultivar-group) Os02g0770500 (Os02g0770500) mRNA, complete cds Length = 1914 Score = 218 bits (110), Expect = 6e-53 Identities = 205/234 (87%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 868 cccacgatgaacgatgggtgccaatggaggaagtacgggcagaagatctccaagggaaac 927 ||||| ||||||||||||||||||||| |||| |||||||||||| || ||||||| ||| Sbjct: 1198 cccaccatgaacgatgggtgccaatggcggaaatacgggcagaaggtcgccaagggcaac 1257 Query: 928 ccctgcccgcgcgcctactaccgctgcaccgttgcaccctcctgcccggtcaggaagcag 987 || |||||||| || |||||||| |||||||| || || ||||||||| |||||||| Sbjct: 1258 ccgtgcccgcgagcttactaccggtgcaccgtcgcgccgggctgcccggtgcggaagcag 1317 Query: 988 gtgcagagatgcgtggatgacatgtcgatcctgatcacgacgtacgagggcacgcatagc 1047 |||||||||||| | || ||||||||||||||| | |||||||||||||||||||| | | Sbjct: 1318 gtgcagagatgcctcgaggacatgtcgatcctggtgacgacgtacgagggcacgcacaac 1377 Query: 1048 cacccgctccc-gccggccgctgccgccatggcgtccaccacctccgccgcggc 1100 ||||||||||| | |||| || ||||||||||||||||||||||||||||||| Sbjct: 1378 cacccgctccccgtcggc-gccaccgccatggcgtccaccacctccgccgcggc 1430 >gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence Length = 138186 Score = 216 bits (109), Expect = 3e-52 Identities = 202/233 (86%) Strand = Plus / Minus Query: 879 cgatgggtgccaatggaggaagtacgggcagaagatctccaagggaaacccctgcccgcg 938 |||||| ||||||||| |||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 30051 cgatggctgccaatggcggaagtacgggcagaagatctccaaggggaacccgtgcccgcg 29992 Query: 939 cgcctactaccgctgcaccgttgcaccctcctgcccggtcaggaagcaggtgcagagatg 998 |||||||||||||||||| || || || ||||||||| ||||||||||||||| | || Sbjct: 29991 cgcctactaccgctgcacggtggcgccgcactgcccggtgaggaagcaggtgcagcggtg 29932 Query: 999 cgtggatgacatgtcgatcctgatcacgacgtacgagggcacgcatagccacccgctccc 1058 || ||| |||| |||| |||||||||| |||||||| || |||| | |||||||||||| Sbjct: 29931 cgcggaggacacgtcggtcctgatcaccacgtacgattgcgcgcacaaccacccgctccc 29872 Query: 1059 gccggccgctgccgccatggcgtccaccacctccgccgcggcgtccatgctca 1111 |||||| || | |||||||||||||| |||||||| |||| | ||||||||| Sbjct: 29871 gccggcggcgacggccatggcgtccacgacctccgcggcggtggccatgctca 29819 Score = 139 bits (70), Expect = 5e-29 Identities = 109/122 (89%) Strand = Plus / Minus Query: 286 gaggcgaccaaggcggagatgggcgaggtgagggaggagaacgagcgcctcaagacgctg 345 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 30873 gaggcggccagggcggagatgggcgaggtgagggaggagaacgagcgcctcaagtcgatg 30814 Query: 346 ctctcccacatcgtcagggactaccagtcgctccagatgcacttcctcgacgtcgtcaag 405 || |||| ||||||| | | |||||||| || |||| |||||||||||||||||||||| Sbjct: 30813 ctgtcccgcatcgtcggccagtaccagtccctgcagacgcacttcctcgacgtcgtcaag 30754 Query: 406 gt 407 || Sbjct: 30753 gt 30752 Score = 97.6 bits (49), Expect = 2e-16 Identities = 79/89 (88%) Strand = Plus / Minus Query: 1474 acggacacgattgcgaaggcgatcacgtcggacccgagctttcaatcggtgctggcggcg 1533 ||||||||| | |||||||||||||||||||| |||||||| || ||||||||||| ||| Sbjct: 29381 acggacacgctcgcgaaggcgatcacgtcggatccgagcttccagtcggtgctggcagcg 29322 Query: 1534 gcgatcacttcgtacatggggcgcggcgg 1562 |||||||| || ||||||||||||||| Sbjct: 29321 gcgatcacgtccgtcatggggcgcggcgg 29293 Score = 83.8 bits (42), Expect = 2e-12 Identities = 71/80 (88%), Gaps = 3/80 (3%) Strand = Plus / Minus Query: 1154 cggccggcgccgggctcctcggtccgaccaccat---ctccaccgccacgtcctgcccca 1210 |||||| ||||||||| ||||| || |||||||| |||||||||| |||||||||||| Sbjct: 29752 cggccgccgccgggcttctcggccccaccaccatggtctccaccgccgcgtcctgcccca 29693 Query: 1211 ccgtcacgctcgacctcacc 1230 || ||||||||||||||||| Sbjct: 29692 ccatcacgctcgacctcacc 29673 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 167 bits (84), Expect = 2e-37 Identities = 96/100 (96%) Strand = Plus / Plus Query: 1158 cggcgccgggctcctcggtccgaccaccatctccaccgccacgtcctgccccaccgtcac 1217 ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4566885 cggcgtcgggctgctcggcccgaccaccatctccaccgccacgtcctgccccaccgtcac 4566944 Query: 1218 gctcgacctcaccgcgccgcactccctcctgcacccgtcg 1257 |||||||||||||||||||||||| ||||||||||||||| Sbjct: 4566945 gctcgacctcaccgcgccgcactcgctcctgcacccgtcg 4566984 Score = 165 bits (83), Expect = 8e-37 Identities = 113/123 (91%) Strand = Plus / Plus Query: 295 aaggcggagatgggcgaggtgagggaggagaacgagcgcctcaagacgctgctctcccac 354 |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | | | Sbjct: 4565781 aaggcggagatgggcgaggtgagggaggagaacgagcggctcaagacgatgctcacacgc 4565840 Query: 355 atcgtcagggactaccagtcgctccagatgcacttcctcgacgtcgtcaaggtcaaggag 414 |||||||| |||||| ||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 4565841 atcgtcagcgactacaagtcgctgcacacgcacttcctcgacgtcgtcaaggtcaaggag 4565900 Query: 415 caa 417 ||| Sbjct: 4565901 caa 4565903 Score = 145 bits (73), Expect = 8e-31 Identities = 106/117 (90%) Strand = Plus / Plus Query: 985 caggtgcagagatgcgtggatgacatgtcgatcctgatcacgacgtacgagggcacgcat 1044 |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4566673 caggtgcagagatgcgcggacgacatgtcgatcctgatcacgacgtacgagggcacgcac 4566732 Query: 1045 agccacccgctcccgccggccgctgccgccatggcgtccaccacctccgccgcggcg 1101 ||||||||||| |||||||| || || || ||||||||||| || || ||||||||| Sbjct: 4566733 agccacccgctgccgccggcggcggcggcgatggcgtccacaacgtcggccgcggcg 4566789 Score = 141 bits (71), Expect = 1e-29 Identities = 95/103 (92%) Strand = Plus / Plus Query: 1472 tgacggacacgattgcgaaggcgatcacgtcggacccgagctttcaatcggtgctggcgg 1531 ||||||||||||| ||||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 4567262 tgacggacacgatcgcgaaggcgatcacgtcggacccgagcttccagtcggttttggcgg 4567321 Query: 1532 cggcgatcacttcgtacatggggcgcggcggcggggcggcggc 1574 |||||||||| || |||||||||||||||||||| |||||||| Sbjct: 4567322 cggcgatcacgtcctacatggggcgcggcggcggcgcggcggc 4567364 Score = 107 bits (54), Expect = 2e-19 Identities = 84/94 (89%) Strand = Plus / Plus Query: 873 gatgaacgatgggtgccaatggaggaagtacgggcagaagatctccaagggaaacccctg 932 ||||||||||||||| || ||| |||| ||||||||||| ||||| ||||| ||||| || Sbjct: 4566437 gatgaacgatgggtgtcagtggcggaaatacgggcagaaaatctcaaaggggaacccttg 4566496 Query: 933 cccgcgcgcctactaccgctgcaccgttgcaccc 966 |||||||||||| ||||| ||||||||||||||| Sbjct: 4566497 cccgcgcgcctattaccgttgcaccgttgcaccc 4566530 Score = 107 bits (54), Expect = 2e-19 Identities = 68/72 (94%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 1263 cgccgccgcggggtacgaatccag---ggcgctgccggcggcgtggagcagcgggtacct 1319 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 4567005 cgccgccgcggggtacgagtccagcagggcgctgccggcggcgtggagcagcgggtacct 4567064 Query: 1320 ggcgtacggcgg 1331 |||||||||||| Sbjct: 4567065 ggcgtacggcgg 4567076 Score = 93.7 bits (47), Expect = 3e-15 Identities = 71/79 (89%) Strand = Plus / Plus Query: 879 cgatgggtgccaatggaggaagtacgggcagaagatctccaagggaaacccctgcccgcg 938 ||||||||||||||||||||||||||| |||||||| | ||||||||||| || || || Sbjct: 8084684 cgatgggtgccaatggaggaagtacggtcagaagatggcgaagggaaacccttgtccacg 8084743 Query: 939 cgcctactaccgctgcacc 957 ||| ||||||||||||||| Sbjct: 8084744 cgcgtactaccgctgcacc 