BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem203l04 (1374 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT834894.1| Oryza sativa (indica cultivar-group) cDNA clone:... 823 0.0 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 823 0.0 dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic D... 823 0.0 >emb|CT834894.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108E01, full insert sequence Length = 1272 Score = 823 bits (415), Expect = 0.0 Identities = 824/961 (85%), Gaps = 12/961 (1%) Strand = Plus / Plus Query: 148 ctgcgggccgccgccgccgtgcacgacggggccgcaactgcagccgccgtcgccgagctc 207 ||||||| |||||||| |||||||||||||| || || || | |||| |||||||| || Sbjct: 190 ctgcggggtgccgccgcggtgcacgacggggcggccaccgccgtcgccatcgccgagatc 249 Query: 208 cgccgcatctccaaggacgacccggacatccgcgcgcccctcgcggatgcaggagcggta 267 |||| | | |||||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 250 cgccacgccaccaaggacgacccggacatccgggcgccgctcgcggacgccggggcggtg 309 Query: 268 cccttcctcgccgcgcagcttacggcgccgtgcgccgcatccgaggacgcggcggccgcg 327 || ||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct: 310 ccgttcctcgccgcgcagctcacggcgccgtccgccgcctccgaggacgcggcggccgcg 369 Query: 328 ctcctcaacatatccatctccgcgcgggaacagctcatgtccacccccggcctcctcgac 387 || |||||||| |||||||||||||||| |||||||||||| ||||||| || || || Sbjct: 370 ctgctcaacatctccatctccgcgcgggggcagctcatgtccgcccccgggctgctggat 429 Query: 388 gccctcacggccgcgctccgagcggaggagtactccgccgcccaccacgccgcggccacc 447 || |||||||| |||||||| ||||| ||||||| |||||||||||||||||| |||||| Sbjct: 430 gctctcacggcggcgctccgggcggacgagtactgcgccgcccaccacgccgccgccacc 489 Query: 448 gtccacagcctcctctgcgtcgaggcctaccgccccatcataggcgccaagcgcccttta 507 || | ||||||||||||||||||||| |||||||| || | ||||||| ||| || || Sbjct: 490 gtgtatagcctcctctgcgtcgaggccaaccgccccgtcgtcggcgccaggcggccgttg 549 Query: 508 cttgcagcgctcgtctccctcctccgcgcggcgcccaacacccgcgcgaccaaggacacc 567 || || |||||||||||||||||||| |||||||||||||||||||| ||||||||| | Sbjct: 550 ctcgccgcgctcgtctccctcctccgggcggcgcccaacacccgcgccaccaaggacgcg 609 Query: 568 ctcaaggcgctcttcggcgtcgcgctctaccggctcaaccgcgccacgctcatcgagctc 627 |||||||||||||||| |||||||||| ||| || |||||||||||||||| ||| ||| Sbjct: 610 ctcaaggcgctcttcgccgtcgcgctccacccgcccaaccgcgccacgctcgtcggcctc 669 Query: 628 ggcgtcgtgcaggctctcttcgcgctcgtcatgacggacgggcggacgggcatcatcgag 687 |||| ||||||||| |||||||||||| ||||||||||||| |||| |||||||| ||| Sbjct: 670 ggcgccgtgcaggcgctcttcgcgctcatcatgacggacggccggagcggcatcatggag 729 Query: 688 gacgcgacggccgtggttgcgcaggtcgccgggtgcgtggagagcctggaggcgttcggt 747 ||||| || ||||| || ||||||||||||||||||| |||||||||||| |||||| Sbjct: 730 gacgccaccgccgtcgtcgcgcaggtcgccgggtgcgcggagagcctggacgcgttcacg 789 Query: 748 aggatgacaggggtgcggatcctcgtcgaccttgtcgagccggggggcgcagcgacggcg 807 |||||| | ||| |||| || ||||||||||| ||||||| || ||||| |||| | Sbjct: 790 aggatgtccgggctgcgcattctcgtcgacctcgtcgagcaaggtggcgcgtcgacacca 