BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem204b23 (1366 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001055524.1| Oryza sativa (japonica cultivar-group) Os03g... 311 4e-81 dbj|AK102357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 303 1e-78 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 163 2e-36 gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare str... 163 2e-36 ref|NM_001071226.1| Oryza sativa (japonica cultivar-group) Os10g... 105 5e-19 >ref|NM_001055524.1| Oryza sativa (japonica cultivar-group) Os03g0152000 (Os03g0152000) mRNA, complete cds Length = 1400 Score = 311 bits (157), Expect = 4e-81 Identities = 247/277 (89%) Strand = Plus / Plus Query: 439 aaggacgcccagctgaaggaggagaaggagcagaagcaaccgcccgaggagaagaaaccc 498 |||||||||||| ||| |||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 389 aaggacgcccaggcgaaagaggagaaggggaagaagcaaccgccagaggagaagaaaccc 448 Query: 499 aaagaggagacggtgctgctcaagattcgcctccactgcgacggctgcgccgaccgcatc 558 |||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 449 aaagaggaaacggtgctgctcaggattcgcctccactgcgatggctgcgccgaccgcatc 508 Query: 559 aggcgacgcatctacaagatcaaaggtgtgaaggatgtggtactggacagcaacggcaag 618 |||||||||||||||||||||||||| |||||||| |||||| ||||| |||| | |||| Sbjct: 509 aggcgacgcatctacaagatcaaaggggtgaaggaagtggtaatggacggcaatgccaag 568 Query: 619 gatgaggtgagggtcacgggcacgatggacgtcgccgccatgctggtttacctcaaggag 678 |||||||||| ||| ||||||| |||||||| | ||||||||| || |||| ||| Sbjct: 569 gatgaggtgaaggtgtcgggcacaatggacgtgccggccatgctgacctatctcaccgag 628 Query: 679 aagctcaaccgcaccgtggaggccgtggcacccggca 715 |||||||||||| |||||||||||||||| ||||||| Sbjct: 629 aagctcaaccgcgccgtggaggccgtggcgcccggca 665 Score = 248 bits (125), Expect = 5e-62 Identities = 179/197 (90%) Strand = Plus / Plus Query: 133 aggatggagttgcattgcgccggctgcgcgaagaaggtcaagaagtacatcaagcacctg 192 |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| || Sbjct: 128 aggatggagttgcattgcgccggctgcgcgcagaaggtcaagaagtccatcaagcacttg 187 Query: 193 cctggggtggagtcggtcgtggcggacgcggcggcgaacagggtcgtcgtggcggggacg 252 | |||||||||||||| | |||||||| |||| |||||| ||||||||||||||||||| Sbjct: 188 gccggggtggagtcggtggcggcggacgtggcgacgaacacggtcgtcgtggcggggacg 247 Query: 253 gccgacgcggccgcgctcaaggcgcggatcgaggccaagaccaataaggccgtcgagatc 312 ||||| |||||||||||||||||| |||||||||| |||||||| ||| |||||||| | Sbjct: 248 gccgaagcggccgcgctcaaggcgaggatcgaggcgaagaccaagaagcccgtcgaggtt 307 Query: 313 gtctccgccggcagcgg 329 |||||||||||| |||| Sbjct: 308 gtctccgccggcggcgg 324 Score = 105 bits (53), Expect = 5e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 1082 tcgacatggcgccggcgccgcagctgttcagcgacgagaaccccaacgcctgctccgtca 1141 |||||||| |||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 1053 tcgacatgtcgccggcgccgcagctgttcagcgacgagaaccccaacgcctgctcggtga 1112 Query: 1142 tgtga 1146 ||||| Sbjct: 1113 tgtga 1117 Score = 85.7 bits (43), Expect = 4e-13 Identities = 103/123 (83%) Strand = Plus / Plus Query: 801 cggcgacgacaagaagggcacaggcaaaggcatcgaggcggcgggcccgtccaaggcggc 860 ||||| ||||||||||| || |||||| ||||||||| || |||||||||| || || Sbjct: 736 cggcggcgacaagaaggacaaaggcaagagcatcgaggtcgccggcccgtccaccgccgc 795 Query: 861 tgctgccgcgttcatggcccctccgccggccgaggcgagcacgtaccacgtgtcgccata 920 || || |||| |||||| || |||||||||||||||||||||||||||| ||||| || Sbjct: 796 cgccgcggcgtccatggcgccggcgccggccgaggcgagcacgtaccacgtctcgccgta 