BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem203k01 (1380 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001050989.1| Oryza sativa (japonica cultivar-group) Os01g... 585 e-163 dbj|AK072280.1| Oryza sativa (japonica cultivar-group) cDNA clon... 585 e-163 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 571 e-159 dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic D... 571 e-159 gb|AY104155.1| Zea mays PCO077380 mRNA sequence 410 e-111 >ref|NM_001050989.1| Oryza sativa (japonica cultivar-group) Os01g0783500 (Os01g0783500) mRNA, complete cds Length = 1335 Score = 585 bits (295), Expect = e-163 Identities = 394/427 (92%) Strand = Plus / Plus Query: 540 gcggcctccgcggaggagctgcagaagaagcgggaggaggactttgatgtgttcacatcg 599 ||||| |||||||||||||||||||||||||||||||||||||| || | ||||| || Sbjct: 618 gcggcatccgcggaggagctgcagaagaagcgggaggaggacttcgacgccttcacgtcc 677 Query: 600 acaaaggcgcaggacctggcgcagccgctggtggacgcgcagatcccttttaagatccac 659 || |||||| |||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 678 accaaggcggaggacctggcgcagccgctggtcgacgcgcagatcccctttaagatccac 737 Query: 660 gtcgtgaaggatcacgacatgaaggagcgactctgcctcgaggccgagcgccttggcttg 719 ||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 738 gtcgtcaaggaccacgacatgaaggagcgcctctgcctcgaggccgagcgacttggcttg 797 Query: 720 tccgctatgatcatgggaagccgcggcttcggtgcctcgcggaagggtgggaaggggagg 779 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 798 tccgctatgatcatgggaagccgcggcttcggtgcctcgcggaagggcgggaaggggagg 857 Query: 780 ctcgggagtgttagtgattattgtgtgcatcactgtgtctgccctgttgtggtggttcgc 839 || |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 858 cttgggagtgttagtgattattgcgtgcatcactgtgtctgcccggttgtggttgttcgt 917 Query: 840 taccccgatgatgctgcaggtgccggtggggaggcagcaggggcaacagacgagctgcac 899 ||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 918 taccccgatgatgctgcaggtgccgacggggaggcagcagggccaacagatgagctgcac 977 Query: 900 actgtgcccgaggatgagcctgtgtatcacgatgcgcctgaggtgcacaaagataactga 959 |||||||| |||||||| ||||||||||| ||||| ||||| ||||| ||||| |||||| Sbjct: 978 actgtgcctgaggatgaacctgtgtatcatgatgcacctgatgtgcagaaagaaaactga 1037 Query: 960 ggcaatg 966 || |||| Sbjct: 1038 ggtaatg 1044 Score = 353 bits (178), Expect = 1e-93 Identities = 226/242 (93%) Strand = Plus / Plus Query: 244 cggccgcgatccagccctcctccccgcgctacttcttctccttgctcgccgtcaacaacg 303 |||| |||||||| ||| |||| ||||| ||||||||||||| |||||| | || ||||| Sbjct: 355 cggcggcgatccaccccacctcgccgcggtacttcttctcctcgctcgcgggcaccaacg 414 Query: 304 cctccccgcatcggcgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccg 363 |||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 415 cctccccgcaccggcgcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccg 474 Query: 364 tccagtgggccgtgcagaactacctccgccccggcgacgccgtcgtgctcctccacgtgc 423 ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 475 tccggtgggccgtgcagaactacctccgccccggggacgccgtcgtgctcctccacgtgc 534 Query: 424 gccccacctccgtgctctacggcgctgactggggctccatccccgtctccgtctccgacg 483 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 535 ggcccacctccgtgctctacggcgccgactggggctccatccccgtctccgtctccgacg 594 Query: 484 ac 485 || Sbjct: 595 ac 596 >dbj|AK072280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C18, full insert sequence Length = 1337 Score = 585 bits (295), Expect = e-163 Identities = 394/427 (92%) Strand = Plus / Plus Query: 540 gcggcctccgcggaggagctgcagaagaagcgggaggaggactttgatgtgttcacatcg 599 ||||| |||||||||||||||||||||||||||||||||||||| || | ||||| || Sbjct: 620 gcggcatccgcggaggagctgcagaagaagcgggaggaggacttcgacgccttcacgtcc 679 Query: 600 acaaaggcgcaggacctggcgcagccgctggtggacgcgcagatcccttttaagatccac 659 || |||||| |||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 680 accaaggcggaggacctggcgcagccgctggtcgacgcgcagatcccctttaagatccac 739 Query: 660 gtcgtgaaggatcacgacatgaaggagcgactctgcctcgaggccgagcgccttggcttg 719 ||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 740 gtcgtcaaggaccacgacatgaaggagcgcctctgcctcgaggccgagcgacttggcttg 799 Query: 720 tccgctatgatcatgggaagccgcggcttcggtgcctcgcggaagggtgggaaggggagg 779 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 800 tccgctatgatcatgggaagccgcggcttcggtgcctcgcggaagggcgggaaggggagg 859 Query: 780 ctcgggagtgttagtgattattgtgtgcatcactgtgtctgccctgttgtggtggttcgc 839 || |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 860 cttgggagtgttagtgattattgcgtgcatcactgtgtctgcccggttgtggttgttcgt 919 Query: 840 taccccgatgatgctgcaggtgccggtggggaggcagcaggggcaacagacgagctgcac 899 ||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 920 taccccgatgatgctgcaggtgccgacggggaggcagcagggccaacagatgagctgcac 979 Query: 900 actgtgcccgaggatgagcctgtgtatcacgatgcgcctgaggtgcacaaagataactga 959 |||||||| |||||||| ||||||||||| ||||| ||||| ||||| ||||| |||||| Sbjct: 980 actgtgcctgaggatgaacctgtgtatcatgatgcacctgatgtgcagaaagaaaactga 1039 Query: 960 ggcaatg 966 || |||| Sbjct: 1040 ggtaatg 1046 Score = 353 bits (178), Expect = 1e-93 Identities = 226/242 (93%) Strand = Plus / Plus Query: 244 cggccgcgatccagccctcctccccgcgctacttcttctccttgctcgccgtcaacaacg 303 |||| |||||||| ||| |||| ||||| ||||||||||||| |||||| | || ||||| Sbjct: 357 cggcggcgatccaccccacctcgccgcggtacttcttctcctcgctcgcgggcaccaacg 416 Query: 304 cctccccgcatcggcgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccg 363 |||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 417 cctccccgcaccggcgcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccg 476 Query: 364 tccagtgggccgtgcagaactacctccgccccggcgacgccgtcgtgctcctccacgtgc 423 ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 477 tccggtgggccgtgcagaactacctccgccccggggacgccgtcgtgctcctccacgtgc 536 Query: 424 gccccacctccgtgctctacggcgctgactggggctccatccccgtctccgtctccgacg 483 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 537 ggcccacctccgtgctctacggcgccgactggggctccatccccgtctccgtctccgacg 596 Query: 484 ac 485 || Sbjct: 597 ac 598 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 571 bits (288), Expect = e-159 Identities = 381/412 (92%) Strand = Plus / Minus Query: 540 gcggcctccgcggaggagctgcagaagaagcgggaggaggactttgatgtgttcacatcg 599 ||||| |||||||||||||||||||||||||||||||||||||| || | ||||| || Sbjct: 33194374 gcggcatccgcggaggagctgcagaagaagcgggaggaggacttcgacgccttcacgtcc 33194315 Query: 600 acaaaggcgcaggacctggcgcagccgctggtggacgcgcagatcccttttaagatccac 659 || |||||| |||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 33194314 accaaggcggaggacctggcgcagccgctggtcgacgcgcagatcccctttaagatccac 33194255 Query: 660 gtcgtgaaggatcacgacatgaaggagcgactctgcctcgaggccgagcgccttggcttg 719 ||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 33194254 