849 Query: 808 agggcgagagagaacgcggcagccgcgctgctcaacttgatcgtggcctgcggcgagcgg 867 || | || ||||||||||| ||||||||||||||| | |||||||| |||||||||| Sbjct: 850 agaacaagggagaacgcggcggccgcgctgctcaaccttgtcgtggccggcggcgagcgc 909 Query: 868 gcggtgaccgaagtgatcgcggtgggtggcgcggaggaggccgtgagggagctcgcggag 927 || ||| | || |||||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 910 gccgtggcggaggtgatcgcggtgggcggcgcggaggacgcggtgagggagctcgcggag 969 Query: 928 gacagcacggcgagcccgagggggaaggcgaaggcggaggcgctgctgagggcattggag 987 ||| |||||||||| ||||||||||||||||||||||| |||||||| |||| |||||| Sbjct: 970 gacgccacggcgagcgcgagggggaaggcgaaggcggagtcgctgctgcgggcgttggag 1029 Query: 988 ------ggcgggaggaggcgagactaccggctcgccgatttcttgaacgggctggtgcag 1041 |||| |||| ||||||| ||||||||||||| ||| ||||||||||||||||| Sbjct: 1030 tgcggcggcgcgaggcggcgagagcaccggctcgccgacttcctgaacgggctggtgcag 1089 Query: 1042 tcggacccctacatctcgtcgccatcgccggcgtcggcgtcgacgcacgggtaaaaggct 1101 || ||||| ||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 1090 tccgacccgtacatctcg------tcgccggcgtcggcgtcgacgcacgggtaaacggct 1143 Query: 1102 g 1102 | Sbjct: 1144 g 1144 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 823 bits (415), Expect = 0.0 Identities = 824/961 (85%), Gaps = 12/961 (1%) Strand = Plus / Minus Query: 148 ctgcgggccgccgccgccgtgcacgacggggccgcaactgcagccgccgtcgccgagctc 207 ||||||| |||||||| |||||||||||||| || || || | |||| |||||||| || Sbjct: 42115958 ctgcggggtgccgccgcggtgcacgacggggcggccaccgccgtcgccatcgccgagatc 42115899 Query: 208 cgccgcatctccaaggacgacccggacatccgcgcgcccctcgcggatgcaggagcggta 267 |||| | | |||||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 42115898 cgccacgccaccaaggacgacccggacatccgggcgccgctcgcggacgccggggcggtg 42115839 Query: 268 cccttcctcgccgcgcagcttacggcgccgtgcgccgcatccgaggacgcggcggccgcg 327 || ||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct: 42115838 ccgttcctcgccgcgcagctcacggcgccgtccgccgcctccgaggacgcggcggccgcg 42115779 Query: 328 ctcctcaacatatccatctccgcgcgggaacagctcatgtccacccccggcctcctcgac 387 || |||||||| |||||||||||||||| |||||||||||| ||||||| || || || Sbjct: 42115778 ctgctcaacatctccatctccgcgcgggggcagctcatgtccgcccccgggctgctggat 42115719 Query: 388 gccctcacggccgcgctccgagcggaggagtactccgccgcccaccacgccgcggccacc 447 || |||||||| |||||||| ||||| ||||||| |||||||||||||||||| |||||| Sbjct: 42115718 gctctcacggcggcgctccgggcggacgagtactgcgccgcccaccacgccgccgccacc 42115659 Query: 448 gtccacagcctcctctgcgtcgaggcctaccgccccatcataggcgccaagcgcccttta 507 || | ||||||||||||||||||||| |||||||| || | ||||||| ||| || || Sbjct: 42115658 gtgtatagcctcctctgcgtcgaggccaaccgccccgtcgtcggcgccaggcggccgttg 42115599 Query: 508 cttgcagcgctcgtctccctcctccgcgcggcgcccaacacccgcgcgaccaaggacacc 567 || || |||||||||||||||||||| |||||||||||||||||||| ||||||||| | Sbjct: 42115598 ctcgccgcgctcgtctccctcctccgggcggcgcccaacacccgcgccaccaaggacgcg 42115539 Query: 568 