BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem203a10 (1209 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT828652.1| Oryza sativa (indica cultivar-group) cDNA clone:... 250 1e-62 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 250 1e-62 dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic D... 250 1e-62 dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic D... 250 1e-62 emb|CT828651.1| Oryza sativa (indica cultivar-group) cDNA clone:... 196 1e-46 >emb|CT828652.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA029M10, full insert sequence Length = 1198 Score = 250 bits (126), Expect = 1e-62 Identities = 232/266 (87%), Gaps = 6/266 (2%) Strand = Plus / Minus Query: 131 aaaccctcacctctccatctcggcctcgtcgccggcggccgcctcctccgcctgtggagg 190 ||||||||||||||||||||||| |||||| |||||| |||||| || ||| |||| Sbjct: 865 aaaccctcacctctccatctcggtctcgtc---ggcggcggcctccgcctgctgcggagt 809 Query: 191 cggcggtggggatagctgggccgccgcgagcgcgtcggccagcgcgcgcatggccttgac 250 | || ||| ||||| || || |||||||||||||| || ||||||||||||||||| Sbjct: 808 tgacga---ggagagctgcgcggcggcgagcgcgtcggcgagggcgcgcatggccttgac 752 Query: 251 ctgcatctccagcgcggccacgtagtcggccgtctcctcgagcaggtccggtgccggcag 310 ||||||||||||||||||||||||||||||||||||||||||||| |||| || || || Sbjct: 751 ctgcatctccagcgcggccacgtagtcggccgtctcctcgagcagcgccggcgcggggag 692 Query: 311 cttccggcagcccgggacgagccggcccagcacacggagccgctccttcaccttcctctc 370 ||||||||| || |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 691 cttccggcatccggggacgaggcggcccagcacgcggaggcgctccttcaccttcctctc 632 Query: 371 cttcagcaccggcggctcgccggcgg 396 |||||||| ||| ||||||||||||| Sbjct: 631 cttcagcatcgggggctcgccggcgg 606 Score = 208 bits (105), Expect = 4e-50 Identities = 150/165 (90%) Strand = Plus / Minus Query: 470 gcggcggatcttgccgccggccttgatgagcacgcggcggcggcaggaggccgcgccggc 529 |||||||||||| ||||||||||||| |||||||||||| | | | || ||||||||||| Sbjct: 523 gcggcggatcttcccgccggccttgacgagcacgcggcgcctggacgacgccgcgccggc 464 Query: 530 cagcaggatggcgcggctccagcgcgactgcccgcgcgcggtgagcgccagcgccgagtc 589 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 463 cagcaggatggcgcggctccacctcgactgcccccgcgcggtgagcgccagcgccgagtc 404 Query: 590 ggccgccgccttcacggcgcgcggctgcggaggcgcgcccccgcc 634 ||||| |||||||| || ||||||||||| |||||||||||||| Sbjct: 403 cgccgcggccttcaccgcccgcggctgcggcggcgcgcccccgcc 359 Score = 91.7 bits (46), Expect = 6e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 640 cccgcgtcgcgcggagcgcgtccagcaggcgccggccgtagatcctctcctgcgtgccgc 699 ||||||| || || |||||||| ||||||||||| ||||||||||||||||||| ||||| Sbjct: 341 cccgcgtggcccgcagcgcgtcgagcaggcgccgcccgtagatcctctcctgcgcgccgc 282 Query: 700 tccgccacttggtc 713 ||| |||||||||| Sbjct: 281 tcctccacttggtc 268 Score = 85.7 bits (43), Expect = 4e-13 Identities = 59/63 (93%), Gaps = 1/63 (1%) Strand = Plus / Minus Query: 26 taccctcctcaaatcccaaaccccctcgcaataataatcccactaattaatcaccctcat 85 ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| || Sbjct: 1008 taccctcctcaaatcccaaaccctctcgcaataataat-ccactaattaatcgcccttat 950 Query: 86 ttt 88 ||| Sbjct: 949 ttt 