gtcgtcaaggaccacgacatgaaggagcgcctctgcctcgaggccgagcgacttggcttg 33194195 Query: 720 tccgctatgatcatgggaagccgcggcttcggtgcctcgcggaagggtgggaaggggagg 779 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 33194194 tccgctatgatcatgggaagccgcggcttcggtgcctcgcggaagggcgggaaggggagg 33194135 Query: 780 ctcgggagtgttagtgattattgtgtgcatcactgtgtctgccctgttgtggtggttcgc 839 || |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 33194134 cttgggagtgttagtgattattgcgtgcatcactgtgtctgcccggttgtggttgttcgt 33194075 Query: 840 taccccgatgatgctgcaggtgccggtggggaggcagcaggggcaacagacgagctgcac 899 ||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 33194074 taccccgatgatgctgcaggtgccgacggggaggcagcagggccaacagatgagctgcac 33194015 Query: 900 actgtgcccgaggatgagcctgtgtatcacgatgcgcctgaggtgcacaaag 951 |||||||| |||||||| ||||||||||| ||||| ||||| ||||| |||| Sbjct: 33194014 actgtgcctgaggatgaacctgtgtatcatgatgcacctgatgtgcagaaag 33193963 Score = 353 bits (178), Expect = 1e-93 Identities = 226/242 (93%) Strand = Plus / Minus Query: 244 cggccgcgatccagccctcctccccgcgctacttcttctccttgctcgccgtcaacaacg 303 |||| |||||||| ||| |||| ||||| ||||||||||||| |||||| | || ||||| Sbjct: 33194637 cggcggcgatccaccccacctcgccgcggtacttcttctcctcgctcgcgggcaccaacg 33194578 Query: 304 cctccccgcatcggcgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccg 363 |||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 33194577 cctccccgcaccggcgcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccg 33194518 Query: 364 tccagtgggccgtgcagaactacctccgccccggcgacgccgtcgtgctcctccacgtgc 423 ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 33194517 tccggtgggccgtgcagaactacctccgccccggggacgccgtcgtgctcctccacgtgc 33194458 Query: 424 gccccacctccgtgctctacggcgctgactggggctccatccccgtctccgtctccgacg 483 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 33194457 ggcccacctccgtgctctacggcgccgactggggctccatccccgtctccgtctccgacg 33194398 Query: 484 ac 485 || Sbjct: 33194397 ac 33194396 >dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 571 bits (288), Expect = e-159 Identities = 381/412 (92%) Strand = Plus / Minus Query: 540 gcggcctccgcggaggagctgcagaagaagcgggaggaggactttgatgtgttcacatcg 599 ||||| |||||||||||||||||||||||||||||||||||||| || | ||||| || Sbjct: 131284 gcggcatccgcggaggagctgcagaagaagcgggaggaggacttcgacgccttcacgtcc 131225 Query: 600 acaaaggcgcaggacctggcgcagccgctggtggacgcgcagatcccttttaagatccac 659 || |||||| |||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 131224 accaaggcggaggacctggcgcagccgctggtcgacgcgcagatcccctttaagatccac 131165 Query: 660 gtcgtgaaggatcacgacatgaaggagcgactctgcctcgaggccgagcgccttggcttg 719 ||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 131164 gtcgtcaaggaccacgacatgaaggagcgcctctgcctcgaggccgagcgacttggcttg 131105 Query: 720 tccgctatgatcatgggaagccgcggcttcggtgcctcgcggaagggtgggaaggggagg 779 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131104 tccgctatgatcatgggaagccgcggcttcggtgcctcgcggaagggcgggaaggggagg 131045 Query: 780 ctcgggagtgttagtgattattgtgtgcatcactgtgtctgccctgttgtggtggttcgc 839 || |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 131044 cttgggagtgttagtgattattgcgtgcatcactgtgtctgcccggttgtggttgttcgt 130985 Query: 840 taccccgatgatgctgcaggtgccggtggggaggcagcaggggcaacagacgagctgcac 899 ||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 130984 taccccgatgatgctgcaggtgccgacggggaggcagcagggccaacagatgagctgcac 