8084762 Score = 85.7 bits (43), Expect = 6e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 1015 atcctgatcacgacgtacgagggcacgcatagccacccgctcccgccggccgctgccgcc 1074 ||||||||||| ||||||||||||||||| | ||||||||| ||||||||||| || Sbjct: 8084969 atcctgatcaccacgtacgagggcacgcacaaccacccgctgccgccggccgcgatggcg 8085028 Query: 1075 atggcgtccaccacctccgccgcggcgtccatgct 1109 |||||||||||||| || || |||||||| ||||| Sbjct: 8085029 atggcgtccaccacgtcggcggcggcgtcgatgct 8085063 >dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F03 Length = 149699 Score = 167 bits (84), Expect = 2e-37 Identities = 96/100 (96%) Strand = Plus / Plus Query: 1158 cggcgccgggctcctcggtccgaccaccatctccaccgccacgtcctgccccaccgtcac 1217 ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 101572 cggcgtcgggctgctcggcccgaccaccatctccaccgccacgtcctgccccaccgtcac 101631 Query: 1218 gctcgacctcaccgcgccgcactccctcctgcacccgtcg 1257 |||||||||||||||||||||||| ||||||||||||||| Sbjct: 101632 gctcgacctcaccgcgccgcactcgctcctgcacccgtcg 101671 Score = 165 bits (83), Expect = 8e-37 Identities = 113/123 (91%) Strand = Plus / Plus Query: 295 aaggcggagatgggcgaggtgagggaggagaacgagcgcctcaagacgctgctctcccac 354 |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | | | Sbjct: 100468 aaggcggagatgggcgaggtgagggaggagaacgagcggctcaagacgatgctcacacgc 100527 Query: 355 atcgtcagggactaccagtcgctccagatgcacttcctcgacgtcgtcaaggtcaaggag 414 |||||||| |||||| ||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 100528 atcgtcagcgactacaagtcgctgcacacgcacttcctcgacgtcgtcaaggtcaaggag 100587 Query: 415 caa 417 ||| Sbjct: 100588 caa 100590 Score = 145 bits (73), Expect = 8e-31 Identities = 106/117 (90%) Strand = Plus / Plus Query: 985 caggtgcagagatgcgtggatgacatgtcgatcctgatcacgacgtacgagggcacgcat 1044 |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 101360 caggtgcagagatgcgcggacgacatgtcgatcctgatcacgacgtacgagggcacgcac 101419 Query: 1045 agccacccgctcccgccggccgctgccgccatggcgtccaccacctccgccgcggcg 1101 ||||||||||| |||||||| || || || ||||||||||| || || ||||||||| Sbjct: 101420 agccacccgctgccgccggcggcggcggcgatggcgtccacaacgtcggccgcggcg 101476 Score = 141 bits (71), Expect = 1e-29 Identities = 95/103 (92%) Strand = Plus / Plus Query: 1472 tgacggacacgattgcgaaggcgatcacgtcggacccgagctttcaatcggtgctggcgg 1531 ||||||||||||| ||||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 101949 tgacggacacgatcgcgaaggcgatcacgtcggacccgagcttccagtcggttttggcgg 102008 Query: 1532 cggcgatcacttcgtacatggggcgcggcggcggggcggcggc 1574 |||||||||| || |||||||||||||||||||| |||||||| Sbjct: 102009 cggcgatcacgtcctacatggggcgcggcggcggcgcggcggc 102051 Score = 107 bits (54), Expect = 2e-19 Identities = 84/94 (89%) Strand = Plus / Plus Query: 873 gatgaacgatgggtgccaatggaggaagtacgggcagaagatctccaagggaaacccctg 932 ||||||||||||||| || ||| |||| ||||||||||| ||||| ||||| ||||| || Sbjct: 101124 gatgaacgatgggtgtcagtggcggaaatacgggcagaaaatctcaaaggggaacccttg 101183 Query: 933 cccgcgcgcctactaccgctgcaccgttgcaccc 966 |||||||||||| ||||| ||||||||||||||| Sbjct: 101184 cccgcgcgcctattaccgttgcaccgttgcaccc 101217 Score = 107 bits (54), Expect = 2e-19 Identities = 68/72 (94%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 1263 cgccgccgcggggtacgaatccag---ggcgctgccggcggcgtggagcagcgggtacct 1319 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 101692 cgccgccgcggggtacgagtccagcagggcgctgccggcggcgtggagcagcgggtacct 101751 Query: 1320 ggcgtacggcgg 1331 |||||||||||| Sbjct: 101752 ggcgtacggcgg 101763