855 Query: 921 cgg 923 ||| Sbjct: 856 cgg 858 >dbj|AK102357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091H19, full insert sequence Length = 1401 Score = 303 bits (153), Expect = 1e-78 Identities = 246/277 (88%) Strand = Plus / Plus Query: 439 aaggacgcccagctgaaggaggagaaggagcagaagcaaccgcccgaggagaagaaaccc 498 ||||||||| || ||| |||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 390 aaggacgcctaggcgaaagaggagaaggggaagaagcaaccgccagaggagaagaaaccc 449 Query: 499 aaagaggagacggtgctgctcaagattcgcctccactgcgacggctgcgccgaccgcatc 558 |||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 450 aaagaggaaacggtgctgctcaggattcgcctccactgcgatggctgcgccgaccgcatc 509 Query: 559 aggcgacgcatctacaagatcaaaggtgtgaaggatgtggtactggacagcaacggcaag 618 |||||||||||||||||||||||||| |||||||| |||||| ||||| |||| | |||| Sbjct: 510 aggcgacgcatctacaagatcaaaggggtgaaggaagtggtaatggacggcaatgccaag 569 Query: 619 gatgaggtgagggtcacgggcacgatggacgtcgccgccatgctggtttacctcaaggag 678 |||||||||| ||| ||||||| |||||||| | ||||||||| || |||| ||| Sbjct: 570 gatgaggtgaaggtgtcgggcacaatggacgtgccggccatgctgacctatctcaccgag 629 Query: 679 aagctcaaccgcaccgtggaggccgtggcacccggca 715 |||||||||||| |||||||||||||||| ||||||| Sbjct: 630 aagctcaaccgcgccgtggaggccgtggcgcccggca 666 Score = 248 bits (125), Expect = 5e-62 Identities = 179/197 (90%) Strand = Plus / Plus Query: 133 aggatggagttgcattgcgccggctgcgcgaagaaggtcaagaagtacatcaagcacctg 192 |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| || Sbjct: 129 aggatggagttgcattgcgccggctgcgcgcagaaggtcaagaagtccatcaagcacttg 188 Query: 193 cctggggtggagtcggtcgtggcggacgcggcggcgaacagggtcgtcgtggcggggacg 252 | |||||||||||||| | |||||||| |||| |||||| ||||||||||||||||||| Sbjct: 189 gccggggtggagtcggtggcggcggacgtggcgacgaacacggtcgtcgtggcggggacg 248 Query: 253 gccgacgcggccgcgctcaaggcgcggatcgaggccaagaccaataaggccgtcgagatc 312 ||||| |||||||||||||||||| |||||||||| |||||||| ||| |||||||| | Sbjct: 249 gccgaagcggccgcgctcaaggcgaggatcgaggcgaagaccaagaagcccgtcgaggtt 308 Query: 313 gtctccgccggcagcgg 329 |||||||||||| |||| Sbjct: 309 gtctccgccggcggcgg 325 Score = 105 bits (53), Expect = 5e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 1082 tcgacatggcgccggcgccgcagctgttcagcgacgagaaccccaacgcctgctccgtca 1141 |||||||| |||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 1054 tcgacatgtcgccggcgccgcagctgttcagcgacgagaaccccaacgcctgctcggtga 1113 Query: 1142 tgtga 1146 ||||| Sbjct: 1114 tgtga 1118 Score = 85.7 bits (43), Expect = 4e-13 Identities = 103/123 (83%) Strand = Plus / Plus Query: 801 cggcgacgacaagaagggcacaggcaaaggcatcgaggcggcgggcccgtccaaggcggc 860 ||||| ||||||||||| || |||||| ||||||||| || |||||||||| || || Sbjct: 737 cggcggcgacaagaaggacaaaggcaagagcatcgaggtcgccggcccgtccaccgccgc 796 Query: 861 tgctgccgcgttcatggcccctccgccggccgaggcgagcacgtaccacgtgtcgccata 920 || || |||| |||||| || |||||||||||||||||||||||||||| ||||| || Sbjct: 797 cgccgcggcgtccatggcgccggcgccggccgaggcgagcacgtaccacgtctcgccgta 856 Query: 921 cgg 923 ||| Sbjct: 857 cgg 859 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 163 bits (82), Expect = 2e-36 Identities = 121/134 (90%) Strand = Plus / Minus Query: 196 ggggtggagtcggtcgtggcggacgcggcggcgaacagggtcgtcgtggcggggacggcc 255 |||||||||||||| | |||||||| |||| |||||| |||||||||||||||||||||| Sbjct: 2849609 ggggtggagtcggtggcggcggacgtggcgacgaacacggtcgtcgtggcggggacggcc 2849550 Query: 256 