130925 Query: 900 actgtgcccgaggatgagcctgtgtatcacgatgcgcctgaggtgcacaaag 951 |||||||| |||||||| ||||||||||| ||||| ||||| ||||| |||| Sbjct: 130924 actgtgcctgaggatgaacctgtgtatcatgatgcacctgatgtgcagaaag 130873 Score = 353 bits (178), Expect = 1e-93 Identities = 226/242 (93%) Strand = Plus / Minus Query: 244 cggccgcgatccagccctcctccccgcgctacttcttctccttgctcgccgtcaacaacg 303 |||| |||||||| ||| |||| ||||| ||||||||||||| |||||| | || ||||| Sbjct: 131547 cggcggcgatccaccccacctcgccgcggtacttcttctcctcgctcgcgggcaccaacg 131488 Query: 304 cctccccgcatcggcgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccg 363 |||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 131487 cctccccgcaccggcgcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccg 131428 Query: 364 tccagtgggccgtgcagaactacctccgccccggcgacgccgtcgtgctcctccacgtgc 423 ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 131427 tccggtgggccgtgcagaactacctccgccccggggacgccgtcgtgctcctccacgtgc 131368 Query: 424 gccccacctccgtgctctacggcgctgactggggctccatccccgtctccgtctccgacg 483 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 131367 ggcccacctccgtgctctacggcgccgactggggctccatccccgtctccgtctccgacg 131308 Query: 484 ac 485 || Sbjct: 131307 ac 131306 >gb|AY104155.1| Zea mays PCO077380 mRNA sequence Length = 1011 Score = 410 bits (207), Expect = e-111 Identities = 369/423 (87%) Strand = Plus / Plus Query: 544 cctccgcggaggagctgcagaagaagcgggaggaggactttgatgtgttcacatcgacaa 603 |||||| |||||||||||||||||||||||||||||| | || | ||||| || || | Sbjct: 139 cctccgaggaggagctgcagaagaagcgggaggaggaatacgacgccttcacctctacca 198 Query: 604 aggcgcaggacctggcgcagccgctggtggacgcgcagatcccttttaagatccacgtcg 663 ||||||||||||| ||||||||||| || || || |||||||| || |||||||| |||| Sbjct: 199 aggcgcaggacctcgcgcagccgcttgtcgatgcccagatccccttcaagatccatgtcg 258 Query: 664 tgaaggatcacgacatgaaggagcgactctgcctcgaggccgagcgccttggcttgtccg 723 | ||||| ||||||||||||||||| |||||||||||||| |||||||||||| |||||| Sbjct: 259 tcaaggaccacgacatgaaggagcgcctctgcctcgaggctgagcgccttggcctgtccg 318 Query: 724 ctatgatcatgggaagccgcggcttcggtgcctcgcggaagggtgggaaggggaggctcg 783 ||||||||||||| |||||||| || || ||||| ||||| || || ||||||||||| | Sbjct: 319 ctatgatcatggggagccgcggttttggggcctctcggaaaggcggcaaggggaggcttg 378 Query: 784 ggagtgttagtgattattgtgtgcatcactgtgtctgccctgttgtggtggttcgctacc 843 |||||||||||||||| ||||| || |||||||| ||||| |||||||| |||||||||| Sbjct: 379 ggagtgttagtgattactgtgtacaccactgtgtatgccccgttgtggttgttcgctacc 438 Query: 844 ccgatgatgctgcaggtgccggtggggaggcagcaggggcaacagacgagctgcacactg 903 | ||||||||||||| |||| |||| || ||| ||||||| ||||| ||| ||||||||| Sbjct: 439 ctgatgatgctgcagatgccagtggagatgcatcaggggcgacagatgagttgcacactg 498 Query: 904 tgcccgaggatgagcctgtgtatcacgatgcgcctgaggtgcacaaagataactgaggca 963 | || ||||| || ||||| ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 499 taccagaggacgaacctgtttatcacgatgcgcctgaggtgcagaaagaaaactgaggca 558 Query: 964 atg 966 ||| Sbjct: 559 atg 561 Score = 109 bits (55), Expect = 3e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 402 gccgtcgtgctcctccacgtgcgccccacctccgtgctctacggcgctgactggggctcc 461 ||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 12 gccgtcgtgctgctccacgtgcgccccacctccgttctctacggcgccgactggggttcc 71 Query: 462 atccccgtctccgtc 476 ||||| ||||||||| Sbjct: 72 atcccggtctccgtc 86