947 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 250 bits (126), Expect = 1e-62 Identities = 232/266 (87%), Gaps = 6/266 (2%) Strand = Plus / Plus Query: 131 aaaccctcacctctccatctcggcctcgtcgccggcggccgcctcctccgcctgtggagg 190 ||||||||||||||||||||||| |||||| |||||| |||||| || ||| |||| Sbjct: 7902807 aaaccctcacctctccatctcggtctcgtc---ggcggcggcctccgcctgctgcggagt 7902863 Query: 191 cggcggtggggatagctgggccgccgcgagcgcgtcggccagcgcgcgcatggccttgac 250 | || ||| ||||| || || |||||||||||||| || ||||||||||||||||| Sbjct: 7902864 tgacga---ggagagctgcgcggcggcgagcgcgtcggcgagggcgcgcatggccttgac 7902920 Query: 251 ctgcatctccagcgcggccacgtagtcggccgtctcctcgagcaggtccggtgccggcag 310 ||||||||||||||||||||||||||||||||||||||||||||| |||| || || || Sbjct: 7902921 ctgcatctccagcgcggccacgtagtcggccgtctcctcgagcagcgccggcgcggggag 7902980 Query: 311 cttccggcagcccgggacgagccggcccagcacacggagccgctccttcaccttcctctc 370 ||||||||| || |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 7902981 cttccggcatccggggacgaggcggcccagcacgcggaggcgctccttcaccttcctctc 7903040 Query: 371 cttcagcaccggcggctcgccggcgg 396 |||||||| ||| ||||||||||||| Sbjct: 7903041 cttcagcatcgggggctcgccggcgg 7903066 Score = 208 bits (105), Expect = 4e-50 Identities = 150/165 (90%) Strand = Plus / Plus Query: 470 gcggcggatcttgccgccggccttgatgagcacgcggcggcggcaggaggccgcgccggc 529 |||||||||||| ||||||||||||| |||||||||||| | | | || ||||||||||| Sbjct: 7903149 gcggcggatcttcccgccggccttgacgagcacgcggcgcctggacgacgccgcgccggc 7903208 Query: 530 cagcaggatggcgcggctccagcgcgactgcccgcgcgcggtgagcgccagcgccgagtc 589 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 7903209 cagcaggatggcgcggctccacctcgactgcccccgcgcggtgagcgccagcgccgagtc 7903268 Query: 590 ggccgccgccttcacggcgcgcggctgcggaggcgcgcccccgcc 634 ||||| |||||||| || ||||||||||| |||||||||||||| Sbjct: 7903269 cgccgcggccttcaccgcccgcggctgcggcggcgcgcccccgcc 7903313 Score = 91.7 bits (46), Expect = 6e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 640 cccgcgtcgcgcggagcgcgtccagcaggcgccggccgtagatcctctcctgcgtgccgc 699 ||||||| || || |||||||| ||||||||||| ||||||||||||||||||| ||||| Sbjct: 7903331 cccgcgtggcccgcagcgcgtcgagcaggcgccgcccgtagatcctctcctgcgcgccgc 7903390 Query: 700 tccgccacttggtc 713 ||| |||||||||| Sbjct: 7903391 tcctccacttggtc 7903404 Score = 85.7 bits (43), Expect = 4e-13 Identities = 59/63 (93%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 26 taccctcctcaaatcccaaaccccctcgcaataataatcccactaattaatcaccctcat 85 ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| || Sbjct: 7902664 taccctcctcaaatcccaaaccctctcgcaataataat-ccactaattaatcgcccttat 7902722 Query: 86 ttt 88 ||| Sbjct: 7902723 ttt 7902725 >dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1066G12 Length = 136263 Score = 250 bits (126), Expect = 1e-62 Identities = 232/266 (87%), Gaps = 6/266 (2%) Strand = Plus / Plus Query: 131 aaaccctcacctctccatctcggcctcgtcgccggcggccgcctcctccgcctgtggagg 190 ||||||||||||||||||||||| |||||| |||||| |||||| || ||| |||| Sbjct: 97753 aaaccctcacctctccatctcggtctcgtc---ggcggcggcctccgcctgctgcggagt 97809 Query: 191 