ctcaaggcgctcttcggcgtcgcgctctaccggctcaaccgcgccacgctcatcgagctc 627 |||||||||||||||| |||||||||| ||| || |||||||||||||||| ||| ||| Sbjct: 42115538 ctcaaggcgctcttcgccgtcgcgctccacccgcccaaccgcgccacgctcgtcggcctc 42115479 Query: 628 ggcgtcgtgcaggctctcttcgcgctcgtcatgacggacgggcggacgggcatcatcgag 687 |||| ||||||||| |||||||||||| ||||||||||||| |||| |||||||| ||| Sbjct: 42115478 ggcgccgtgcaggcgctcttcgcgctcatcatgacggacggccggagcggcatcatggag 42115419 Query: 688 gacgcgacggccgtggttgcgcaggtcgccgggtgcgtggagagcctggaggcgttcggt 747 ||||| || ||||| || ||||||||||||||||||| |||||||||||| |||||| Sbjct: 42115418 gacgccaccgccgtcgtcgcgcaggtcgccgggtgcgcggagagcctggacgcgttcacg 42115359 Query: 748 aggatgacaggggtgcggatcctcgtcgaccttgtcgagccggggggcgcagcgacggcg 807 |||||| | ||| |||| || ||||||||||| ||||||| || ||||| |||| | Sbjct: 42115358 aggatgtccgggctgcgcattctcgtcgacctcgtcgagcaaggtggcgcgtcgacacca 42115299 Query: 808 agggcgagagagaacgcggcagccgcgctgctcaacttgatcgtggcctgcggcgagcgg 867 || | || ||||||||||| ||||||||||||||| | |||||||| |||||||||| Sbjct: 42115298 agaacaagggagaacgcggcggccgcgctgctcaaccttgtcgtggccggcggcgagcgc 42115239 Query: 868 gcggtgaccgaagtgatcgcggtgggtggcgcggaggaggccgtgagggagctcgcggag 927 || ||| | || |||||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 42115238 gccgtggcggaggtgatcgcggtgggcggcgcggaggacgcggtgagggagctcgcggag 42115179 Query: 928 gacagcacggcgagcccgagggggaaggcgaaggcggaggcgctgctgagggcattggag 987 ||| |||||||||| ||||||||||||||||||||||| |||||||| |||| |||||| Sbjct: 42115178 gacgccacggcgagcgcgagggggaaggcgaaggcggagtcgctgctgcgggcgttggag 42115119 Query: 988 ------ggcgggaggaggcgagactaccggctcgccgatttcttgaacgggctggtgcag 1041 |||| |||| ||||||| ||||||||||||| ||| ||||||||||||||||| Sbjct: 42115118 tgcggcggcgcgaggcggcgagagcaccggctcgccgacttcctgaacgggctggtgcag 42115059 Query: 1042 tcggacccctacatctcgtcgccatcgccggcgtcggcgtcgacgcacgggtaaaaggct 1101 || ||||| ||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 42115058 tccgacccgtacatctcg------tcgccggcgtcggcgtcgacgcacgggtaaacggct 42115005 Query: 1102 g 1102 | Sbjct: 42115004 g 42115004 >dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1139B11 Length = 136548 Score = 823 bits (415), Expect = 0.0 Identities = 824/961 (85%), Gaps = 12/961 (1%) Strand = Plus / Minus Query: 148 ctgcgggccgccgccgccgtgcacgacggggccgcaactgcagccgccgtcgccgagctc 207 ||||||| |||||||| |||||||||||||| || || || | |||| |||||||| || Sbjct: 102763 ctgcggggtgccgccgcggtgcacgacggggcggccaccgccgtcgccatcgccgagatc 102704 Query: 208 cgccgcatctccaaggacgacccggacatccgcgcgcccctcgcggatgcaggagcggta 267 |||| | | |||||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 102703 cgccacgccaccaaggacgacccggacatccgggcgccgctcgcggacgccggggcggtg 102644 Query: 268 cccttcctcgccgcgcagcttacggcgccgtgcgccgcatccgaggacgcggcggccgcg 327 || ||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct: 102643 ccgttcctcgccgcgcagctcacggcgccgtccgccgcctccgaggacgcggcggccgcg 102584 Query: 328 