gacgcggccgcgctcaaggcgcggatcgaggccaagaccaataaggccgtcgagatcgtc 315 || |||||||||||||||||| |||||||||| |||||||| ||| |||||||| | ||| Sbjct: 2849549 gaagcggccgcgctcaaggcgaggatcgaggcgaagaccaagaagcccgtcgaggttgtc 2849490 Query: 316 tccgccggcagcgg 329 ||||||||| |||| Sbjct: 2849489 tccgccggcggcgg 2849476 Score = 143 bits (72), Expect = 2e-30 Identities = 81/84 (96%) Strand = Plus / Minus Query: 503 aggagacggtgctgctcaagattcgcctccactgcgacggctgcgccgaccgcatcaggc 562 |||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 2849235 aggaaacggtgctgctcaggattcgcctccactgcgatggctgcgccgaccgcatcaggc 2849176 Query: 563 gacgcatctacaagatcaaaggtg 586 |||||||||||||||||||||||| Sbjct: 2849175 gacgcatctacaagatcaaaggtg 2849152 Score = 105 bits (53), Expect = 5e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 1082 tcgacatggcgccggcgccgcagctgttcagcgacgagaaccccaacgcctgctccgtca 1141 |||||||| |||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 2848513 tcgacatgtcgccggcgccgcagctgttcagcgacgagaaccccaacgcctgctcggtga 2848454 Query: 1142 tgtga 1146 ||||| Sbjct: 2848453 tgtga 2848449 Score = 99.6 bits (50), Expect = 3e-17 Identities = 110/130 (84%) Strand = Plus / Minus Query: 586 gtgaaggatgtggtactggacagcaacggcaaggatgaggtgagggtcacgggcacgatg 645 |||||||| |||||| ||||| |||| | |||||||||||||| ||| ||||||| ||| Sbjct: 2849030 gtgaaggaagtggtaatggacggcaatgccaaggatgaggtgaaggtgtcgggcacaatg 2848971 Query: 646 gacgtcgccgccatgctggtttacctcaaggagaagctcaaccgcaccgtggaggccgtg 705 ||||| | ||||||||| || |||| ||||||||||||||| |||||||||||||| Sbjct: 2848970 gacgtgccggccatgctgacctatctcaccgagaagctcaaccgcgccgtggaggccgtg 2848911 Query: 706 gcacccggca 715 || ||||||| Sbjct: 2848910 gcgcccggca 2848901 Score = 97.6 bits (49), Expect = 1e-16 Identities = 55/57 (96%) Strand = Plus / Minus Query: 133 aggatggagttgcattgcgccggctgcgcgaagaaggtcaagaagtacatcaagcac 189 |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 2849805 aggatggagttgcattgcgccggctgcgcgcagaaggtcaagaagtccatcaagcac 2849749 Score = 85.7 bits (43), Expect = 4e-13 Identities = 103/123 (83%) Strand = Plus / Minus Query: 801 cggcgacgacaagaagggcacaggcaaaggcatcgaggcggcgggcccgtccaaggcggc 860 ||||| ||||||||||| || |||||| ||||||||| || |||||||||| || || Sbjct: 2848830 cggcggcgacaagaaggacaaaggcaagagcatcgaggtcgccggcccgtccaccgccgc 2848771 Query: 861 tgctgccgcgttcatggcccctccgccggccgaggcgagcacgtaccacgtgtcgccata 920 || || |||| |||||| || |||||||||||||||||||||||||||| ||||| || Sbjct: 2848770 cgccgcggcgtccatggcgccggcgccggccgaggcgagcacgtaccacgtctcgccgta 2848711 Query: 921 cgg 923 ||| Sbjct: 2848710 cgg 2848708 Score = 85.7 bits (43), Expect = 4e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 439 aaggacgcccagctgaaggaggagaaggagcagaagcaaccgcccgaggagaagaaaccc 498 |||||||||||| ||| |||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 2849411 aaggacgcccaggcgaaagaggagaaggggaagaagcaaccgccagaggagaagaaaccc 2849352 Query: 499 aaagagg 505 ||||||| Sbjct: 2849351 aaagagg 2849345 >gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 163 bits (82), Expect = 2e-36 Identities = 121/134 (90%) Strand = Plus / Minus Query: 196 ggggtggagtcggtcgtggcggacgcggcggcgaacagggtcgtcgtggcggggacggcc 255 |||||||||||||| | |||||||| |||| |||||| |||||||||||||||||||||| Sbjct: 121454 ggggtggagtcggtggcggcggacgtggcgacgaacacggtcgtcgtggcggggacggcc 121395 Query: 256 gacgcggccgcgctcaaggcgcggatcgaggccaagaccaataaggccgtcgagatcgtc 315 || |||||||||||||||||| |||||||||| |||||||| ||| |||||||| | ||| Sbjct: 121394 gaagcggccgcgctcaaggcgaggatcgaggcgaagaccaagaagcccgtcgaggttgtc 121335 Query: 316 tccgccggcagcgg 329 ||||||||| |||| Sbjct: 121334 tccgccggcggcgg 121321 Score = 143 bits (72), Expect = 2e-30 Identities = 81/84 (96%) Strand = Plus / Minus Query: 503 aggagacggtgctgctcaagattcgcctccactgcgacggctgcgccgaccgcatcaggc 562 |||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 121080 aggaaacggtgctgctcaggattcgcctccactgcgatggctgcgccgaccgcatcaggc 121021 Query: 563 gacgcatctacaagatcaaaggtg 586 |||||||||||||||||||||||| Sbjct: 121020 gacgcatctacaagatcaaaggtg 120997 Score = 105 bits (53), Expect = 5e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 1082 tcgacatggcgccggcgccgcagctgttcagcgacgagaaccccaacgcctgctccgtca 1141 |||||||| |||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 120358 tcgacatgtcgccggcgccgcagctgttcagcgacgagaaccccaacgcctgctcggtga 120299 Query: 1142 tgtga 1146 ||||| Sbjct: 120298 tgtga 120294 Score = 99.6 bits (50), Expect = 3e-17 Identities = 110/130 (84%) Strand = Plus / Minus Query: 586 gtgaaggatgtggtactggacagcaacggcaaggatgaggtgagggtcacgggcacgatg 645 |||||||| |||||| ||||| |||| | |||||||||||||| ||| ||||||| ||| Sbjct: 120875 gtgaaggaagtggtaatggacggcaatgccaaggatgaggtgaaggtgtcgggcacaatg 120816 Query: 646 gacgtcgccgccatgctggtttacctcaaggagaagctcaaccgcaccgtggaggccgtg 705 ||||| | ||||||||| || |||| ||||||||||||||| |||||||||||||| Sbjct: 120815 gacgtgccggccatgctgacctatctcaccgagaagctcaaccgcgccgtggaggccgtg 120756 Query: 706 gcacccggca 715 || ||||||| Sbjct: 120755 gcgcccggca 120746 Score = 97.6 bits (49), Expect = 1e-16 Identities = 55/57 (96%) Strand = Plus / Minus Query: 133 aggatggagttgcattgcgccggctgcgcgaagaaggtcaagaagtacatcaagcac 189 |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 121650 aggatggagttgcattgcgccggctgcgcgcagaaggtcaagaagtccatcaagcac 121594 Score = 85.7 bits (43), Expect = 4e-13 Identities = 103/123 (83%) Strand = Plus / Minus Query: 801 cggcgacgacaagaagggcacaggcaaaggcatcgaggcggcgggcccgtccaaggcggc 860 ||||| ||||||||||| || |||||| ||||||||| || |||||||||| || || Sbjct: 120675 cggcggcgacaagaaggacaaaggcaagagcatcgaggtcgccggcccgtccaccgccgc 120616 Query: 861 tgctgccgcgttcatggcccctccgccggccgaggcgagcacgtaccacgtgtcgccata 920 || || |||| |||||| || |||||||||||||||||||||||||||| ||||| || Sbjct: 120615 cgccgcggcgtccatggcgccggcgccggccgaggcgagcacgtaccacgtctcgccgta 120556 Query: 921 cgg 923 ||| Sbjct: 120555 cgg 120553 Score = 85.7 bits (43), Expect = 4e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 439 aaggacgcccagctgaaggaggagaaggagcagaagcaaccgcccgaggagaagaaaccc 498 |||||||||||| ||| |||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 121256 aaggacgcccaggcgaaagaggagaaggggaagaagcaaccgccagaggagaagaaaccc 121197 Query: 499 aaagagg 505 ||||||| Sbjct: 121196 aaagagg 121190 >ref|NM_001071226.1| Oryza sativa (japonica cultivar-group) Os10g0440500 (Os10g0440500) mRNA, partial cds Length = 389 Score = 105 bits (53), Expect = 5e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 496 cccaaagaggagacggtgctgctcaagattcgcctccactgcgacggctgcgccgaccgc 555 |||||||||||||||||| ||||||||| |||||||||||||| || ||| ||||||| Sbjct: 301 cccaaagaggagacggtgacgctcaagatccgcctccactgcgagggatgcatcgaccgc 360 Query: 556 atcaggcgacgcatctacaagatcaaagg 584 |||| ||| |||||||||||||||||||| Sbjct: 361 atcaagcgccgcatctacaagatcaaagg 389