cggcggtggggatagctgggccgccgcgagcgcgtcggccagcgcgcgcatggccttgac 250 | || ||| ||||| || || |||||||||||||| || ||||||||||||||||| Sbjct: 97810 tgacga---ggagagctgcgcggcggcgagcgcgtcggcgagggcgcgcatggccttgac 97866 Query: 251 ctgcatctccagcgcggccacgtagtcggccgtctcctcgagcaggtccggtgccggcag 310 ||||||||||||||||||||||||||||||||||||||||||||| |||| || || || Sbjct: 97867 ctgcatctccagcgcggccacgtagtcggccgtctcctcgagcagcgccggcgcggggag 97926 Query: 311 cttccggcagcccgggacgagccggcccagcacacggagccgctccttcaccttcctctc 370 ||||||||| || |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 97927 cttccggcatccggggacgaggcggcccagcacgcggaggcgctccttcaccttcctctc 97986 Query: 371 cttcagcaccggcggctcgccggcgg 396 |||||||| ||| ||||||||||||| Sbjct: 97987 cttcagcatcgggggctcgccggcgg 98012 Score = 208 bits (105), Expect = 4e-50 Identities = 150/165 (90%) Strand = Plus / Plus Query: 470 gcggcggatcttgccgccggccttgatgagcacgcggcggcggcaggaggccgcgccggc 529 |||||||||||| ||||||||||||| |||||||||||| | | | || ||||||||||| Sbjct: 98095 gcggcggatcttcccgccggccttgacgagcacgcggcgcctggacgacgccgcgccggc 98154 Query: 530 cagcaggatggcgcggctccagcgcgactgcccgcgcgcggtgagcgccagcgccgagtc 589 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 98155 cagcaggatggcgcggctccacctcgactgcccccgcgcggtgagcgccagcgccgagtc 98214 Query: 590 ggccgccgccttcacggcgcgcggctgcggaggcgcgcccccgcc 634 ||||| |||||||| || ||||||||||| |||||||||||||| Sbjct: 98215 cgccgcggccttcaccgcccgcggctgcggcggcgcgcccccgcc 98259 Score = 91.7 bits (46), Expect = 6e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 640 cccgcgtcgcgcggagcgcgtccagcaggcgccggccgtagatcctctcctgcgtgccgc 699 ||||||| || || |||||||| ||||||||||| ||||||||||||||||||| ||||| Sbjct: 98277 cccgcgtggcccgcagcgcgtcgagcaggcgccgcccgtagatcctctcctgcgcgccgc 98336 Query: 700 tccgccacttggtc 713 ||| |||||||||| Sbjct: 98337 tcctccacttggtc 98350 Score = 85.7 bits (43), Expect = 4e-13 Identities = 59/63 (93%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 26 taccctcctcaaatcccaaaccccctcgcaataataatcccactaattaatcaccctcat 85 ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| || Sbjct: 97610 taccctcctcaaatcccaaaccctctcgcaataataat-ccactaattaatcgcccttat 97668 Query: 86 ttt 88 ||| Sbjct: 97669 ttt 97671 >dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1008C01 Length = 144141 Score = 250 bits (126), Expect = 1e-62 Identities = 232/266 (87%), Gaps = 6/266 (2%) Strand = Plus / Plus Query: 131 aaaccctcacctctccatctcggcctcgtcgccggcggccgcctcctccgcctgtggagg 190 ||||||||||||||||||||||| |||||| |||||| |||||| || ||| |||| Sbjct: 9119 aaaccctcacctctccatctcggtctcgtc---ggcggcggcctccgcctgctgcggagt 9175 Query: 191 cggcggtggggatagctgggccgccgcgagcgcgtcggccagcgcgcgcatggccttgac 250 | || ||| ||||| || || |||||||||||||| || ||||||||||||||||| Sbjct: 9176 tgacga---ggagagctgcgcggcggcgagcgcgtcggcgagggcgcgcatggccttgac 9232 Query: 251 ctgcatctccagcgcggccacgtagtcggccgtctcctcgagcaggtccggtgccggcag 310 ||||||||||||||||||||||||||||||||||||||||||||| |||| || || || Sbjct: 9233 ctgcatctccagcgcggccacgtagtcggccgtctcctcgagcagcgccggcgcggggag 9292 Query: 311 cttccggcagcccgggacgagccggcccagcacacggagccgctccttcaccttcctctc 370 ||||||||| || |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 9293 cttccggcatccggggacgaggcggcccagcacgcggaggcgctccttcaccttcctctc 9352 Query: 371 cttcagcaccggcggctcgccggcgg 396 |||||||| ||| ||||||||||||| Sbjct: 9353 cttcagcatcgggggctcgccggcgg 9378 Score = 208 bits (105), Expect = 4e-50 Identities = 150/165 (90%) Strand = Plus / Plus Query: 470 gcggcggatcttgccgccggccttgatgagcacgcggcggcggcaggaggccgcgccggc 529 |||||||||||| ||||||||||||| |||||||||||| | | | || ||||||||||| Sbjct: 9461 gcggcggatcttcccgccggccttgacgagcacgcggcgcctggacgacgccgcgccggc 9520 Query: 530 cagcaggatggcgcggctccagcgcgactgcccgcgcgcggtgagcgccagcgccgagtc 589 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 9521 cagcaggatggcgcggctccacctcgactgcccccgcgcggtgagcgccagcgccgagtc 9580 Query: 590 ggccgccgccttcacggcgcgcggctgcggaggcgcgcccccgcc 634 ||||| |||||||| || ||||||||||| |||||||||||||| Sbjct: 9581 cgccgcggccttcaccgcccgcggctgcggcggcgcgcccccgcc 9625 Score = 91.7 bits (46), Expect = 6e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 640 cccgcgtcgcgcggagcgcgtccagcaggcgccggccgtagatcctctcctgcgtgccgc 699 ||||||| || || |||||||| ||||||||||| ||||||||||||||||||| ||||| Sbjct: 9643 cccgcgtggcccgcagcgcgtcgagcaggcgccgcccgtagatcctctcctgcgcgccgc 9702 Query: 700 tccgccacttggtc 713 ||| |||||||||| Sbjct: 9703 tcctccacttggtc 9716 Score = 85.7 bits (43), Expect = 4e-13 Identities = 59/63 (93%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 26 taccctcctcaaatcccaaaccccctcgcaataataatcccactaattaatcaccctcat 85 ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| || Sbjct: 8976 taccctcctcaaatcccaaaccctctcgcaataataat-ccactaattaatcgcccttat 9034 Query: 86 ttt 88 ||| Sbjct: 9035 ttt 9037 >emb|CT828651.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI020P06, full insert sequence Length = 763 Score = 196 bits (99), Expect = 1e-46 Identities = 199/231 (86%), Gaps = 6/231 (2%) Strand = Plus / Minus Query: 131 aaaccctcacctctccatctcggcctcgtcgccggcggccgcctcctccgcctgtggagg 190 ||||||||||||||||||||||| |||||| |||||| |||||| || ||| |||| Sbjct: 491 aaaccctcacctctccatctcggtctcgtc---ggcggcggcctccgcctgctgcggagt 435 Query: 191 cggcggtggggatagctgggccgccgcgagcgcgtcggccagcgcgcgcatggccttgac 250 | || ||| ||||| || || |||||||||||||| || ||||||||||||||||| Sbjct: 434 tgacga---ggagagctgcgcggcggcgagcgcgtcggcgagggcgcgcatggccttgac 378 Query: 251 ctgcatctccagcgcggccacgtagtcggccgtctcctcgagcaggtccggtgccggcag 310 ||||||||||||||||||||||||||||||||||||||||||||| |||| || || || Sbjct: 377 ctgcatctccagcgcggccacgtagtcggccgtctcctcgagcagcgccggcgcggggag 318 Query: 311 cttccggcagcccgggacgagccggcccagcacacggagccgctccttcac 361 ||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 317 cttccggcatccggggacgaggcggcccagcacgcggaggcgctccttcac 267 Score = 85.7 bits (43), Expect = 4e-13 Identities = 59/63 (93%), Gaps = 1/63 (1%) Strand = Plus / Minus Query: 26 taccctcctcaaatcccaaaccccctcgcaataataatcccactaattaatcaccctcat 85 ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| || Sbjct: 634 taccctcctcaaatcccaaaccctctcgcaataataat-ccactaattaatcgcccttat 576 Query: 86 ttt 88 ||| Sbjct: 575 ttt 573