ctcctcaacatatccatctccgcgcgggaacagctcatgtccacccccggcctcctcgac 387 || |||||||| |||||||||||||||| |||||||||||| ||||||| || || || Sbjct: 102583 ctgctcaacatctccatctccgcgcgggggcagctcatgtccgcccccgggctgctggat 102524 Query: 388 gccctcacggccgcgctccgagcggaggagtactccgccgcccaccacgccgcggccacc 447 || |||||||| |||||||| ||||| ||||||| |||||||||||||||||| |||||| Sbjct: 102523 gctctcacggcggcgctccgggcggacgagtactgcgccgcccaccacgccgccgccacc 102464 Query: 448 gtccacagcctcctctgcgtcgaggcctaccgccccatcataggcgccaagcgcccttta 507 || | ||||||||||||||||||||| |||||||| || | ||||||| ||| || || Sbjct: 102463 gtgtatagcctcctctgcgtcgaggccaaccgccccgtcgtcggcgccaggcggccgttg 102404 Query: 508 cttgcagcgctcgtctccctcctccgcgcggcgcccaacacccgcgcgaccaaggacacc 567 || || |||||||||||||||||||| |||||||||||||||||||| ||||||||| | Sbjct: 102403 ctcgccgcgctcgtctccctcctccgggcggcgcccaacacccgcgccaccaaggacgcg 102344 Query: 568 ctcaaggcgctcttcggcgtcgcgctctaccggctcaaccgcgccacgctcatcgagctc 627 |||||||||||||||| |||||||||| ||| || |||||||||||||||| ||| ||| Sbjct: 102343 ctcaaggcgctcttcgccgtcgcgctccacccgcccaaccgcgccacgctcgtcggcctc 102284 Query: 628 ggcgtcgtgcaggctctcttcgcgctcgtcatgacggacgggcggacgggcatcatcgag 687 |||| ||||||||| |||||||||||| ||||||||||||| |||| |||||||| ||| Sbjct: 102283 ggcgccgtgcaggcgctcttcgcgctcatcatgacggacggccggagcggcatcatggag 102224 Query: 688 gacgcgacggccgtggttgcgcaggtcgccgggtgcgtggagagcctggaggcgttcggt 747 ||||| || ||||| || ||||||||||||||||||| |||||||||||| |||||| Sbjct: 102223 gacgccaccgccgtcgtcgcgcaggtcgccgggtgcgcggagagcctggacgcgttcacg 102164 Query: 748 aggatgacaggggtgcggatcctcgtcgaccttgtcgagccggggggcgcagcgacggcg 807 |||||| | ||| |||| || ||||||||||| ||||||| || ||||| |||| | Sbjct: 102163 aggatgtccgggctgcgcattctcgtcgacctcgtcgagcaaggtggcgcgtcgacacca 102104 Query: 808 agggcgagagagaacgcggcagccgcgctgctcaacttgatcgtggcctgcggcgagcgg 867 || | || ||||||||||| ||||||||||||||| | |||||||| |||||||||| Sbjct: 102103 agaacaagggagaacgcggcggccgcgctgctcaaccttgtcgtggccggcggcgagcgc 102044 Query: 868 gcggtgaccgaagtgatcgcggtgggtggcgcggaggaggccgtgagggagctcgcggag 927 || ||| | || |||||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 102043 gccgtggcggaggtgatcgcggtgggcggcgcggaggacgcggtgagggagctcgcggag 101984 Query: 928 gacagcacggcgagcccgagggggaaggcgaaggcggaggcgctgctgagggcattggag 987 ||| |||||||||| ||||||||||||||||||||||| |||||||| |||| |||||| Sbjct: 101983 gacgccacggcgagcgcgagggggaaggcgaaggcggagtcgctgctgcgggcgttggag 101924 Query: 988 ------ggcgggaggaggcgagactaccggctcgccgatttcttgaacgggctggtgcag 1041 |||| |||| ||||||| ||||||||||||| ||| ||||||||||||||||| Sbjct: 101923 tgcggcggcgcgaggcggcgagagcaccggctcgccgacttcctgaacgggctggtgcag 101864 Query: 1042 tcggacccctacatctcgtcgccatcgccggcgtcggcgtcgacgcacgggtaaaaggct 1101 || ||||| ||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 101863 tccgacccgtacatctcg------tcgccggcgtcggcgtcgacgcacgggtaaacggct 101810 Query: 1102 g 1102 | Sbjct: 101809 g 101809